BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015382
         (2578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022010421.1| DNA-directed RNA polymerase 2B, chloroplasti...  1414   0.0  
ref|XP_023728323.1| DNA-directed RNA polymerase 2, chloroplastic...  1363   0.0  
gb|PLY78062.1| hypothetical protein LSAT_4X174081 [Lactuca sativa]   1361   0.0  
ref|XP_010660553.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1240   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1238   0.0  
ref|XP_024183439.1| DNA-directed RNA polymerase 2B, chloroplasti...  1228   0.0  
ref|XP_021816789.1| DNA-directed RNA polymerase 2B, chloroplasti...  1225   0.0  
ref|XP_023870355.1| DNA-directed RNA polymerase 2B, chloroplasti...  1222   0.0  
ref|XP_007214918.1| DNA-directed RNA polymerase 2, chloroplastic...  1221   0.0  
ref|XP_021690796.1| DNA-directed RNA polymerase 2B, chloroplasti...  1221   0.0  
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1219   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1219   0.0  
ref|XP_021905220.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme...  1218   0.0  
ref|XP_012088094.1| DNA-directed RNA polymerase 2B, chloroplasti...  1218   0.0  
gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]     1218   0.0  
ref|XP_017975629.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1217   0.0  
emb|CBI27412.3| unnamed protein product, partial [Vitis vinifera]    1216   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1216   0.0  
ref|XP_022728124.1| DNA-directed RNA polymerase 2B, chloroplasti...  1214   0.0  
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1214   0.0  

>ref|XP_022010421.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
            [Helianthus annuus]
 gb|OTF93770.1| putative DNA-directed RNA polymerase 2B [Helianthus annuus]
          Length = 1054

 Score = 1414 bits (3660), Expect = 0.0
 Identities = 710/818 (86%), Positives = 739/818 (90%), Gaps = 19/818 (2%)
 Frame = -1

Query: 2578 NDMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAV 2399
            +DMCEQKLAPNLPYMKSLFLGWFEPL K I+ DQ++C+ GK RAAYAP+FDLLPADKMAV
Sbjct: 240  SDMCEQKLAPNLPYMKSLFLGWFEPLCKRIDHDQQLCRQGKLRAAYAPYFDLLPADKMAV 299

Query: 2398 ITMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTE 2219
            ITMHKIMGL+MTG ENGCAR V+A  ++GEAIEQEIRIHNFLE                E
Sbjct: 300  ITMHKIMGLIMTGGENGCARVVAASCSIGEAIEQEIRIHNFLEKTRTKKAAKGVKQE--E 357

Query: 2218 EVPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQ 2039
            +V D V+KEQE LHKKVTNLMKKQKL  VGRIVKGHD SKPW Q VKAQVGS LIELLLQ
Sbjct: 358  KVSD-VSKEQEELHKKVTNLMKKQKLQVVGRIVKGHDASKPWSQPVKAQVGSHLIELLLQ 416

Query: 2038 SAYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKH 1859
            SAYIQP ADQSGG MPPDIRPAFVHTFRTS KEG K GRRYGVIECDPSVRKGLERASKH
Sbjct: 417  SAYIQPSADQSGGDMPPDIRPAFVHTFRTSSKEGQKTGRRYGVIECDPSVRKGLERASKH 476

Query: 1858 VVMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDT 1679
            VVMPYMPMLIPPV WTGYDKGAYLFLPSY+MRIHGAKQQR+VLKRTPKENLQPVFDALDT
Sbjct: 477  VVMPYMPMLIPPVKWTGYDKGAYLFLPSYIMRIHGAKQQREVLKRTPKENLQPVFDALDT 536

Query: 1678 LGNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXX 1499
            LGNTKWRVNKRVLAVVDRIWS+GG +AGLVDR DIPLPEKPDTEDEEQLT          
Sbjct: 537  LGNTKWRVNKRVLAVVDRIWSNGGRLAGLVDRHDIPLPEKPDTEDEEQLTKWKWKVKKVK 596

Query: 1498 KENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 1319
            KENRE HSQRCDVELKLTVARK+KDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL
Sbjct: 597  KENRERHSQRCDVELKLTVARKMKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 656

Query: 1318 EFAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR------- 1160
            EFAEGRPLGSSGLRWLKIH+ANLFAGGVDKLSLEGRIAFTESHL+DIFDSADR       
Sbjct: 657  EFAEGRPLGSSGLRWLKIHLANLFAGGVDKLSLEGRIAFTESHLDDIFDSADRPLDGGRW 716

Query: 1159 ------------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAV 1016
                         CINLAEALRS SPET+ISYIPVHQDGSCNGLQHYAALGRDKLGASAV
Sbjct: 717  WLNAEDPFQCLAVCINLAEALRSASPETVISYIPVHQDGSCNGLQHYAALGRDKLGASAV 776

Query: 1015 NLVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSV 836
            NLVEGERPADVYS IAARVLD+VKRDA+LD VSF DAK+ARLLINQVDRKLVKQTVMTSV
Sbjct: 777  NLVEGERPADVYSGIAARVLDIVKRDAQLDTVSFSDAKHARLLINQVDRKLVKQTVMTSV 836

Query: 835  YGVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGD 656
            YGVTYIGARDQIKRRLQERSN+ ADDAE+FGAACYAAKITLAALGEMFEGARNIMNWLGD
Sbjct: 837  YGVTYIGARDQIKRRLQERSNIDADDAELFGAACYAAKITLAALGEMFEGARNIMNWLGD 896

Query: 655  CAKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFP 476
            CAK+IASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFP
Sbjct: 897  CAKLIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFP 956

Query: 475  PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPIL 296
            PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPIL
Sbjct: 957  PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPIL 1016

Query: 295  ENLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            ENLLESFQ SFPT+SFPP+P+RGDFDLSDVLESSYFFN
Sbjct: 1017 ENLLESFQTSFPTVSFPPLPDRGDFDLSDVLESSYFFN 1054


>ref|XP_023728323.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like
            [Lactuca sativa]
          Length = 1034

 Score = 1363 bits (3529), Expect = 0.0
 Identities = 681/821 (82%), Positives = 727/821 (88%), Gaps = 22/821 (2%)
 Frame = -1

Query: 2578 NDMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAV 2399
            +DMCEQKLAPNLPYMKSLFLGWFEPL K IE DQ +C+ GKH+AAYAP+FDLLP+DKMAV
Sbjct: 215  SDMCEQKLAPNLPYMKSLFLGWFEPLCKKIEQDQALCRKGKHKAAYAPYFDLLPSDKMAV 274

Query: 2398 ITMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTE 2219
            ITMHK+MGL+MTG ENGCAR VSA  +VGEAIEQEIRIH FLE                +
Sbjct: 275  ITMHKVMGLIMTGGENGCARVVSASCSVGEAIEQEIRIHKFLEKTKTKKAAKAAKSEENK 334

Query: 2218 EVPDI--VTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELL 2045
            +V D   V KEQEGLHKKV NLMKK KL  VG IVKG+DDSKPW Q VKAQVGSRLIELL
Sbjct: 335  KVSDSDDVKKEQEGLHKKVKNLMKKGKLQVVGHIVKGYDDSKPWTQPVKAQVGSRLIELL 394

Query: 2044 LQSAYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERAS 1865
            LQSAYIQPPADQ G   PPDIRPAFVHT RTSVKEG K GRRYGVIECDPSVRKGLERAS
Sbjct: 395  LQSAYIQPPADQLGDT-PPDIRPAFVHTLRTSVKEGQKTGRRYGVIECDPSVRKGLERAS 453

Query: 1864 KHVVMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDAL 1685
            +HVV+PYMPMLIPPV WTGYDKGAYLFLPS++MR HGAKQQR+V+K+TPKENLQPV +AL
Sbjct: 454  RHVVIPYMPMLIPPVKWTGYDKGAYLFLPSFIMRTHGAKQQREVIKKTPKENLQPVLEAL 513

Query: 1684 DTLGNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXX 1505
            DTLGNTKWRVNKRVL+VVDRIWS+GG +AGLVDR DIPLPEKPDTEDEE+L         
Sbjct: 514  DTLGNTKWRVNKRVLSVVDRIWSNGGCLAGLVDRHDIPLPEKPDTEDEEELKKWKWKVKK 573

Query: 1504 XXKENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRG 1325
              KENRE HSQRCDVELKLTVARK+KDEAGFFYPHNLDFRGRAYPM PHLNHLGSDLCRG
Sbjct: 574  VKKENRERHSQRCDVELKLTVARKMKDEAGFFYPHNLDFRGRAYPMPPHLNHLGSDLCRG 633

Query: 1324 ILEFAEGRPLGSSGLRWLKIHVANLFA-GGVDKLSLEGRIAFTESHLNDIFDSADRX--- 1157
            ILEFAEGR LGSSGLRWLKIH+ANL+A GGVDKLS EGRI FTESHLNDIFDSADR    
Sbjct: 634  ILEFAEGRALGSSGLRWLKIHLANLYAVGGVDKLSREGRIDFTESHLNDIFDSADRPLDG 693

