BLASTX nr result

ID: Chrysanthemum21_contig00015153 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015153
         (380 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH99286.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]    83   6e-16
ref|XP_021977983.1| uncharacterized protein LOC110873375 [Helian...    59   2e-11

>gb|KVH99286.1| Actin-binding FH2 [Cynara cardunculus var. scolymus]
          Length = 1570

 Score = 83.2 bits (204), Expect = 6e-16
 Identities = 50/96 (52%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
 Frame = -2

Query: 265 SEKHEPALVSNQVYMTAXXXXXXXXXX--------TDGNVYCSEPAGVIEQGANLSQDDK 110
           S K EP  +SN+V +T                   TDGN+ C   +GVIEQGANLSQDD 
Sbjct: 511 SAKSEPTFISNKVDITVEEHDEHACDLAHITPKDATDGNLSCPGSSGVIEQGANLSQDDM 570

Query: 109 QYEKSSEKVGVADSERSTTDSKIEKININLHQEMNQ 2
           Q+EKSS KVGV+DSE    DSK E+ NI L+QEMNQ
Sbjct: 571 QFEKSSMKVGVSDSE-WPLDSKAEQHNITLYQEMNQ 605


>ref|XP_021977983.1| uncharacterized protein LOC110873375 [Helianthus annuus]
 ref|XP_021977984.1| uncharacterized protein LOC110873375 [Helianthus annuus]
 ref|XP_021977985.1| uncharacterized protein LOC110873375 [Helianthus annuus]
 gb|OTG19109.1| putative SWAP/Surp, Zinc finger, CCCH-type [Helianthus annuus]
          Length = 987

 Score = 58.9 bits (141), Expect(2) = 2e-11
 Identities = 40/88 (45%), Positives = 51/88 (57%)
 Frame = -2

Query: 265 SEKHEPALVSNQVYMTAXXXXXXXXXXTDGNVYCSEPAGVIEQGANLSQDDKQYEKSSEK 86
           +EKHE A +SN V   A             N+ C  P   IE G +LS +D Q EK++ K
Sbjct: 280 NEKHEAAFISNDVDTKAE------------NIACESPRA-IEPGLDLSLNDTQLEKTT-K 325

Query: 85  VGVADSERSTTDSKIEKININLHQEMNQ 2
           V VADSE S+ D K E+ N+NL+QEMNQ
Sbjct: 326 VDVADSE-SSLDCKTEQNNVNLYQEMNQ 352



 Score = 37.4 bits (85), Expect(2) = 2e-11
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -1

Query: 347 HSPAGSDMDKEDDITQPE 294
           HSPAGSDMD EDDIT PE
Sbjct: 253 HSPAGSDMDMEDDITLPE 270


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