BLASTX nr result

ID: Chrysanthemum21_contig00015211 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015211
         (452 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY68176.1| hypothetical protein LSAT_8X82901 [Lactuca sativa]      74   1e-14

>gb|PLY68176.1| hypothetical protein LSAT_8X82901 [Lactuca sativa]
          Length = 86

 Score = 74.3 bits (181), Expect = 1e-14
 Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
 Frame = -2

Query: 418 MAGLQQFYFFPTDFLDTINKDHPSSLPLDHANKDRNMEDDVKHIEKVVVLRGSAE---SK 248
           MAGLQQFYFFPTDFLDTI + HPS LPL  AN     +D  + +E V+  RGS E     
Sbjct: 1   MAGLQQFYFFPTDFLDTI-RHHPSLLPLT-ANDGDAGDDGKRQLETVMGFRGSFEKLKDN 58

Query: 247 IKNLK-ISSDSLPRRVVPVHKRKAK 176
            KN+K ISSD +PR VV + K+K K
Sbjct: 59  YKNVKIISSDPMPRSVVAILKQKPK 83


Top