Query: 1156 ----------------CINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGA 1025
                            CINLAEALRSPSP T++SYIPVHQDGSCNGLQHYAALGRDKLGA
Sbjct: 694  DRWWLNAEDPFQCLAVCINLAEALRSPSPHTVVSYIPVHQDGSCNGLQHYAALGRDKLGA 753

Query: 1024 SAVNLVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVM 845
            +AVNLVEGERPADVYS IAARVL++VKRDAELDP SFPDAK+ARLLINQVDRKLVKQTVM
Sbjct: 754  TAVNLVEGERPADVYSGIAARVLEIVKRDAELDPDSFPDAKHARLLINQVDRKLVKQTVM 813

Query: 844  TSVYGVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNW 665
            TSVYGVT+IGARDQIKRRLQERS+++ADDA++F AACYAAKITLAALGEMFEGARNIMNW
Sbjct: 814  TSVYGVTFIGARDQIKRRLQERSDISADDAQLFAAACYAAKITLAALGEMFEGARNIMNW 873

Query: 664  LGDCAKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRT 485
            LGDCA +IA EN+PVRWTTPLGLPVVQPYR++GRHLVSTSLQVLTLQRETEKVMVRRQRT
Sbjct: 874  LGDCAMLIACENEPVRWTTPLGLPVVQPYRIHGRHLVSTSLQVLTLQRETEKVMVRRQRT 933

Query: 484  AFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQT 305
            AFPPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQT
Sbjct: 934  AFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQT 993

Query: 304  PILENLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            PILENLLESFQ+SFPTLSFPP+P+RGDFDLSDVLESSYFFN
Sbjct: 994  PILENLLESFQESFPTLSFPPLPDRGDFDLSDVLESSYFFN 1034


>gb|PLY78062.1| hypothetical protein LSAT_4X174081 [Lactuca sativa]
          Length = 818

 Score = 1361 bits (3522), Expect = 0.0
 Identities = 680/819 (83%), Positives = 725/819 (88%), Gaps = 22/819 (2%)
 Frame = -1

Query: 2572 MCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVIT 2393
            MCEQKLAPNLPYMKSLFLGWFEPL K IE DQ +C+ GKH+AAYAP+FDLLP+DKMAVIT
Sbjct: 1    MCEQKLAPNLPYMKSLFLGWFEPLCKKIEQDQALCRKGKHKAAYAPYFDLLPSDKMAVIT 60

Query: 2392 MHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEEV 2213
            MHK+MGL+MTG ENGCAR VSA  +VGEAIEQEIRIH FLE                ++V
Sbjct: 61   MHKVMGLIMTGGENGCARVVSASCSVGEAIEQEIRIHKFLEKTKTKKAAKAAKSEENKKV 120

Query: 2212 PDI--VTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQ 2039
             D   V KEQEGLHKKV NLMKK KL  VG IVKG+DDSKPW Q VKAQVGSRLIELLLQ
Sbjct: 121  SDSDDVKKEQEGLHKKVKNLMKKGKLQVVGHIVKGYDDSKPWTQPVKAQVGSRLIELLLQ 180

Query: 2038 SAYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKH 1859
            SAYIQPPADQ G   PPDIRPAFVHT RTSVKEG K GRRYGVIECDPSVRKGLERAS+H
Sbjct: 181  SAYIQPPADQLGDT-PPDIRPAFVHTLRTSVKEGQKTGRRYGVIECDPSVRKGLERASRH 239

Query: 1858 VVMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDT 1679
            VV+PYMPMLIPPV WTGYDKGAYLFLPS++MR HGAKQQR+V+K+TPKENLQPV +ALDT
Sbjct: 240  VVIPYMPMLIPPVKWTGYDKGAYLFLPSFIMRTHGAKQQREVIKKTPKENLQPVLEALDT 299

Query: 1678 LGNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXX 1499
            LGNTKWRVNKRVL+VVDRIWS+GG +AGLVDR DIPLPEKPDTEDEE+L           
Sbjct: 300  LGNTKWRVNKRVLSVVDRIWSNGGCLAGLVDRHDIPLPEKPDTEDEEELKKWKWKVKKVK 359

Query: 1498 KENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 1319
            KENRE HSQRCDVELKLTVARK+KDEAGFFYPHNLDFRGRAYPM PHLNHLGSDLCRGIL
Sbjct: 360  KENRERHSQRCDVELKLTVARKMKDEAGFFYPHNLDFRGRAYPMPPHLNHLGSDLCRGIL 419

Query: 1318 EFAEGRPLGSSGLRWLKIHVANLFA-GGVDKLSLEGRIAFTESHLNDIFDSADRX----- 1157
            EFAEGR LGSSGLRWLKIH+ANL+A GGVDKLS EGRI FTESHLNDIFDSADR      
Sbjct: 420  EFAEGRALGSSGLRWLKIHLANLYAVGGVDKLSREGRIDFTESHLNDIFDSADRPLDGDR 479

Query: 1156 --------------CINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASA 1019
                          CINLAEALRSPSP T++SYIPVHQDGSCNGLQHYAALGRDKLGA+A
Sbjct: 480  WWLNAEDPFQCLAVCINLAEALRSPSPHTVVSYIPVHQDGSCNGLQHYAALGRDKLGATA 539

Query: 1018 VNLVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTS 839
            VNLVEGERPADVYS IAARVL++VKRDAELDP SFPDAK+ARLLINQVDRKLVKQTVMTS
Sbjct: 540  VNLVEGERPADVYSGIAARVLEIVKRDAELDPDSFPDAKHARLLINQVDRKLVKQTVMTS 599

Query: 838  VYGVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLG 659
            VYGVT+IGARDQIKRRLQERS+++ADDA++F AACYAAKITLAALGEMFEGARNIMNWLG
Sbjct: 600  VYGVTFIGARDQIKRRLQERSDISADDAQLFAAACYAAKITLAALGEMFEGARNIMNWLG 659

Query: 658  DCAKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAF 479
            DCA +IA EN+PVRWTTPLGLPVVQPYR++GRHLVSTSLQVLTLQRETEKVMVRRQRTAF
Sbjct: 660  DCAMLIACENEPVRWTTPLGLPVVQPYRIHGRHLVSTSLQVLTLQRETEKVMVRRQRTAF 719

Query: 478  PPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPI 299
            PPNFVHSLDGSHMMMTAVACK AGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPI
Sbjct: 720  PPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPI 779

Query: 298  LENLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            LENLLESFQ+SFPTLSFPP+P+RGDFDLSDVLESSYFFN
Sbjct: 780  LENLLESFQESFPTLSFPPLPDRGDFDLSDVLESSYFFN 818


>ref|XP_010660553.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera]
 emb|CBI16911.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1035

 Score = 1240 bits (3208), Expect = 0.0
 Identities = 610/817 (74%), Positives = 684/817 (83%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AI  +QE+C+ GK++AAYAP+FD LPAD M+VI
Sbjct: 222  DMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVI 281

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK++GLLMTG E+G  R V A   +G+AIEQE+RIHNFLE                  
Sbjct: 282  TMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGF 341

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
             P  V  EQE L KKVTNLMKKQKLHA  +IVKGHD+SKPW    KA+VGSRLIELL+Q+
Sbjct: 342  DP--VIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQT 399

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPP D      PPDIRPAFVHTF+T ++E  K GRR+GVIECDP V+KGLER ++H+
Sbjct: 400  AYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHM 459

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PY+PML+PP+ WTGYDKGA+LFLPSYVMR HGA+QQR+ +KR P+  L+PVF+AL+TL
Sbjct: 460  VIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTL 519

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNTKWR+NKR+  VVDRIW+ GG +A LVDR+D+PLPEKPDTEDE QL           K
Sbjct: 520  GNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKK 579

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
             N E HSQRCD+ELKL VARK+KDE GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 580  ANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 639

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLGSSGL WLKIH+ANLFAGGVDKLS EGRI FTE+HL+DIFDSADR        
Sbjct: 640  FAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWW 699

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINL+EALRS SPET IS+IPVHQDGSCNGLQHYAALGRD+LGA+AVN
Sbjct: 700  LNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVN 759

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IAARVLD++KRDAE DP  FPDA  AR+LINQVDRKLVKQTVMTSVY
Sbjct: 760  LVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVY 819

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER N  ADD E+FGAACYAAKITL ALGEMF+ AR+IM+WLGDC
Sbjct: 820  GVTYIGARDQIKRRLKER-NAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDC 878

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR  GRHL+ TSLQVLTLQRETE +MV+RQRTAFPP
Sbjct: 879  AKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPP 938

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHAC+VDEMNR+LREKFV+LY+TPILE
Sbjct: 939  NFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILE 998

