BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00013844
         (427 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023742362.1| replication protein A 70 kDa DNA-binding sub...    48   4e-08
gb|KVH91342.1| Nucleic acid-binding, OB-fold [Cynara cardunculus...    50   6e-07
ref|XP_023742355.1| replication protein A 70 kDa DNA-binding sub...    45   4e-06

>ref|XP_023742362.1| replication protein A 70 kDa DNA-binding subunit A-like [Lactuca
           sativa]
          Length = 703

 Score = 47.8 bits (112), Expect(2) = 4e-08
 Identities = 23/40 (57%), Positives = 29/40 (72%)
 Frame = +3

Query: 12  YRIMLSDGSVCINGFINKKINEMIRSKQLQKGSVVQLTHF 131
           YR+ LSDGS    G +  + NE++ S+QLQKGSVVQLT F
Sbjct: 50  YRVQLSDGSFHQQGMLATQRNELVTSQQLQKGSVVQLTEF 89



 Score = 37.4 bits (85), Expect(2) = 4e-08
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +1

Query: 163 ISVRDLNVIRCNCIILGDPKPF-----SGNKTSVNEPIIPKSEEDHVDPDVNGDR 312
           I + +LNVI   C  +GDPKPF      G+  S+  P  P     +  P VNG R
Sbjct: 100 IIIINLNVIMEKCDTIGDPKPFPLKLPGGDTPSMTRPSPPTQSPSNQPPTVNGTR 154


>gb|KVH91342.1| Nucleic acid-binding, OB-fold [Cynara cardunculus var. scolymus]
          Length = 833

 Score = 49.7 bits (117), Expect(2) = 6e-07
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +3

Query: 12  YRIMLSDGSVCINGFINKKINEMIRSKQLQKGSVVQLTHFSSIT 143
           YR++LSDG     G +  + NE++RS+QLQKGS+VQLT F+  T
Sbjct: 51  YRVLLSDGLFHQQGMLATQCNELVRSQQLQKGSIVQLTEFACNT 94



 Score = 31.2 bits (69), Expect(2) = 6e-07
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
 Frame = +1

Query: 163 ISVRDLNVIRCNCIILGDPKPF----SGNKTS 246
           I + DLNVI   C ++GDPKPF    SG++ S
Sbjct: 101 IIIIDLNVILDKCDLIGDPKPFPLKPSGSEAS 132


>ref|XP_023742355.1| replication protein A 70 kDa DNA-binding subunit E-like [Lactuca
           sativa]
 gb|PLY67272.1| hypothetical protein LSAT_5X58641 [Lactuca sativa]
          Length = 315

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 21/44 (47%), Positives = 31/44 (70%)
 Frame = +3

Query: 12  YRIMLSDGSVCINGFINKKINEMIRSKQLQKGSVVQLTHFSSIT 143
           YR++LSDG     G ++   +E++ S+QLQKGS+V+LT F  IT
Sbjct: 52  YRVLLSDGYFHRQGVLSANRSELVTSQQLQKGSIVKLTKFLCIT 95



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +1

Query: 163 ISVRDLNVIRCNCIILGDPKPFSGNKTSVNE 255
           I + DLNVI   C I+GDPKPF     S N+
Sbjct: 102 IKIIDLNVILGGCDIIGDPKPFPHELPSNNQ 132