BLASTX nr result

ID: Chrysanthemum21_contig00015917 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015917
         (433 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI11848.1| Ribosomal protein S35, mitochondrial [Cynara card...    67   3e-10
ref|XP_023748715.1| uncharacterized protein LOC111896969 [Lactuc...    65   2e-09
ref|XP_023770378.1| uncharacterized protein LOC111919001 [Lactuc...    65   2e-09

>gb|KVI11848.1| Ribosomal protein S35, mitochondrial [Cynara cardunculus var.
           scolymus]
          Length = 366

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +2

Query: 29  NATKGGNEGDIDWGSELTWSSGLTKDHFDGEVVGE 133
           ++TKGGNEGDIDWGSE TWSS  TK+HFDGEVVG+
Sbjct: 41  SSTKGGNEGDIDWGSETTWSSTFTKEHFDGEVVGQ 75


>ref|XP_023748715.1| uncharacterized protein LOC111896969 [Lactuca sativa]
 gb|PLY96177.1| hypothetical protein LSAT_8X69520 [Lactuca sativa]
          Length = 360

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 34/59 (57%), Positives = 36/59 (61%), Gaps = 16/59 (27%)
 Frame = +2

Query: 2   TNSRATHHKNATKG----------------GNEGDIDWGSELTWSSGLTKDHFDGEVVG 130
           TNSRAT  K+ T                  GNEGDIDWGS  TWSSGLTK+HFDGEVVG
Sbjct: 13  TNSRATQLKSITNSLAYNFNLSNRFLSTNKGNEGDIDWGSASTWSSGLTKEHFDGEVVG 71


>ref|XP_023770378.1| uncharacterized protein LOC111919001 [Lactuca sativa]
 gb|PLY80410.1| hypothetical protein LSAT_8X112440 [Lactuca sativa]
          Length = 361

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 34/59 (57%), Positives = 37/59 (62%), Gaps = 16/59 (27%)
 Frame = +2

Query: 2   TNSRATHHKN----------------ATKGGNEGDIDWGSELTWSSGLTKDHFDGEVVG 130
           TNSRAT  K+                +T  GNEGDIDWGS  TWSSGLTK+HFDGEVVG
Sbjct: 13  TNSRATQLKSIRNSLAYSFSLSNRFLSTNKGNEGDIDWGSASTWSSGLTKEHFDGEVVG 71


Top