BLASTX nr result

ID: Chrysanthemum21_contig00016184 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00016184
         (368 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]      72   5e-13

>gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]
          Length = 216

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 48/115 (41%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = +3

Query: 21  LDEQSVDVPRKRKVYFYLLYFSCXXXXXXXXXXTTCKYPLKPDYYIEFSLPGFEKEPANI 200
           ++ Q V +PRKRK  F+L YFS           T   YPLKP   I   +P    +  N 
Sbjct: 48  VNNQRVPLPRKRKACFFLSYFSFLILYLAFLLVTAFTYPLKPVCNISHIIPLDGAKTEN- 106

Query: 201 TEEMKQSVNLYLKLQNRNRLASALYDD-LNITMFYLPSSNTSTYFASTIVPGFYQ 362
                +S NL L+  NRN L S  YD  LNI+++Y+ SSN S YFA T  PGF Q
Sbjct: 107 -----ESFNLVLEFINRNPLISVSYDSFLNISVYYISSSNVS-YFAETTAPGFDQ 155


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