BLASTX nr result

ID: Chrysanthemum21_contig00015885 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015885
         (384 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023741060.1| F-box protein At5g46170-like [Lactuca sativa...    54   6e-06

>ref|XP_023741060.1| F-box protein At5g46170-like [Lactuca sativa]
 ref|XP_023741062.1| F-box protein At5g46170-like [Lactuca sativa]
 ref|XP_023741063.1| F-box protein At5g46170-like [Lactuca sativa]
 gb|PLY68265.1| hypothetical protein LSAT_3X113520 [Lactuca sativa]
          Length = 325

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = -2

Query: 131 IREMKNSEKYDVADDSSSFSCLPDEIVLQILSKLVDFKTLCLC 3
           +R +K S   D ADDSSS + LPDEI+LQI++K++DFK+LC+C
Sbjct: 1   MRNLKKSRDGD-ADDSSSINRLPDEIILQIINKIIDFKSLCVC 42


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