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQQSFP L FPP+PERGDFDL +VLES YFFN
Sbjct: 999  NLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1238 bits (3204), Expect = 0.0
 Identities = 608/817 (74%), Positives = 689/817 (84%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL   I A+QE+C+ GK+R AYAP+FD LPA+ M+VI
Sbjct: 220  DMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQLPAEMMSVI 279

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTG E+G  R V A   +GEAIE E+RIH FLE                  
Sbjct: 280  TMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKTRKKTDKDKKADGGES- 338

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              D V KEQ+ L KKVT+LMKKQKL  V +IVKG DDSKPW Q  +A+VGSRLIELL+Q+
Sbjct: 339  --DPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAKVGSRLIELLMQT 396

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPP DQ     PPDIRPAF H+ +T  KE  K  RRYGVIECDP VRKGLER ++H+
Sbjct: 397  AYIQPPVDQLADG-PPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGLERTARHM 455

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PPVNWTGYDKGAYLFLPSYVMR HGA+QQR+ +KR P++ L+PVF+ALDTL
Sbjct: 456  VIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTL 515

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNTKWRVNKRVL+VVDRIW+SGG +A LVDR+D+P+PE+PDTEDE ++           K
Sbjct: 516  GNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKVKAAKK 575

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            EN E HSQRCD+ELKL VAR++KDE GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 576  ENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 635

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLG SGL+WLKIH+ANL+AGGVDKLS EGRIAFTE+HL+DIFDSADR        
Sbjct: 636  FAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWW 695

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINL+EALRS SPET IS++PVHQDGSCNGLQHYAALGRDKLGA+AVN
Sbjct: 696  LNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVN 755

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IAARVLD+++RDAE DP + P+A +AR+LINQVDRKLVKQTVMTSVY
Sbjct: 756  LVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTVMTSVY 815

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER NV ADD+E+FGA+CYAAK TL ALGEMFE AR+IM+WLGDC
Sbjct: 816  GVTYIGARDQIKRRLKER-NVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSWLGDC 874

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR  GRHL+ TSLQVLTLQRET+KVMV+RQRTAFPP
Sbjct: 875  AKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 934

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHAC++DEMN+ILREKFVELY+ PILE
Sbjct: 935  NFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMNKILREKFVELYEKPILE 994

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQQSFPTL+FPP+PERGDFDL +VL+S YFFN
Sbjct: 995  NLLESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>ref|XP_024183439.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
            isoform X1 [Rosa chinensis]
 gb|PRQ53261.1| putative DNA-directed RNA polymerase [Rosa chinensis]
          Length = 1015

 Score = 1228 bits (3176), Expect = 0.0
 Identities = 606/817 (74%), Positives = 681/817 (83%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AI  +Q++C+ GK++AAY P+ D LPAD M+VI
Sbjct: 206  DMCEQKLAPNLPYMKSLFLGWFEPLCNAITKEQDLCRQGKNKAAYGPYMDKLPADMMSVI 265

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTGE   C R VSA   +GEAIEQE+RIHNFLE               +  
Sbjct: 266  TMHKLMGLLMTGEHGSC-RVVSAACTIGEAIEQEVRIHNFLERTKKKKVGKDQETGES-- 322

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              D + KE E L+KKVTNLMKKQK+ AV  IV+GHDDSK W Q  KA+VGSRLIELL Q+
Sbjct: 323  --DAMMKENEKLNKKVTNLMKKQKMQAVRHIVRGHDDSKGWSQEAKAKVGSRLIELLTQT 380

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            A+IQPPA+Q G   P DIRPAFVHTFRT  K+   + RRYGVIECDP V KGLER ++H+
Sbjct: 381  AFIQPPANQLGDG-PLDIRPAFVHTFRTVSKDAKNSSRRYGVIECDPLVLKGLERTARHM 439

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PP+NWTGYDKG + FLPSYVMRIHGAKQQR+ +KRTP+E L+PVF ALDTL
Sbjct: 440  VIPYMPMLVPPLNWTGYDKGGHFFLPSYVMRIHGAKQQREAVKRTPREQLEPVFKALDTL 499

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNT+WRVNKRVL VVDRIW+SGG +A LVDR D+PLPEKPDTEDE  L           K
Sbjct: 500  GNTRWRVNKRVLNVVDRIWASGGRLADLVDRSDVPLPEKPDTEDETLLKKWKWKVTSVKK 559

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            ENRE H+QRCD+ELKL VARK+KDE GF++PHNLDFRGRAYPMHP+LNHLGSDLCRGIL 
Sbjct: 560  ENRERHAQRCDIELKLAVARKMKDEEGFYFPHNLDFRGRAYPMHPYLNHLGSDLCRGILA 619

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLG SGLRWLKIH+ANL+AGGVDKLSLEGR+AFTE+HL+DIFDS DR        
Sbjct: 620  FAEGRPLGKSGLRWLKIHLANLYAGGVDKLSLEGRLAFTENHLDDIFDSVDRPLEGRRWW 679

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINL+EALRS SPET IS+IPVHQDGSCNGLQHYAALGRDKLGA AVN
Sbjct: 680  LKAEDPFQCLAVCINLSEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAGAVN 739

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IAARVL +++ DA+ DP  FPDA  AR+L+NQVDRKLVKQTVMTSVY
Sbjct: 740  LVAGEKPADVYSGIAARVLAIMQSDAQKDPEVFPDALRARVLVNQVDRKLVKQTVMTSVY 799

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER  + +DDAE+FG ACYAAK+TL ALGEMFE AR+IM+WLGDC
Sbjct: 800  GVTYIGARDQIKRRLKERGAI-SDDAEVFGCACYAAKVTLTALGEMFEAARSIMSWLGDC 858

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASEN+PVRWTTPLGLPVVQPYR +GRHL+ TSLQ+LTLQRETEK+MV+RQRTAFPP
Sbjct: 859  AKIIASENEPVRWTTPLGLPVVQPYRKFGRHLIKTSLQILTLQRETEKIMVKRQRTAFPP 918

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTAVACK+AGLNFAGVHDSYWTHAC+VD MNRILREKFVELY+TPILE
Sbjct: 919  NFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILE 978

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
             L ESFQQSFP L+FPP+PERGDFDL DVLES YFFN
Sbjct: 979  RLSESFQQSFPELTFPPLPERGDFDLRDVLESPYFFN 1015


>ref|XP_021816789.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Prunus
            avium]
          Length = 1024

 Score = 1225 bits (3170), Expect = 0.0
 Identities = 604/817 (73%), Positives = 681/817 (83%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AI+ +Q++C+ GK++AAYAP+ D LPAD M+VI
Sbjct: 214  DMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKAAYAPYIDQLPADMMSVI 273

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTG E+G  R V+A   +GEAIEQE+RIH FLE               +  
Sbjct: 274  TMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVNKDQENGES-- 331

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              D   KEQE L+KKVTNLMKKQKL AV  IV  HD SK W    +A+VGSRLIELL Q+
Sbjct: 332  --DAAMKEQEKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQT 389

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            A+IQPPADQ     PPDIRPAFVHTFRT  K+     RRYGVIECDP V KGLE+ ++H+
Sbjct: 390  AFIQPPADQLADG-PPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHM 448

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PP+NWTGYDKG Y FLPSYVMRIHGA+QQR+ +KRTP+E L+PVF ALDTL
Sbjct: 449  VIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDTL 508

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNT+WRVNKRVL VVDRIW++GG +A LVDR+D+PLPE+PDTEDE  L           K
Sbjct: 509  GNTRWRVNKRVLNVVDRIWATGGRLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKK 568

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            EN E HSQRCD+ELKL VARK+KDE GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGI+E
Sbjct: 569  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIVE 628

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            F EGRPLG SGL WLKIH+ANL+AGGVDKLSLEGRIAFTE+HL+DIFDS D+        
Sbjct: 629  FQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWW 688

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINLAEALRS SPET IS+IPVHQDGSCNGLQHYAALGRDKLGA++VN
Sbjct: 689  LKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVN 748

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IA RVL++++RDA+ DPV FP+A  A+LLINQVDRKLVKQTVMTSVY
Sbjct: 749  LVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVY 808

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER ++ +DDAEIFG ACYAAKITL ALGEMFE AR IM+WLG+C
Sbjct: 809  GVTYIGARDQIKRRLKERGSI-SDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGEC 867

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR +GRHL+ TSLQVLTLQRETEKVMV+RQRTAFPP
Sbjct: 868  AKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPP 927

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLD SHMMMTA+ACK+AGL+FAGVHDSYWTHAC+VDEMN+ILREKFVELY+TPILE
Sbjct: 928  NFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREKFVELYETPILE 987

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQQSFP L FPP+PERGDFDL DVLES YFFN
Sbjct: 988  NLLESFQQSFPALMFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_023870355.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
            [Quercus suber]
 gb|POE88831.1| dna-directed rna polymerase 2b, chloroplastic/mitochondrial [Quercus
            suber]
          Length = 1027

