BLASTX nr result

ID: Chrysanthemum21_contig00015075 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015075
         (372 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH90952.1| F-box domain, cyclin-like protein, partial [Cynar...    79   5e-15
gb|OTG08400.1| putative F-box domain-containing protein [Heliant...    63   6e-09
ref|XP_021991708.1| F-box/kelch-repeat protein At3g06240-like [H...    63   6e-09
ref|XP_023748720.1| uncharacterized protein LOC111896976 [Lactuc...    54   2e-06
ref|XP_023748637.1| F-box/kelch-repeat protein At3g06240-like [L...    54   5e-06

>gb|KVH90952.1| F-box domain, cyclin-like protein, partial [Cynara cardunculus var.
           scolymus]
          Length = 288

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = -2

Query: 245 TLEGCLCVFRFELLPNDLWVMKEYNKKHSWELSGCENEMKHDAVHGLQYMLNYIPNK 75
           T+ GCLC F++E LPNDLW+MK YN K SW + G E  +K++AVHG++ + NYIPN+
Sbjct: 167 TINGCLCSFQYENLPNDLWMMKNYNVKQSWGIFGPERVIKYEAVHGIKRLKNYIPNQ 223


>gb|OTG08400.1| putative F-box domain-containing protein [Helianthus annuus]
          Length = 361

 Score = 62.8 bits (151), Expect = 6e-09
 Identities = 24/57 (42%), Positives = 42/57 (73%)
 Frame = -2

Query: 245 TLEGCLCVFRFELLPNDLWVMKEYNKKHSWELSGCENEMKHDAVHGLQYMLNYIPNK 75
           T+E  LC+F  ++  +++WV K+YNK+  WE+ G ++E+K+D VH ++ + +YIPNK
Sbjct: 242 TMEENLCLFGDDIYTHEVWVRKDYNKQQCWEIFGPDHEIKNDVVHSIKLLKHYIPNK 298


>ref|XP_021991708.1| F-box/kelch-repeat protein At3g06240-like [Helianthus annuus]
          Length = 377

 Score = 62.8 bits (151), Expect = 6e-09
 Identities = 24/57 (42%), Positives = 42/57 (73%)
 Frame = -2

Query: 245 TLEGCLCVFRFELLPNDLWVMKEYNKKHSWELSGCENEMKHDAVHGLQYMLNYIPNK 75
           T+E  LC+F  ++  +++WV K+YNK+  WE+ G ++E+K+D VH ++ + +YIPNK
Sbjct: 242 TMEENLCLFGDDIYTHEVWVRKDYNKQQCWEIFGPDHEIKNDVVHSIKLLKHYIPNK 298


>ref|XP_023748720.1| uncharacterized protein LOC111896976 [Lactuca sativa]
          Length = 166

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 23/57 (40%), Positives = 40/57 (70%)
 Frame = -2

Query: 245 TLEGCLCVFRFELLPNDLWVMKEYNKKHSWELSGCENEMKHDAVHGLQYMLNYIPNK 75
           ++ GCLCVF    +  ++W+M EYN + SWE+   ++++K + VH L+ +++YIPNK
Sbjct: 29  SINGCLCVFD---VLEEVWMMNEYNVRESWEIVEPKDKIKTEIVHCLKDLMHYIPNK 82


>ref|XP_023748637.1| F-box/kelch-repeat protein At3g06240-like [Lactuca sativa]
          Length = 367

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 23/57 (40%), Positives = 40/57 (70%)
 Frame = -2

Query: 245 TLEGCLCVFRFELLPNDLWVMKEYNKKHSWELSGCENEMKHDAVHGLQYMLNYIPNK 75
           ++ GCLCVF    +  ++W+M EYN + SWE+   ++++K + VH L+ +++YIPNK
Sbjct: 230 SINGCLCVFD---VLEEVWMMNEYNVRESWEIVEPKDKIKTEIVHCLKDLMHYIPNK 283


Top