BLASTX nr result

ID: Chrysanthemum21_contig00015744 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015744
         (749 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_016476674.1| PREDICTED: uncharacterized RING finger prote...    58   6e-06

>ref|XP_016476674.1| PREDICTED: uncharacterized RING finger protein P8B7.15c-like
           [Nicotiana tabacum]
          Length = 468

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
 Frame = +1

Query: 256 EYVDDQALIPKCAFVVICRFPRFPSKPIV---LFQETADEE---EDSKTSVAED----KQ 405
           +YVD  ALIPK   V+ICR P  P  PIV   L +   D+    E++ T V  +    K 
Sbjct: 56  DYVDQDALIPKNTSVLICRVPGLPRLPIVIPCLTEPKLDQAQMCEENNTVVKGESIAAKN 115

Query: 406 LYGTDFDYFWEDVFEAPKVTPLRLGN-----HANPLSKTQVLANTAALDRPQITXXXXXX 570
            +  D+D F +DV+  PK+ P + GN       N ++  +       +D P +       
Sbjct: 116 YHNIDYDDFGDDVYAIPKLIPNQSGNPVLNAPTNSINDEETKIKN-LIDTPDLGRHLHSS 174

Query: 571 XXXXKDR--YEWLKPPTGYV 624
                 R   EW KPP GYV
Sbjct: 175 IGYGFGRGGMEWKKPPRGYV 194


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