BLASTX nr result

ID: Chrysanthemum21_contig00015279 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015279
         (1097 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY84000.1| hypothetical protein LSAT_8X28681 [Lactuca sativa]      57   9e-06

>gb|PLY84000.1| hypothetical protein LSAT_8X28681 [Lactuca sativa]
          Length = 191

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
 Frame = -2

Query: 892 NPQ-----SFAYFSFLFAMLAIITLLLGAVSTLVRQNQSLFKAH---GGVFIIMTIVSGS 737
           NPQ      ++   +L     ++T+ L  +S L  + Q+  K+     G F+ +++V+  
Sbjct: 34  NPQRAWIHDYSAILYLMYTATLVTIYLPIISLLQLKFQNQQKSPFETSGFFMNLSVVALC 93

Query: 736 MVVLASGILILASFMLQ-SWMKD---IHYTILKTIGSFSAILVPFSLGAVVFLPSGDLNW 569
           +    SG+L   +  LQ S M+D   +HY ILK + SF  IL P SL  V+ +P+  L+W
Sbjct: 94  IATATSGVLFYINHRLQNSTMEDFSLVHYMILKGVFSFFGILTPVSLVLVLIIPN-KLDW 152

Query: 568 IAFTVLCGIFVGLLYLYSF 512
           I + ++C + +G++ + +F
Sbjct: 153 IRYVIIC-VLLGVVAISNF 170


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