BLASTX nr result

ID: Chrysanthemum21_contig00015604 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015604
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00753.1| Arginine repressor C-terminal-like domain-contain...    63   4e-09
ref|XP_021977342.1| DNA topoisomerase 2-like [Helianthus annuus]...    63   4e-09
ref|XP_023759895.1| DNA topoisomerase 2 [Lactuca sativa]               60   7e-08
gb|PLY88472.1| hypothetical protein LSAT_1X105720 [Lactuca sativa]     60   7e-08
ref|XP_022005320.1| DNA topoisomerase 2-like [Helianthus annuus]...    59   1e-07

>gb|KVI00753.1| Arginine repressor C-terminal-like domain-containing protein
           [Cynara cardunculus var. scolymus]
          Length = 1484

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +2

Query: 194 NYYPNVAKFAIECPEDDNNALKKRCVIELAACMGNSVKAELDGTHFSPKTFKD 352
           ++ P+++KF +EC EDD  AL K+ V++LA C+G SVK ELDG    PKTF+D
Sbjct: 219 SFKPDLSKFGMECLEDDVVALMKKRVVDLAGCLGKSVKVELDGKRVPPKTFED 271


>ref|XP_021977342.1| DNA topoisomerase 2-like [Helianthus annuus]
 gb|OTG37224.1| putative topoisomerase II [Helianthus annuus]
          Length = 1499

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +2

Query: 194 NYYPNVAKFAIECPEDDNNALKKRCVIELAACMGNSVKAELDGTHFSPKTFKD 352
           ++ P+++KF +EC EDD  AL K+ V++LA C+G SVK ELDG    PKTF+D
Sbjct: 219 SFKPDLSKFGMECLEDDVVALMKKRVVDLAGCLGKSVKVELDGKRVPPKTFED 271


>ref|XP_023759895.1| DNA topoisomerase 2 [Lactuca sativa]
          Length = 1508

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = +2

Query: 194 NYYPNVAKFAIECPEDDNNALKKRCVIELAACMGNSVKAELDGTHFSPKTFKD 352
           ++ P++ KF +EC E D  AL K+ V++LA C+G SVK ELDG    PKTF+D
Sbjct: 220 SFKPDLTKFGMECLEADVVALMKKRVVDLAGCLGKSVKVELDGKRVPPKTFED 272


>gb|PLY88472.1| hypothetical protein LSAT_1X105720 [Lactuca sativa]
          Length = 1508

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = +2

Query: 194 NYYPNVAKFAIECPEDDNNALKKRCVIELAACMGNSVKAELDGTHFSPKTFKD 352
           ++ P++ KF +EC E D  AL K+ V++LA C+G SVK ELDG    PKTF+D
Sbjct: 220 SFKPDLTKFGMECLEADVVALMKKRVVDLAGCLGKSVKVELDGKRVPPKTFED 272


>ref|XP_022005320.1| DNA topoisomerase 2-like [Helianthus annuus]
 gb|OTF98638.1| putative DNA topoisomerase 2 [Helianthus annuus]
          Length = 1488

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +2

Query: 194 NYYPNVAKFAIECPEDDNNALKKRCVIELAACMGNSVKAELDGTHFSPKTFKD 352
           ++ P++ KF +EC EDD  AL K+ V++LA C+G +VK EL+G    PKTF+D
Sbjct: 206 SFKPDLKKFGMECLEDDVVALMKKRVVDLAGCLGKTVKVELNGKRVPPKTFED 258


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