BLASTX nr result

ID: Chrysanthemum21_contig00013292 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00013292
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY84830.1| hypothetical protein LSAT_4X90541 [Lactuca sativa]      89   7e-20

>gb|PLY84830.1| hypothetical protein LSAT_4X90541 [Lactuca sativa]
          Length = 115

 Score = 89.0 bits (219), Expect = 7e-20
 Identities = 60/118 (50%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
 Frame = -3

Query: 478 MSPAWSSHGVVTMLATTIAVSGTMIFXXXXXXXXXXXXSIKNRDLNHAESPPQT---PRR 308
           MSP WSS GVV   AT +AVSGTMI               +N D N AE+PP     PRR
Sbjct: 1   MSPVWSSQGVV--FATAMAVSGTMILLSLLRSTATFSD--ENGDSNTAEAPPPPTPPPRR 56

Query: 307 RSCLSSXXXXXXXXXKVRFAENVKD--------IEYVSNCGSETMDFNGARSLLVEFS 158
           RSCLS+         KVRF ENV+D        IEY SNC  ETMD NGAR+LLVE S
Sbjct: 57  RSCLSTVKKDGRMKKKVRFLENVEDTDRKAWREIEYASNCKIETMDLNGARTLLVEVS 114


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