 Score = 1222 bits (3161), Expect = 0.0
 Identities = 603/817 (73%), Positives = 686/817 (83%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AIE +QE+C+ GK++AAYAP+ + LP D M+VI
Sbjct: 215  DMCEQKLAPNLPYMKSLFLGWFEPLRDAIEKEQELCRRGKNKAAYAPYINQLPPDMMSVI 274

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTG E+G AR V A   +G+A+EQE+RIH FLE                + 
Sbjct: 275  TMHKLMGLLMTGGEHGSARVVLAACAIGDAVEQEVRIHKFLEKTKKKKGDKDKENDGEDS 334

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              + V  +QE L KKVT L+KKQKL A  +IVKG DDSKPW Q  KA+VGSRLIELL+Q+
Sbjct: 335  --NAVVMDQEKLRKKVTTLIKKQKLLAARQIVKGQDDSKPWGQDAKAKVGSRLIELLMQT 392

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPPA+Q     PPDIRPAF+H+ +T +KEG K  RR+G+IECDP V KGLER ++H+
Sbjct: 393  AYIQPPANQLADG-PPDIRPAFLHSLKTVMKEGKKISRRFGIIECDPLVIKGLERTARHM 451

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PY+PML+PPV WTGYDKG +LFLPSYVMRI GA+QQR+ +KR P++ L+PVF+ALDTL
Sbjct: 452  VIPYVPMLVPPVKWTGYDKGGHLFLPSYVMRIRGARQQREAVKRAPRKQLEPVFEALDTL 511

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNTKWRVNKRVL+VVDRIW+SGG +A LVDR+DIPLP++PDTEDE QL           K
Sbjct: 512  GNTKWRVNKRVLSVVDRIWASGGRLADLVDRNDIPLPDQPDTEDEAQLKKWRWKVKSVKK 571

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            ENRE HSQRCD+ELKL VARK+KDE GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 572  ENRERHSQRCDIELKLAVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 631

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLG SGLRWLKIH ANL+AGGVDKLS EGR+ FTE+HL+DIFDSADR        
Sbjct: 632  FAEGRPLGKSGLRWLKIHFANLYAGGVDKLSHEGRLTFTENHLDDIFDSADRPLEGKRWW 691

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        C+NL EALRS SPET IS+IP+HQDGSCNGLQHYAALGRDKLGA+AVN
Sbjct: 692  LNAEDPFQCLAVCMNLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 751

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IAARVL++++ DA+ DP  FPDA +AR LINQVDRKLVKQTVMTSVY
Sbjct: 752  LVAGEKPADVYSGIAARVLEIMREDAQKDPTIFPDALHARTLINQVDRKLVKQTVMTSVY 811

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ERS V ADD E+FGA+CYAAKITL ALG+MFE AR IM+WLG+C
Sbjct: 812  GVTYIGARDQIKRRLKERS-VIADDVELFGASCYAAKITLTALGQMFEAARGIMSWLGEC 870

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR  GRHLV TSLQVLTLQRETEKVMV+RQRTAFPP
Sbjct: 871  AKIIASENQPVRWTTPLGLPVVQPYRKLGRHLVKTSLQVLTLQRETEKVMVKRQRTAFPP 930

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTA +CK+AGLNFAGVHDSYWTHAC+VDE++RILREKFVELY+TPILE
Sbjct: 931  NFVHSLDGSHMMMTANSCKKAGLNFAGVHDSYWTHACDVDELSRILREKFVELYETPILE 990

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESF++SFPTLSFPP+PERGDFDL DVLES YFFN
Sbjct: 991  NLLESFERSFPTLSFPPLPERGDFDLRDVLESPYFFN 1027


>ref|XP_007214918.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Prunus
            persica]
 gb|ONI18904.1| hypothetical protein PRUPE_3G247300 [Prunus persica]
          Length = 1024

 Score = 1221 bits (3159), Expect = 0.0
 Identities = 601/817 (73%), Positives = 680/817 (83%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AI+ +Q++C+ GK++ AYAP+ D LPAD M+VI
Sbjct: 214  DMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADMMSVI 273

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTG E+G  R V+A   +GEAIEQE+RIH FLE               +  
Sbjct: 274  TMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGES-- 331

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              D   KE+E L+KKVTNLMKKQKL AV  IV  HD SK W    +A+VGSRLIELL Q+
Sbjct: 332  --DAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLTQT 389

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            A+IQPPADQ     PPDIRPAFVHTFRT  K+     RRYGVIECDP V KGLE+ ++H+
Sbjct: 390  AFIQPPADQLADG-PPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHM 448

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PP+NWTGYDKG Y FLPSYVMRIHGA+QQR+ +KRTP+E L+PVF ALD L
Sbjct: 449  VIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDAL 508

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNT+WRVNKRVL+VVDRIW+SGG +A LVDR+D+PLPE+PDTEDE  L           K
Sbjct: 509  GNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKK 568

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            EN E HSQRCD ELKL VARK+KDE GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILE
Sbjct: 569  ENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILE 628

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            F EGRPLG SGL WLKIH+ANL+AGGVDKLSLEGRIAFTE+HL+DIFDS D+        
Sbjct: 629  FQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWW 688

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINLAEALRS SPET IS+IPVHQDGSCNGLQHYAALGRDKLGA++VN
Sbjct: 689  LKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVN 748

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IA RVL++++RDA+ DPV FP+A  A+LLINQVDRKLVKQTVMTSVY
Sbjct: 749  LVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVY 808

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER ++ +DDAEIFG ACYAAKITL ALGEMFE AR IM+WLG+C
Sbjct: 809  GVTYIGARDQIKRRLKERGSI-SDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGEC 867

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR +GRHL+ TSLQVLTLQRETEKVMV+RQRTAFPP
Sbjct: 868  AKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPP 927

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLD SHMMMTA+ACK+AGL+FAGVHDSYWTHAC+VDEMN+ILREKFV+LY+TPILE
Sbjct: 928  NFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREKFVQLYETPILE 987

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQQSFP L+FPP+PERGDFDL DVLES YFFN
Sbjct: 988  NLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_021690796.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
            [Hevea brasiliensis]
          Length = 1022

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 603/818 (73%), Positives = 693/818 (84%), Gaps = 20/818 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AI  +QE+ + GK+R AYAP+FD LPAD MAVI
Sbjct: 211  DMCEQKLAPNLPYMKSLFLGWFEPLRDAILKEQELIREGKNRTAYAPYFDQLPADMMAVI 270

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK++GL+MTG  +GCA  V+A   +G+AI+QE+RIH FLE                E+
Sbjct: 271  TMHKLVGLVMTGGGHGCAMVVAAACKIGDAIDQEVRIHRFLEKTKKKRAGSEKNQ---ED 327

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              + + KEQ+ L KKVT+L+KKQKL AV +IVKGHDDSKPW Q  KA+VGSRLIELL+Q+
Sbjct: 328  ESNGMVKEQQKLRKKVTDLIKKQKLPAVRKIVKGHDDSKPWSQDAKAKVGSRLIELLIQT 387

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHK-NGRRYGVIECDPSVRKGLERASKH 1859
            AYIQPPA+QS    PP+IRPAFVHTFRT +K G+K +GRRYG+I+CDP V KGLE  ++H
Sbjct: 388  AYIQPPANQSADD-PPEIRPAFVHTFRT-LKHGNKESGRRYGIIQCDPLVLKGLEITARH 445

Query: 1858 VVMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDT 1679
            +V+PYMPML+PP+ WTGYDKGA+LFLPSYVMR HG +QQR+ +KRT +E LQPVF+ALDT
Sbjct: 446  MVIPYMPMLVPPIKWTGYDKGAHLFLPSYVMRTHGVRQQREAVKRTSREQLQPVFEALDT 505

Query: 1678 LGNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXX 1499
            LG+TKWR+NKRVL++VDRIW+SGG +A LVD++D+PLPEKPDTEDE  L           
Sbjct: 506  LGHTKWRINKRVLSIVDRIWNSGGRLADLVDQNDVPLPEKPDTEDEALLKKWKWKIRSVK 565

Query: 1498 KENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 1319
            KEN+E HSQRCD ELKL VARK++DE GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGIL
Sbjct: 566  KENKERHSQRCDTELKLAVARKIRDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 625

Query: 1318 EFAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR------- 1160
            EFAEGRPLG SGLRWLKIH+ANLFAGGVDKLS +GR+AFTE+HL+DIFDSA+R       
Sbjct: 626  EFAEGRPLGKSGLRWLKIHLANLFAGGVDKLSYDGRMAFTENHLDDIFDSAERPLEGKRW 685

Query: 1159 ------------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAV 1016
                         CI+L EALRS SPET IS+IP+HQDGSCNGLQHYAALGRDKLGA+AV
Sbjct: 686  WLHAEDPFQCLAVCIDLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKLGAAAV 745

