BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00015059
         (417 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023742377.1| nuclear pore complex protein NUP98A [Lactuca...    60   1e-07
gb|EEC71412.1| hypothetical protein OsI_03588 [Oryza sativa Indi...    55   7e-06
gb|EEE55322.1| hypothetical protein OsJ_03322 [Oryza sativa Japo...    55   7e-06
ref|XP_015633699.1| PREDICTED: DNA-directed RNA polymerase II su...    55   7e-06

>ref|XP_023742377.1| nuclear pore complex protein NUP98A [Lactuca sativa]
 ref|XP_023742378.1| nuclear pore complex protein NUP98A [Lactuca sativa]
 gb|PLY67232.1| hypothetical protein LSAT_6X80720 [Lactuca sativa]
          Length = 1016

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 38/66 (57%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
 Frame = -2

Query: 413 GTSTTTLG---FGARTSPSPF-DTPNTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNS 246
           G ST TLG   FGA TS +PF  TP+ + SV GSTPGFG   S SPFG P+T +F TS S
Sbjct: 435 GNSTPTLGSSPFGA-TSSNPFGSTPSPTPSVFGSTPGFGSTTSASPFGAPSTSTFGTSTS 493

Query: 245 APGFGA 228
              FGA
Sbjct: 494 I--FGA 497


>gb|EEC71412.1| hypothetical protein OsI_03588 [Oryza sativa Indica Group]
          Length = 625

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 413 GTSTTTLGFGARTSPSPFDTP-NTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNSAPG 237
           GTS TT G G   +P+P DTP + S+  S STPG G + SP+P   P + S +TS + PG
Sbjct: 72  GTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPG 131

Query: 236 FGARMLPLP 210
            G    P P
Sbjct: 132 GGGGYSPTP 140


>gb|EEE55322.1| hypothetical protein OsJ_03322 [Oryza sativa Japonica Group]
          Length = 650

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 413 GTSTTTLGFGARTSPSPFDTP-NTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNSAPG 237
           GTS TT G G   +P+P DTP + S+  S STPG G + SP+P   P + S +TS + PG
Sbjct: 72  GTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPG 131

Query: 236 FGARMLPLP 210
            G    P P
Sbjct: 132 GGGGYSPTP 140



 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = -2

Query: 416 SGTSTTTLGFGARTSPSPFDTP-NTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNSAP 240
           S TS TT G G   SP+P DTP + S+  S +TPG G   +P+P   P + S +TS + P
Sbjct: 123 SDTSPTTPGGGGGYSPTPSDTPPSPSSDTSPTTPGGGGGYTPTPSDAPPSPSSDTSPTTP 182

Query: 239 GFGARMLPLPFXXXXXXXXXXXXXXXXXGARTSPLPFNTSSTPCFGA 99
           G G    P P                  G   +P P +T  +P  G+
Sbjct: 183 GGGGGYTPTPSDAPPSPSSDTSPTTPGGGGGYTPTPSDTPPSPSSGS 229



 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -2

Query: 416 SGTSTTTLGFGARTSPSPFDTP-NTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNSAP 240
           S TS +T G G  +SP+P D P + S+  S +TPG G   SP+P  TP + S +TS + P
Sbjct: 97  SDTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGGGYSPTPSDTPPSPSSDTSPTTP 156

Query: 239 GFGARMLPLP 210
           G G    P P
Sbjct: 157 GGGGGYTPTP 166


>ref|XP_015633699.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Oryza
           sativa Japonica Group]
 dbj|BAF06034.1| Os01g0726700 [Oryza sativa Japonica Group]
 dbj|BAS74130.1| Os01g0726700 [Oryza sativa Japonica Group]
          Length = 662

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 413 GTSTTTLGFGARTSPSPFDTP-NTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNSAPG 237
           GTS TT G G   +P+P DTP + S+  S STPG G + SP+P   P + S +TS + PG
Sbjct: 84  GTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPG 143

Query: 236 FGARMLPLP 210
            G    P P
Sbjct: 144 GGGGYSPTP 152



 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
 Frame = -2

Query: 416 SGTSTTTLGFGARTSPSPFDTP-NTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNSAP 240
           S TS TT G G   SP+P DTP + S+  S +TPG G   +P+P   P + S +TS + P
Sbjct: 135 SDTSPTTPGGGGGYSPTPSDTPPSPSSDTSPTTPGGGGGYTPTPSDAPPSPSSDTSPTTP 194

Query: 239 GFGARMLPLPFXXXXXXXXXXXXXXXXXGARTSPLPFNTSSTPCFGA 99
           G G    P P                  G   +P P +T  +P  G+
Sbjct: 195 GGGGGYTPTPSDAPPSPSSDTSPTTPGGGGGYTPTPSDTPPSPSSGS 241



 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -2

Query: 416 SGTSTTTLGFGARTSPSPFDTP-NTSTSVSGSTPGFGDAMSPSPFGTPNTLSFETSNSAP 240
           S TS +T G G  +SP+P D P + S+  S +TPG G   SP+P  TP + S +TS + P
Sbjct: 109 SDTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGGGYSPTPSDTPPSPSSDTSPTTP 168

Query: 239 GFGARMLPLP 210
           G G    P P
Sbjct: 169 GGGGGYTPTP 178