BLASTX nr result

ID: Chrysanthemum21_contig00015762 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015762
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93819.1| DNA-binding, integrase-type [Cynara cardunculus v...    97   3e-21
ref|XP_021996726.1| methyl-CpG-binding domain-containing protein...    85   9e-17
gb|KVH93818.1| hypothetical protein Ccrd_004118 [Cynara carduncu...    84   3e-16
ref|XP_023762981.1| methyl-CpG-binding domain-containing protein...    75   4e-13
gb|OTG03930.1| hypothetical protein HannXRQ_Chr12g0356741 [Helia...    60   5e-09

>gb|KVH93819.1| DNA-binding, integrase-type [Cynara cardunculus var. scolymus]
          Length = 322

 Score = 96.7 bits (239), Expect = 3e-21
 Identities = 50/76 (65%), Positives = 55/76 (72%), Gaps = 4/76 (5%)
 Frame = +1

Query: 112 PSSEEGEPTKGVNEEVLENPITPPPEVVTKPVAEEA----APVTKVEVGEPTASENGCSS 279
           P  E  +P K VNEEVLENP+TPPPE VTK V E A     PVTKVE G  TA+ENGC  
Sbjct: 247 PIEEVAKPAKEVNEEVLENPLTPPPEEVTKVVDETAIDDSVPVTKVEAGGATAAENGCPV 306

Query: 280 VEANEAKPSWEEIKIE 327
           VE +EA+PSWEEIKIE
Sbjct: 307 VEVSEAQPSWEEIKIE 322


>ref|XP_021996726.1| methyl-CpG-binding domain-containing protein 11-like [Helianthus
           annuus]
 gb|OTG03932.1| putative DNA-binding domain-containing protein [Helianthus annuus]
          Length = 314

 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 54/96 (56%), Positives = 59/96 (61%), Gaps = 20/96 (20%)
 Frame = +1

Query: 100 IPKVPSSEE---------------GEPTK---GVNEEVLENPITPPP-EVVTKPVAEEAA 222
           IPKVP SEE               GE       VNEEVLENPITPPP EV+T+P  EEA 
Sbjct: 221 IPKVPLSEEVSNPVTEQVEKQELKGEEAAKDVNVNEEVLENPITPPPKEVITEPALEEAV 280

Query: 223 PVTKVEVGEPTASENGCSSVE-ANEAKPSWEEIKIE 327
           PVT  E    TA+ENGCS  E A+E KP+WEEIKIE
Sbjct: 281 PVT--EAAGETAAENGCSVAEAASEVKPTWEEIKIE 314


>gb|KVH93818.1| hypothetical protein Ccrd_004118 [Cynara cardunculus var. scolymus]
          Length = 434

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 49/77 (63%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
 Frame = -2

Query: 329 YSIFISSHEGLASLASTDEQPFSDAVGSPTSTFVTGAAS----SATGLVTTSGGGVMGFS 162
           YSIFISS EG ASL ST  QPFS AV  P ST VTG  S    S+T LVT+SGGGV GFS
Sbjct: 190 YSIFISSQEGWASLTSTTGQPFSAAVAPPASTLVTGTESSIAVSSTTLVTSSGGGVSGFS 249

Query: 161 STSSFTPFVGSPSSDDG 111
           STSS T F G  +S  G
Sbjct: 250 STSSLTSFAGLATSSIG 266


>ref|XP_023762981.1| methyl-CpG-binding domain-containing protein 11-like isoform X1
           [Lactuca sativa]
 ref|XP_023762986.1| methyl-CpG-binding domain-containing protein 11-like isoform X2
           [Lactuca sativa]
 gb|PLY98486.1| hypothetical protein LSAT_5X95060 [Lactuca sativa]
          Length = 423

 Score = 75.5 bits (184), Expect = 4e-13
 Identities = 46/84 (54%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = +1

Query: 103 PKVPSSEEGEPTKGVNEEVLENPITPPPEVVTKPVAEE-------AAPVTKVEV--GEPT 255
           P++P  +E  P K VNEE LENP TPPPE  TKP  EE       A P TKVE   G   
Sbjct: 345 PEIPLVDE--PAKEVNEEALENPKTPPPENATKPANEEPEPVVKDAVPATKVEAGGGGGA 402

Query: 256 ASENGCSSVEANEAKPSWEEIKIE 327
           A+ENGC      E KPSWEEIKIE
Sbjct: 403 AAENGC---PVAEEKPSWEEIKIE 423


>gb|OTG03930.1| hypothetical protein HannXRQ_Chr12g0356741 [Helianthus annuus]
          Length = 113

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +1

Query: 121 EEGEPTKGVNEEVLENPITPPP-EVVTKPVAEEAAPVTKVEVGEPTASENGC 273
           EE      VNEE+LENPITPPP EV+T+P  EEA PVT  E    TA+ENGC
Sbjct: 55  EEAAKDVNVNEELLENPITPPPEEVITEPALEEAVPVT--EAAGETAAENGC 104


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