Query: 1015 NLVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSV 836
            NLV GE+PADVYS IAARVLD+++RDA+ DP  FPDA +AR LINQVDRKLVKQTVMTSV
Sbjct: 746  NLVAGEKPADVYSGIAARVLDIMRRDAQKDPAVFPDALHARTLINQVDRKLVKQTVMTSV 805

Query: 835  YGVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGD 656
            YGVTYIGARDQIKRRL+ER  + ADDAEIF ++CYAAK+TL ALGEMFE AR+IM+WLG+
Sbjct: 806  YGVTYIGARDQIKRRLKERGFI-ADDAEIFRSSCYAAKVTLTALGEMFEAARSIMSWLGE 864

Query: 655  CAKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFP 476
            CAKIIASEN+PVRWTTPLGLPVVQPYR  GRHL+ TSLQVLTLQ+ETEKVMV+RQRTAFP
Sbjct: 865  CAKIIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQQETEKVMVKRQRTAFP 924

Query: 475  PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPIL 296
            PNFVHSLDGSHMMMTAVACK+AGLNFAGVHDSYWTHAC+VDEMNRILREKFVELY+ PIL
Sbjct: 925  PNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEKPIL 984

Query: 295  ENLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            ENL+ESFQQSFPTLSFP +PERGDFDL DVLES YFFN
Sbjct: 985  ENLMESFQQSFPTLSFPSLPERGDFDLQDVLESPYFFN 1022


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Prunus mume]
          Length = 1024

 Score = 1219 bits (3155), Expect = 0.0
 Identities = 600/817 (73%), Positives = 680/817 (83%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AI+ +Q++C+ GK +AAYAP+ D LPAD M+VI
Sbjct: 214  DMCEQKLAPNLPYMKSLFLGWFEPLRNAIDNEQDLCRKGKKKAAYAPYIDQLPADMMSVI 273

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTG E+G  R V+A   +GEAIEQE+RIH FLE               +  
Sbjct: 274  TMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENGES-- 331

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              D   KE+E L+KKVTNLMKKQKL AV  IV  HD SK W    +A++GSRLIELL Q+
Sbjct: 332  --DAAMKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKIGSRLIELLTQT 389

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            A+IQPPADQ     PPDIRPAFVHTFRT  K+     RRYGVIECDP V KGLE+ ++HV
Sbjct: 390  AFIQPPADQLADG-PPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARHV 448

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            ++PYMPML+PP+NWTGYDKG Y FLPSYVMRIHGA+QQR+ +KRTP+E L+PVF ALD L
Sbjct: 449  MIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDAL 508

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNT+WRVNKRVL+VVDRIW+SGG +A LVDR+D+PLPE+PDTEDE  L           K
Sbjct: 509  GNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVKK 568

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            EN E HSQRCD+ELKL VARK+KDE GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGILE
Sbjct: 569  ENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILE 628

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSAD--------- 1163
            F EGRPLG SGL WLKIH+ANL+AGGVDKLSLEGRIAFTE+HL+DIFDS D         
Sbjct: 629  FQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDIPLEGRRWW 688

Query: 1162 ----------RXCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINLAEALRS SPET IS+IPVHQDGSCNGLQHYAALGRDKLGA++VN
Sbjct: 689  LKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVN 748

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IA RVL++++RDA+ DP  FP+A +A+LLINQVDRKLVKQTVMTSVY
Sbjct: 749  LVTGEKPADVYSGIAVRVLEIMRRDAQKDPTVFPEALHAKLLINQVDRKLVKQTVMTSVY 808

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER ++ +DDAEIFG ACYAAKITL ALGEMFE AR IM+WLG+C
Sbjct: 809  GVTYIGARDQIKRRLKERGSI-SDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGEC 867

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR +GRHL+ TSLQVLTLQRETEKVMV+RQRTAFPP
Sbjct: 868  AKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPP 927

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLD SHMMMTA+ACK+AGL+FAGVHDSYWTHAC+VDEMN+ILREKFVELY+TPILE
Sbjct: 928  NFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREKFVELYETPILE 987

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLL+SFQQSFP L+FPP+PERGDFDL DVLES YFFN
Sbjct: 988  NLLKSFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1219 bits (3154), Expect = 0.0
 Identities = 599/818 (73%), Positives = 683/818 (83%), Gaps = 19/818 (2%)
 Frame = -1

Query: 2578 NDMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAV 2399
            +DMCEQKLAPNLPY+KSLFLGWFEPL   I A+Q++CK GK+RAAYAP+FD LPAD MAV
Sbjct: 167  SDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAV 226

Query: 2398 ITMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTE 2219
            ITMHK+MGLLMTGE NG AR V A  ++GEAIE E+RI  F+E               + 
Sbjct: 227  ITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSN 286

Query: 2218 EVPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQ 2039
             V    TKEQE L KKV+ LMKKQKL  V +IVK  DDSKPW Q    +VGSRLIELL++
Sbjct: 287  PV----TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIE 342

Query: 2038 SAYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKH 1859
            +AYIQPPADQ G   PPDIRPAFVHT +T +KE  K  RRYGVIECDP VRKGLE+ ++H
Sbjct: 343  TAYIQPPADQLGDG-PPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARH 401

Query: 1858 VVMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDT 1679
            +V+PYMPML+PP+NWTGYDKGAYLFLPSYVMRIHGA+QQR+ +KR P++ L+P F+AL+T
Sbjct: 402  MVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNT 461

Query: 1678 LGNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXX 1499
            LGNTKWR+NKRVL V+DRIW+SGG +A LVDR+D+PLPE+PDTEDE ++           
Sbjct: 462  LGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVK 521

Query: 1498 KENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 1319
            KEN E HSQRCD+ELKL VARK+KDE GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGIL
Sbjct: 522  KENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 581

Query: 1318 EFAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR------- 1160
            EFAEGRPLG SGLRWLKIH+AN++AGGVDKLS EGR+AFTE+HL DIFDSADR       
Sbjct: 582  EFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRW 641

Query: 1159 ------------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAV 1016
                         CINL+EALRS SPET IS++PVHQDGSCNGLQHYAALGRDKLGA+AV
Sbjct: 642  WLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAV 701

Query: 1015 NLVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSV 836
            NLV GE+PADVYS IAARVLD+++RDA+ DP + P+A  ARLLI+QVDRKLVKQTVMTSV
Sbjct: 702  NLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSV 761

Query: 835  YGVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGD 656
            YGVTYIGARDQIKRRL+ER  + AD+ E+F A+CYAAK TL ALGEMFE AR+IM+WLGD
Sbjct: 762  YGVTYIGARDQIKRRLKERCAI-ADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGD 820

Query: 655  CAKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFP 476
            CAK+IASEN PVRW TPLGLPVVQPYR  GRHL+ TSLQVL+LQRET+KVMV+RQRTAFP
Sbjct: 821  CAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFP 880

Query: 475  PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPIL 296
            PNFVHSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHAC+VDEMNRILREKFVELY  PIL
Sbjct: 881  PNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPIL 940

Query: 295  ENLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            ENLLE FQ+SFPTL+FPP+PERGDFDL +VLES YFFN
Sbjct: 941  ENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_021905220.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Carica papaya]
          Length = 1035

 Score = 1218 bits (3152), Expect = 0.0
 Identities = 599/818 (73%), Positives = 681/818 (83%), Gaps = 20/818 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL  AI  +Q+MC+ GK++ A AP+F  LPAD MA+I
Sbjct: 220  DMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQKMCRIGKNKTAIAPYFVQLPADMMAII 279

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+M L+MTG E+GCAR V A   +G+AIEQE+RI+ FLE                EE
Sbjct: 280  TMHKLMALMMTGGEHGCARVVQAACLIGDAIEQEVRIYKFLEKTENKKKKKNDKKVGNEE 339

Query: 2215 VPDIVT-KEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQ 2039
                 T KEQE L  KVTNL+KKQKL AV +IV+G  DS+PW Q +KA+VGSR+IELLL+
Sbjct: 340  DESNCTMKEQEKLRNKVTNLIKKQKLPAVRQIVRGQVDSRPWSQDIKAKVGSRVIELLLE 399

Query: 2038 SAYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKH 1859
            +AYIQPPAD      PPDIRPAF+HTFRT +KE  K  RR+GVIECDP V KGL+R ++H
Sbjct: 400  TAYIQPPADHIADT-PPDIRPAFIHTFRTVMKENKKTSRRFGVIECDPLVVKGLDRTARH 458

Query: 1858 VVMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDT 1679
            +V+PYMPML+PPV WTGYDKGA+LFLPSYVMR HGAKQQR+ +KR P++ L+PVF+ALDT
Sbjct: 459  MVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGAKQQREAVKRAPRKQLEPVFEALDT 518

Query: 1678 LGNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXX 1499
            LG+TKWRVNKRVL +VDRIW+SGG +A LVDR+D+PLPEKPDTEDE  +           
Sbjct: 519  LGSTKWRVNKRVLNIVDRIWTSGGVLADLVDRNDVPLPEKPDTEDETLIRKWKWKVRAVK 578

