BLASTX nr result

ID: Chrysanthemum21_contig00015178 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015178
         (534 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH93875.1| SKI-interacting protein, SKIP [Cynara cardunculus...    62   6e-08
ref|XP_023756747.1| SNW/SKI-interacting protein A-like [Lactuca ...    60   3e-07
ref|XP_023756749.1| SNW/SKI-interacting protein A-like [Lactuca ...    60   3e-07
gb|OTG17034.1| putative SKI-interacting protein, SKIP [Helianthu...    58   4e-07
ref|XP_021996576.1| SNW/SKI-interacting protein [Helianthus annuus]    58   2e-06
gb|OTG03781.1| putative chromatin protein family [Helianthus ann...    58   2e-06
gb|KVI11567.1| hypothetical protein Ccrd_010023 [Cynara carduncu...    57   2e-06

>gb|KVH93875.1| SKI-interacting protein, SKIP [Cynara cardunculus var. scolymus]
          Length = 606

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 32/50 (64%), Positives = 34/50 (68%)
 Frame = -1

Query: 534 LDQFLTEVKGGKKPLDNIXXXXXXXXXXXXXXREGYEGSGRSRIGFKRGR 385
           LDQFLTEVKGGKK LD +              REGYEGSGRSRIGF+RGR
Sbjct: 557 LDQFLTEVKGGKKALDKVGSGGTMKASGGSSTREGYEGSGRSRIGFERGR 606


>ref|XP_023756747.1| SNW/SKI-interacting protein A-like [Lactuca sativa]
 gb|PLY90699.1| hypothetical protein LSAT_8X96801 [Lactuca sativa]
          Length = 595

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/50 (60%), Positives = 34/50 (68%)
 Frame = -1

Query: 534 LDQFLTEVKGGKKPLDNIXXXXXXXXXXXXXXREGYEGSGRSRIGFKRGR 385
           LDQFLT+VKGGKK +D +              REGYEGSGRSRIGF+RGR
Sbjct: 546 LDQFLTQVKGGKKAMDKVGSSGTMKASGGASMREGYEGSGRSRIGFERGR 595


>ref|XP_023756749.1| SNW/SKI-interacting protein A-like [Lactuca sativa]
 gb|PLY90707.1| hypothetical protein LSAT_8X96740 [Lactuca sativa]
          Length = 605

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/50 (60%), Positives = 34/50 (68%)
 Frame = -1

Query: 534 LDQFLTEVKGGKKPLDNIXXXXXXXXXXXXXXREGYEGSGRSRIGFKRGR 385
           LDQFLT+VKGGKK +D +              REGYEGSGRSRIGF+RGR
Sbjct: 556 LDQFLTQVKGGKKAMDKVGSSGTMKASGGASMREGYEGSGRSRIGFERGR 605


>gb|OTG17034.1| putative SKI-interacting protein, SKIP [Helianthus annuus]
          Length = 185

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = -1

Query: 534 LDQFLTEVKGGKKPLDNIXXXXXXXXXXXXXXREGYEGSGRSRIGFKRGR 385
           LDQFLTEVKGGKKPLD I              R+GYEGSGR+RIGF++GR
Sbjct: 137 LDQFLTEVKGGKKPLDKI-GSGGTMRASGGGSRDGYEGSGRTRIGFEKGR 185


>ref|XP_021996576.1| SNW/SKI-interacting protein [Helianthus annuus]
          Length = 622

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = -1

Query: 534 LDQFLTEVKGGKKPLDNIXXXXXXXXXXXXXXREGYEGSGRSRIGFKRGR 385
           LDQFLTEVKGGKKPLD I              R+GYEGSGR+RIGF++GR
Sbjct: 574 LDQFLTEVKGGKKPLDKI-GSGGTMRASGGGSRDGYEGSGRTRIGFEKGR 622


>gb|OTG03781.1| putative chromatin protein family [Helianthus annuus]
          Length = 627

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = -1

Query: 534 LDQFLTEVKGGKKPLDNIXXXXXXXXXXXXXXREGYEGSGRSRIGFKRGR 385
           LDQFLTEVKGGKKPLD I              R+GYEGSGR+RIGF++GR
Sbjct: 579 LDQFLTEVKGGKKPLDKI-GSGGTMRASGGGSRDGYEGSGRTRIGFEKGR 627


>gb|KVI11567.1| hypothetical protein Ccrd_010023 [Cynara cardunculus var. scolymus]
          Length = 622

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/51 (62%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = -1

Query: 534 LDQFLTEVKGGKKPLDNIXXXXXXXXXXXXXXREGYE-GSGRSRIGFKRGR 385
           LDQFLTEVKGGKK LD +              REGYE GSGRSRIGF+RGR
Sbjct: 572 LDQFLTEVKGGKKALDKVGSGGTMKASGGSSMREGYEGGSGRSRIGFERGR 622


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