BLASTX nr result

ID: Chrysanthemum21_contig00014481 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00014481
         (762 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10338.1| SM domain found in ataxin-2 [Cynara cardunculus v...    77   2e-12
ref|XP_022017267.1| polyadenylate-binding protein-interacting pr...    75   6e-12
ref|XP_023729611.1| polyadenylate-binding protein-interacting pr...    66   1e-08
gb|PLY77120.1| hypothetical protein LSAT_7X108641 [Lactuca sativa]     66   1e-08
ref|XP_022013342.1| polyadenylate-binding protein-interacting pr...    62   2e-07
gb|KZM90078.1| hypothetical protein DCAR_022557 [Daucus carota s...    60   2e-06
ref|XP_017254588.1| PREDICTED: polyadenylate-binding protein-int...    60   2e-06
gb|PNS23411.1| hypothetical protein POPTR_T066600v3 [Populus tri...    54   2e-06
gb|PNT59682.1| hypothetical protein POPTR_001G423200v3 [Populus ...    58   4e-06
gb|PNT59684.1| hypothetical protein POPTR_001G423200v3 [Populus ...    58   7e-06
gb|PNT59683.1| hypothetical protein POPTR_001G423200v3 [Populus ...    58   7e-06

>gb|KVI10338.1| SM domain found in ataxin-2 [Cynara cardunculus var. scolymus]
          Length = 496

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/43 (79%), Positives = 38/43 (88%)
 Frame = +1

Query: 4   FIGGGGQPPFVMPTHIPISQPSYPMIRPISVPGSNGFFVSKFS 132
           FI  GGQ PFV+P+HIPISQP YP+IRPISVPGSNGF VSK+S
Sbjct: 454 FIAAGGQAPFVLPSHIPISQPPYPVIRPISVPGSNGFLVSKYS 496


>ref|XP_022017267.1| polyadenylate-binding protein-interacting protein 4-like
           [Helianthus annuus]
 gb|OTF91811.1| putative ataxin 2, SM domain-containing protein [Helianthus annuus]
          Length = 401

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 31/40 (77%), Positives = 38/40 (95%)
 Frame = +1

Query: 13  GGGQPPFVMPTHIPISQPSYPMIRPISVPGSNGFFVSKFS 132
           GGGQPPFV+P+HIP+S P+YP++RPISVPGS+GF VSKFS
Sbjct: 362 GGGQPPFVLPSHIPVSHPTYPVMRPISVPGSSGFLVSKFS 401


>ref|XP_023729611.1| polyadenylate-binding protein-interacting protein 4 [Lactuca
           sativa]
          Length = 459

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 30/42 (71%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = +1

Query: 10  GGGGQPPFVMPTH-IPISQPSYPMIRPISVPGSNGFFVSKFS 132
           GGGGQ PF++P H IPISQP YP+IRP+ +PGSN F VSKFS
Sbjct: 418 GGGGQTPFMLPGHHIPISQPPYPIIRPMPLPGSNAFLVSKFS 459


>gb|PLY77120.1| hypothetical protein LSAT_7X108641 [Lactuca sativa]
          Length = 476

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 30/42 (71%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = +1

Query: 10  GGGGQPPFVMPTH-IPISQPSYPMIRPISVPGSNGFFVSKFS 132
           GGGGQ PF++P H IPISQP YP+IRP+ +PGSN F VSKFS
Sbjct: 435 GGGGQTPFMLPGHHIPISQPPYPIIRPMPLPGSNAFLVSKFS 476


>ref|XP_022013342.1| polyadenylate-binding protein-interacting protein 4-like
           [Helianthus annuus]
 gb|OTF96451.1| hypothetical protein HannXRQ_Chr15g0494351 [Helianthus annuus]
          Length = 431

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +1

Query: 4   FIGGGGQPPFVMPTHIPISQPSYPMIRPISVPGSNGFFVSKFS 132
           F+GGG  PP+V+P HIPISQ  YP+   IS+PGSNGF VSKFS
Sbjct: 392 FVGGGQAPPYVLPGHIPISQLPYPV---ISIPGSNGFLVSKFS 431


>gb|KZM90078.1| hypothetical protein DCAR_022557 [Daucus carota subsp. sativus]
          Length = 543

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 4   FIGGGGQPPFVMPTHIPISQPSYPMIRPISVP-GSNGFFVSKFS 132
           +I  G QP  V P+HIPISQP +PMIRPI VP GSNGF  SKFS
Sbjct: 500 YIAAGQQPFAVAPSHIPISQPHFPMIRPIHVPAGSNGFLGSKFS 543


>ref|XP_017254588.1| PREDICTED: polyadenylate-binding protein-interacting protein 4
           [Daucus carota subsp. sativus]
          Length = 546

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 4   FIGGGGQPPFVMPTHIPISQPSYPMIRPISVP-GSNGFFVSKFS 132
           +I  G QP  V P+HIPISQP +PMIRPI VP GSNGF  SKFS
Sbjct: 503 YIAAGQQPFAVAPSHIPISQPHFPMIRPIHVPAGSNGFLGSKFS 546


>gb|PNS23411.1| hypothetical protein POPTR_T066600v3 [Populus trichocarpa]
          Length = 69

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 24/33 (72%), Positives = 25/33 (75%)
 Frame = +1

Query: 16  GGQPPFVMPTHIPISQPSYPMIRPISVPGSNGF 114
           GGQ PFVMP+HIP  QP  P IRPI VPGSN F
Sbjct: 32  GGQQPFVMPSHIPFLQPPIPAIRPIPVPGSNTF 64


>gb|PNT59682.1| hypothetical protein POPTR_001G423200v3 [Populus trichocarpa]
          Length = 288

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 26/38 (68%), Positives = 28/38 (73%)
 Frame = +1

Query: 16  GGQPPFVMPTHIPISQPSYPMIRPISVPGSNGFFVSKF 129
           GGQ PFVMP+HIP  QP  P IRPI VPGSN  F +KF
Sbjct: 250 GGQQPFVMPSHIPFLQPPIPAIRPIPVPGSNTLFNTKF 287


>gb|PNT59684.1| hypothetical protein POPTR_001G423200v3 [Populus trichocarpa]
          Length = 522

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 26/38 (68%), Positives = 28/38 (73%)
 Frame = +1

Query: 16  GGQPPFVMPTHIPISQPSYPMIRPISVPGSNGFFVSKF 129
           GGQ PFVMP+HIP  QP  P IRPI VPGSN  F +KF
Sbjct: 484 GGQQPFVMPSHIPFLQPPIPAIRPIPVPGSNTLFNTKF 521


>gb|PNT59683.1| hypothetical protein POPTR_001G423200v3 [Populus trichocarpa]
          Length = 565

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 26/38 (68%), Positives = 28/38 (73%)
 Frame = +1

Query: 16  GGQPPFVMPTHIPISQPSYPMIRPISVPGSNGFFVSKF 129
           GGQ PFVMP+HIP  QP  P IRPI VPGSN  F +KF
Sbjct: 527 GGQQPFVMPSHIPFLQPPIPAIRPIPVPGSNTLFNTKF 564


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