Query: 1498 KENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 1319
            KENRE HSQRCD ELKL VAR++KDE GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRG+L
Sbjct: 579  KENRERHSQRCDTELKLAVARRMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVL 638

Query: 1318 EFAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR------- 1160
            EFAEGRPLG SGLRWLKIH+ANL+AGGVDKLS EGR+ FTE+HL+D+FDSADR       
Sbjct: 639  EFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRVTFTENHLDDVFDSADRPLEGRRW 698

Query: 1159 ------------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAV 1016
                         CINL EALRS SPET ISYIPVHQDGSCNGLQHYAALGRDKLGA+AV
Sbjct: 699  WLKAEDPFQCLSVCINLTEALRSSSPETYISYIPVHQDGSCNGLQHYAALGRDKLGAAAV 758

Query: 1015 NLVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSV 836
            NLV GE+PADVYS IAARVLD+++RDA+ DP +FPDA  AR LINQVDRKLVKQTVMTSV
Sbjct: 759  NLVAGEKPADVYSGIAARVLDIMRRDAQKDPATFPDALRARALINQVDRKLVKQTVMTSV 818

Query: 835  YGVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGD 656
            YGVTYIGARDQIKRRL+ER     DDA+IFGA+CYAAK TL ALGEMF+ AR+IM WLG+
Sbjct: 819  YGVTYIGARDQIKRRLKER-GALTDDADIFGASCYAAKTTLTALGEMFQAARSIMTWLGE 877

Query: 655  CAKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFP 476
            CA+I+ASENQPV+WTTPLGLPVVQPYR  GRHL+ TSLQVLTLQRETEK+MV+RQRTAFP
Sbjct: 878  CARIVASENQPVQWTTPLGLPVVQPYRKIGRHLIKTSLQVLTLQRETEKIMVKRQRTAFP 937

Query: 475  PNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPIL 296
            PNFVHSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHAC+VDEMNRILREKFVELY+ PIL
Sbjct: 938  PNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEKPIL 997

Query: 295  ENLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            ENLLESFQQSFPTLSFP +PERGDFDL +VLES YFFN
Sbjct: 998  ENLLESFQQSFPTLSFPTLPERGDFDLREVLESPYFFN 1035


>ref|XP_012088094.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Jatropha
            curcas]
          Length = 1007

 Score = 1218 bits (3151), Expect = 0.0
 Identities = 597/817 (73%), Positives = 687/817 (84%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMC+QKLAPNLPYMK+LFLGWFEPL  AI  +QE+ + GK RAAYAP+FD LPAD MAVI
Sbjct: 195  DMCKQKLAPNLPYMKTLFLGWFEPLKDAISKEQELIREGKCRAAYAPYFDQLPADMMAVI 254

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+M L+MTG E+GCAR V+A   VG+AI+QE+RIH FLE                EE
Sbjct: 255  TMHKLMALVMTGGEHGCARVVAAALTVGDAIDQEVRIHKFLEKTKKKKTRNSEKNQ--EE 312

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              + + KEQE L KKVT+L++KQKL AV +IVKG DDSKPW Q  KA+VGSR+IELL+++
Sbjct: 313  ESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQDDSKPWSQDAKAKVGSRVIELLIRT 372

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPPADQ     PPDIRPAFVHTFRT  +   K  RRYGVI+CDP V KGLER+++H+
Sbjct: 373  AYIQPPADQRADG-PPDIRPAFVHTFRTVTQGERKGSRRYGVIQCDPLVLKGLERSARHM 431

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PPV WTGYDKGA+LFLPSYVMR HG +QQR+ +++T KE LQPVF+ALDTL
Sbjct: 432  VIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVRQQREAVRQTSKEQLQPVFEALDTL 491

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            G TKWR+NKR+LAV+DRIW+SGG +A LVDR+D+PLPE+PDTE+E  L           K
Sbjct: 492  GRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPLPEEPDTENEALLKKWKWRVKAVKK 551

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            EN+E HSQRCD ELKL VARK+KDE GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 552  ENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 611

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLG+SGLRWLKIH+ANLFAGGVDK S +GRIAFTE+HL+DIFDSADR        
Sbjct: 612  FAEGRPLGNSGLRWLKIHLANLFAGGVDKFSYDGRIAFTENHLDDIFDSADRPLEGKRWW 671

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        C++L EALRS SPET IS+IP+HQDGSCNGLQHYAALGRDK GA+AVN
Sbjct: 672  LHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKSGAAAVN 731

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IA+RVL++++RDAE DPV FPDA  A+ LINQVDRKLVKQTVMTSVY
Sbjct: 732  LVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPDALRAKTLINQVDRKLVKQTVMTSVY 791

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER  + AD++EIFGA+CYAAK+TL ALGEMFE AR+IM+WLG+C
Sbjct: 792  GVTYIGARDQIKRRLKERGFI-ADESEIFGASCYAAKVTLTALGEMFEAARSIMSWLGEC 850

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AK+IASEN+PVRWTTPLGLPVVQPYR  GRHL+ TSLQVLTLQ+ETEK+M++RQRTAFPP
Sbjct: 851  AKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQQETEKIMIKRQRTAFPP 910

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTAVACKRAGL FAGVHDSYWTHAC+VDEMNRILR+KFVELY+ PILE
Sbjct: 911  NFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYEIPILE 970

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQ+SFPTL FPP+PERGDFDL DVLES YFFN
Sbjct: 971  NLLESFQESFPTLPFPPLPERGDFDLRDVLESPYFFN 1007


>gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]
          Length = 908

 Score = 1218 bits (3151), Expect = 0.0
 Identities = 597/817 (73%), Positives = 687/817 (84%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMC+QKLAPNLPYMK+LFLGWFEPL  AI  +QE+ + GK RAAYAP+FD LPAD MAVI
Sbjct: 96   DMCKQKLAPNLPYMKTLFLGWFEPLKDAISKEQELIREGKCRAAYAPYFDQLPADMMAVI 155

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+M L+MTG E+GCAR V+A   VG+AI+QE+RIH FLE                EE
Sbjct: 156  TMHKLMALVMTGGEHGCARVVAAALTVGDAIDQEVRIHKFLEKTKKKKTRNSEKNQ--EE 213

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              + + KEQE L KKVT+L++KQKL AV +IVKG DDSKPW Q  KA+VGSR+IELL+++
Sbjct: 214  ESNDMVKEQEKLRKKVTDLIRKQKLPAVRQIVKGQDDSKPWSQDAKAKVGSRVIELLIRT 273

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPPADQ     PPDIRPAFVHTFRT  +   K  RRYGVI+CDP V KGLER+++H+
Sbjct: 274  AYIQPPADQRADG-PPDIRPAFVHTFRTVTQGERKGSRRYGVIQCDPLVLKGLERSARHM 332

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PPV WTGYDKGA+LFLPSYVMR HG +QQR+ +++T KE LQPVF+ALDTL
Sbjct: 333  VIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVRQQREAVRQTSKEQLQPVFEALDTL 392

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            G TKWR+NKR+LAV+DRIW+SGG +A LVDR+D+PLPE+PDTE+E  L           K
Sbjct: 393  GRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPLPEEPDTENEALLKKWKWRVKAVKK 452

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            EN+E HSQRCD ELKL VARK+KDE GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 453  ENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 512

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLG+SGLRWLKIH+ANLFAGGVDK S +GRIAFTE+HL+DIFDSADR        
Sbjct: 513  FAEGRPLGNSGLRWLKIHLANLFAGGVDKFSYDGRIAFTENHLDDIFDSADRPLEGKRWW 572

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        C++L EALRS SPET IS+IP+HQDGSCNGLQHYAALGRDK GA+AVN
Sbjct: 573  LHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIHQDGSCNGLQHYAALGRDKSGAAAVN 632

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IA+RVL++++RDAE DPV FPDA  A+ LINQVDRKLVKQTVMTSVY
Sbjct: 633  LVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPDALRAKTLINQVDRKLVKQTVMTSVY 692

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER  + AD++EIFGA+CYAAK+TL ALGEMFE AR+IM+WLG+C
Sbjct: 693  GVTYIGARDQIKRRLKERGFI-ADESEIFGASCYAAKVTLTALGEMFEAARSIMSWLGEC 751

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AK+IASEN+PVRWTTPLGLPVVQPYR  GRHL+ TSLQVLTLQ+ETEK+M++RQRTAFPP
Sbjct: 752  AKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQQETEKIMIKRQRTAFPP 811

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTAVACKRAGL FAGVHDSYWTHAC+VDEMNRILR+KFVELY+ PILE
Sbjct: 812  NFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYEIPILE 871

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQ+SFPTL FPP+PERGDFDL DVLES YFFN
Sbjct: 872  NLLESFQESFPTLPFPPLPERGDFDLRDVLESPYFFN 908


>ref|XP_017975629.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X2 [Theobroma cacao]
          Length = 1032

