BLASTX nr result

ID: Chrysanthemum21_contig00015267 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015267
         (472 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06380.1| CheY-like superfamily, partial [Cynara cardunculu...    54   8e-06

>gb|KVI06380.1| CheY-like superfamily, partial [Cynara cardunculus var. scolymus]
          Length = 233

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 32/54 (59%), Positives = 35/54 (64%), Gaps = 12/54 (22%)
 Frame = -3

Query: 470 LKDSILKTVNMEIGQIQSHKRKRNDDIL------------PVSPQQPTQKLARL 345
           LKDSILK+   EI +IQSHKRKRN+D L            P SPQQPT KLARL
Sbjct: 180 LKDSILKSEGAEIRRIQSHKRKRNNDRLPSSVACHDLSVPPPSPQQPTPKLARL 233


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