 Score = 1217 bits (3148), Expect = 0.0
 Identities = 605/817 (74%), Positives = 678/817 (82%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCE KLAPNLPY+KSLFLGWFEPL  AI  +QE+ + GK RA YA + D LPAD  AVI
Sbjct: 220  DMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTAVI 279

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTG E+GCAR V A   +G+AIEQE+RIH FLE                + 
Sbjct: 280  TMHKLMGLLMTGGEHGCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNEDEGDK- 338

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
             P+   KEQE L KKVT+L+KKQKL AV +IVKG DD+KPW Q  KA+VGS LIELL+Q+
Sbjct: 339  -PNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLMQT 397

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPPADQ     PPD+RPAFVH+ RT VKE  K GRRYGVIEC+P VRKGLER ++H+
Sbjct: 398  AYIQPPADQLADC-PPDVRPAFVHSLRTVVKENKKTGRRYGVIECNPLVRKGLERTARHM 456

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PPV WTGYD+GAYLF+PSY+MR HG KQQR+ +KRTP++ L+PVF+ALDTL
Sbjct: 457  VIPYMPMLVPPVKWTGYDRGAYLFIPSYIMRTHGVKQQREAVKRTPRKQLEPVFEALDTL 516

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            G TKWRVNKRVL VVDRIW+SGG +A LVDR D+PLPEKPD+EDE  L           K
Sbjct: 517  GCTKWRVNKRVLNVVDRIWTSGGRLADLVDRKDVPLPEKPDSEDEAVLRKWKWKVRSVKK 576

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            ENRE HS RCDVELKL VARK+KDE GF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 577  ENRERHSLRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 636

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            F EGRPLG SGLRWLKIH+ANL+AGGVDKLS EGR+AFTE+HL+DIFDSADR        
Sbjct: 637  FGEGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADRPLEGKRWW 696

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINLAEALRS SPET +S+IPVHQDGSCNGLQHYAALGRDKLGA++VN
Sbjct: 697  LKAEDPFQCLAVCINLAEALRSSSPETFVSHIPVHQDGSCNGLQHYAALGRDKLGAASVN 756

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IAARVLD+++RDA+ DP  FPDA +A++L+NQVDRKLVKQTVMTSVY
Sbjct: 757  LVAGEKPADVYSGIAARVLDIIRRDAQKDPAVFPDALHAKVLVNQVDRKLVKQTVMTSVY 816

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER  V  DD EIFGA+CYAAK TL ALGEMF+ AR IMNWLG+C
Sbjct: 817  GVTYIGARDQIKRRLKER-GVITDDKEIFGASCYAAKTTLTALGEMFQAARAIMNWLGEC 875

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR+ GRHL+ TSLQVLTLQRETEKVMV+RQRTAFPP
Sbjct: 876  AKIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPP 935

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTAVACK+AGL FAGVHDSYWTHA +VD+MNRILRE FVELY+ PILE
Sbjct: 936  NFVHSLDGSHMMMTAVACKKAGLTFAGVHDSYWTHASDVDKMNRILRENFVELYEVPILE 995

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQQSFPTL FPP+PERGDFDL DVLES YFFN
Sbjct: 996  NLLESFQQSFPTLCFPPLPERGDFDLRDVLESPYFFN 1032


>emb|CBI27412.3| unnamed protein product, partial [Vitis vinifera]
          Length = 810

 Score = 1216 bits (3147), Expect = 0.0
 Identities = 598/816 (73%), Positives = 681/816 (83%), Gaps = 19/816 (2%)
 Frame = -1

Query: 2572 MCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVIT 2393
            MCEQKLAPNLPY+KSLFLGWFEPL   I A+Q++CK GK+RAAYAP+FD LPAD MAVIT
Sbjct: 1    MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60

Query: 2392 MHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEEV 2213
            MHK+MGLLMTGE NG AR V A  ++GEAIE E+RI  F+E               +  V
Sbjct: 61   MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPV 120

Query: 2212 PDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQSA 2033
                TKEQE L KKV+ LMKKQKL  V +IVK  DDSKPW Q    +VGSRLIELL+++A
Sbjct: 121  ----TKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETA 176

Query: 2032 YIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHVV 1853
            YIQPPADQ G   PPDIRPAFVHT +T +KE  K  RRYGVIECDP VRKGLE+ ++H+V
Sbjct: 177  YIQPPADQLGDG-PPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMV 235

Query: 1852 MPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTLG 1673
            +PYMPML+PP+NWTGYDKGAYLFLPSYVMRIHGA+QQR+ +KR P++ L+P F+AL+TLG
Sbjct: 236  IPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLG 295

Query: 1672 NTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXKE 1493
            NTKWR+NKRVL V+DRIW+SGG +A LVDR+D+PLPE+PDTEDE ++           KE
Sbjct: 296  NTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKE 355

Query: 1492 NRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEF 1313
            N E HSQRCD+ELKL VARK+KDE GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF
Sbjct: 356  NSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 415

Query: 1312 AEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR--------- 1160
            AEGRPLG SGLRWLKIH+AN++AGGVDKLS EGR+AFTE+HL DIFDSADR         
Sbjct: 416  AEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWL 475

Query: 1159 ----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVNL 1010
                       CINL+EALRS SPET IS++PVHQDGSCNGLQHYAALGRDKLGA+AVNL
Sbjct: 476  SAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNL 535

Query: 1009 VEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVYG 830
            V GE+PADVYS IAARVLD+++RDA+ DP + P+A  ARLLI+QVDRKLVKQTVMTSVYG
Sbjct: 536  VAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYG 595

Query: 829  VTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDCA 650
            VTYIGARDQIKRRL+ER  + AD+ E+F A+CYAAK TL ALGEMFE AR+IM+WLGDCA
Sbjct: 596  VTYIGARDQIKRRLKERCAI-ADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCA 654

Query: 649  KIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPPN 470
            K+IASEN PVRW TPLGLPVVQPYR  GRHL+ TSLQVL+LQRET+KVMV+RQRTAFPPN
Sbjct: 655  KVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPN 714

Query: 469  FVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILEN 290
            FVHSLDGSHMMMTAVAC++AGLNFAGVHDSYWTHAC+VDEMNRILREKFVELY  PILEN
Sbjct: 715  FVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILEN 774

Query: 289  LLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            LLE FQ+SFPTL+FPP+PERGDFDL +VLES YFFN
Sbjct: 775  LLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 810


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1216 bits (3146), Expect = 0.0
 Identities = 597/817 (73%), Positives = 684/817 (83%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPYMKSLFLGWFEPL   I A+QE+C+ GK+RAAYAP+FD LPA+ M+VI
Sbjct: 179  DMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKNRAAYAPYFDQLPAEMMSVI 238

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK++GLLMTG E+G AR V A   +G+AIE E+RI+ FLE                  
Sbjct: 239  TMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKFLEKTKKKTDKDKKAEGGES- 297

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              D   KEQ+ L KKVT+LMKKQKL  V +IVK  DDSKPW Q  +A+VGS LIELL+Q+
Sbjct: 298  --DPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPWGQDAQAKVGSHLIELLMQT 355

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQ PADQ     PPDIRPAF HT +T  KE  K  RRYG+IECDP VRKGLER ++H+
Sbjct: 356  AYIQSPADQLADG-PPDIRPAFRHTLKTITKESQKTSRRYGLIECDPLVRKGLERTARHM 414

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PP+NWTGYDKGAYLFLPSYVMR HGA+QQR+ +KRT ++ L+P+F+ALDTL
Sbjct: 415  VIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRTSRKQLEPIFEALDTL 474

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            GNTKWR+NKRVL VVDRIW+SGG +A LVDR+D+PLPE+P+TEDE +L           K
Sbjct: 475  GNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPETEDEAELKKWKWKVKAVKK 534

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            EN E HSQRCD ELKL VAR++KDE GFFYPHNLDFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 535  ENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILE 594

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLG SGLRWLKIH+ANL+AGGVDKLS EGRIAFTE+HL+DIFDSADR        
Sbjct: 595  FAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWW 654

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINL+EALRS SPET+IS+IP+HQDGSCNGLQHYAALGRDKLGA+AVN
Sbjct: 655  LNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNGLQHYAALGRDKLGAAAVN 714

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV G++PADVYS +AARVLD+++RDA+ DP + P+A +ARLLINQVDRKLVKQTVMTSVY
Sbjct: 715  LVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLLINQVDRKLVKQTVMTSVY 774

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER N  AD++E+FGA+CYAAK T+ ALGEMF+ AR+IM+WLGDC
Sbjct: 775  GVTYIGARDQIKRRLKER-NAIADESELFGASCYAAKTTITALGEMFKAARSIMSWLGDC 833

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPVRWTTPLGLPVVQPYR  GRHL+ TSLQVLTLQRET+KVMV+RQRTAFPP
Sbjct: 834  AKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 893

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NF+HSLDGSHMMMTAVACKRAGLNFAGVHDS+WTHAC+VDEMN+ILREKFVELY+TPI+E
Sbjct: 894  NFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVDEMNKILREKFVELYETPIME 953

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQQSFP LSFPP+PE GDFDL +VL S YFFN
Sbjct: 954  NLLESFQQSFPALSFPPLPECGDFDLHEVLVSPYFFN 990


>ref|XP_022728124.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
            isoform X1 [Durio zibethinus]
          Length = 1032

 Score = 1214 bits (3142), Expect = 0.0
 Identities = 605/817 (74%), Positives = 677/817 (82%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCE KLAPNLPYMKSLFLGWFEP   AI  +QE+ ++GK RA YA + D LPAD  AVI
Sbjct: 220  DMCEHKLAPNLPYMKSLFLGWFEPFRDAIIKEQELYRSGKLRAGYAAYLDQLPADMTAVI 279

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK++GLLMTG E+GCAR V A   +G+AIEQE+RIH FLE                E 
Sbjct: 280  TMHKLVGLLMTGGEHGCARVVQAACLIGDAIEQEVRIHKFLEKTKKKKVDKKNEDEDDES 339

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
              D   K QE L KKVTNL+KKQKL AV +IV+G DD+KPW Q  KA+VGS LIELL QS
Sbjct: 340  --DAAIKVQERLRKKVTNLIKKQKLPAVRQIVEGQDDTKPWNQDAKAKVGSHLIELLTQS 397

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPPADQ     PPDIRPAF H+F+T VKE  K GRRYGVIECDP VRKGLER +KH+
Sbjct: 398  AYIQPPADQLADC-PPDIRPAFRHSFKTVVKENKKTGRRYGVIECDPLVRKGLERTAKHM 456

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            VMPYMPML+PPV WTGYD+GAYLFLPSY+MR HGAKQQR+ ++RTP + L+ VF+ALDTL
Sbjct: 457  VMPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVRRTPGKQLEKVFEALDTL 516

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            G TKWRVNKR+L+VVDRIW+SGG +A LVDR+D+PLPEKPD+EDE  L           K
Sbjct: 517  GYTKWRVNKRILSVVDRIWTSGGRLADLVDRNDVPLPEKPDSEDEALLRKWKWKVKSVKK 576

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            ENRE HSQRCDVELKL VARK+KDE GF+YPHN+DFRGRAYPMHP+LNHLGSDLCRGILE
Sbjct: 577  ENRERHSQRCDVELKLAVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGILE 636

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEG PLG SGL WLKIH+ANL+AGGVDKLS EGR+AFTE+HL+DIFDSAD+        
Sbjct: 637  FAEGHPLGRSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGRRWW 696

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINL EALRS SPET +S+IPVHQDGSCNGLQHYAALGRDKLGA+AVN
Sbjct: 697  LKAEDPFQCLAVCINLTEALRSSSPETFLSHIPVHQDGSCNGLQHYAALGRDKLGAAAVN 756

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IAARVLD+++RDA+ DP  F DA +A+ L+NQVDRKLVKQTVMTSVY
Sbjct: 757  LVAGEKPADVYSGIAARVLDIMRRDAQKDPAVFRDALHAKALVNQVDRKLVKQTVMTSVY 816

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER +V  DD E+FGA+CYAAK TL ALGEMF+ AR IMNWLG+C
Sbjct: 817  GVTYIGARDQIKRRLKER-DVITDDKELFGASCYAAKTTLIALGEMFQAARAIMNWLGEC 875

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASENQPV WTTPLGLPVVQPYR++GRHLV TSLQVLTLQRETEK+MV+RQRTAFPP
Sbjct: 876  AKIIASENQPVSWTTPLGLPVVQPYRVFGRHLVKTSLQVLTLQRETEKIMVKRQRTAFPP 935

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NFVHSLDGSHMMMTAVACK+AGL FAGVHDSYWTHA +VD+MNRILREKFVELY+TPILE
Sbjct: 936  NFVHSLDGSHMMMTAVACKKAGLTFAGVHDSYWTHASDVDKMNRILREKFVELYETPILE 995

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
            NLLESFQQSFPTLSFPP+PERGDFDL DVLES YFFN
Sbjct: 996  NLLESFQQSFPTLSFPPLPERGDFDLRDVLESPYFFN 1032


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 1214 bits (3141), Expect = 0.0
 Identities = 599/817 (73%), Positives = 678/817 (82%), Gaps = 19/817 (2%)
 Frame = -1

Query: 2575 DMCEQKLAPNLPYMKSLFLGWFEPLSKAIEADQEMCKNGKHRAAYAPFFDLLPADKMAVI 2396
            DMCEQKLAPNLPY+KSLFLGWFEPL   I  +QE+C  GK +AAYA +   LPAD MAVI
Sbjct: 211  DMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVI 270

Query: 2395 TMHKIMGLLMTGEENGCARFVSAYGNVGEAIEQEIRIHNFLEXXXXXXXXXXXXXXXTEE 2216
            TMHK+MGLLMTG ++G AR V A   +G+AIEQE+RIHNFLE                E 
Sbjct: 271  TMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEH 330

Query: 2215 VPDIVTKEQEGLHKKVTNLMKKQKLHAVGRIVKGHDDSKPWPQHVKAQVGSRLIELLLQS 2036
            V    T+EQE L KKVTNLMKKQKL AVG+IV+  DDSKPW Q  KA+VGSRLIELLLQ+
Sbjct: 331  V----TQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQT 386

Query: 2035 AYIQPPADQSGGAMPPDIRPAFVHTFRTSVKEGHKNGRRYGVIECDPSVRKGLERASKHV 1856
            AYIQPPA+Q     PPDIRPAF+H+ RT  KE     RRYG+I+CD  V KGLER ++H+
Sbjct: 387  AYIQPPANQLA-VDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTARHM 445

Query: 1855 VMPYMPMLIPPVNWTGYDKGAYLFLPSYVMRIHGAKQQRDVLKRTPKENLQPVFDALDTL 1676
            V+PYMPML+PPV WTGYDKG +L+LPSYVMR HGA+QQR+ +KR  +  LQPVF+ALDTL
Sbjct: 446  VIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTL 505

Query: 1675 GNTKWRVNKRVLAVVDRIWSSGGSIAGLVDRDDIPLPEKPDTEDEEQLTXXXXXXXXXXK 1496
            G+TKWR+NKRVL+VVDRIW+ GG +A LVDRDD PLPE+PDTEDE   T          K
Sbjct: 506  GSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKK 565

Query: 1495 ENRESHSQRCDVELKLTVARKLKDEAGFFYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 1316
            ENRE HSQRCD+ELKL VARK+KDE GFFYPHN+DFRGRAYPMHPHLNHLGSD+CRG+LE
Sbjct: 566  ENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLE 625

Query: 1315 FAEGRPLGSSGLRWLKIHVANLFAGGVDKLSLEGRIAFTESHLNDIFDSADR-------- 1160
            FAEGRPLG SGLRWLKIH+ANLFAGGV+KLSLEGRIAFTE+H++DIFDSAD+        
Sbjct: 626  FAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGRRWW 685

Query: 1159 -----------XCINLAEALRSPSPETIISYIPVHQDGSCNGLQHYAALGRDKLGASAVN 1013
                        CINL+EA+RS SPET IS+IPVHQDGSCNGLQHYAALGRD+LGA+AVN
Sbjct: 686  LNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAAAVN 745

Query: 1012 LVEGERPADVYSEIAARVLDVVKRDAELDPVSFPDAKNARLLINQVDRKLVKQTVMTSVY 833
            LV GE+PADVYS IAARVLD++KRDA+ DP  FPDA  AR L+NQVDRKLVKQTVMTSVY
Sbjct: 746  LVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVY 805

Query: 832  GVTYIGARDQIKRRLQERSNVAADDAEIFGAACYAAKITLAALGEMFEGARNIMNWLGDC 653
            GVTYIGARDQIKRRL+ER  + ADD+E+FGAACYAAK+TL ALGEMFE AR+IM WLG+C
Sbjct: 806  GVTYIGARDQIKRRLKERGAI-ADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLGEC 864

Query: 652  AKIIASENQPVRWTTPLGLPVVQPYRMYGRHLVSTSLQVLTLQRETEKVMVRRQRTAFPP 473
            AKIIASEN+PVRWTTPLGLPVVQPYR  GRHL+ TSLQ+LTLQRETEKVMV+RQRTAFPP
Sbjct: 865  AKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPP 924

Query: 472  NFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACNVDEMNRILREKFVELYQTPILE 293
            NF+HSLDGSHMMMTAVAC+RAGLNFAGVHDSYWTHAC+VD++NRILREKFVELY+TPILE
Sbjct: 925  NFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILE 984

Query: 292  NLLESFQQSFPTLSFPPVPERGDFDLSDVLESSYFFN 182
             LLESFQ S+PTL FPP+PERGDFDL DVLES YFFN
Sbjct: 985  KLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021