BLASTX nr result

ID: Chrysanthemum21_contig00012887 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00012887
         (510 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH92168.1| Nuclear fragile X mental retardation-interacting ...    60   3e-07
ref|XP_021981899.1| uncharacterized protein LOC110877967 isoform...    59   7e-07
ref|XP_021981897.1| uncharacterized protein LOC110877967 isoform...    59   7e-07

>gb|KVH92168.1| Nuclear fragile X mental retardation-interacting protein 1,
           conserved domain-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 627

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 31/49 (63%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
 Frame = -3

Query: 241 NHGNVPGNIGG-WVESLHKNSTGHKTNDASVKGFKSH----KHVKEKFG 110
           NHGN+P N    W ES  KN TGHK ND S KGFKS     KHVKEKFG
Sbjct: 320 NHGNIPANGNAKWTESQRKNFTGHKRNDLSHKGFKSQFQHAKHVKEKFG 368


>ref|XP_021981899.1| uncharacterized protein LOC110877967 isoform X2 [Helianthus annuus]
 gb|OTG14519.1| hypothetical protein HannXRQ_Chr09g0250361 [Helianthus annuus]
          Length = 495

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -3

Query: 241 NHGNVPGNI-GGWVESLHKNSTGHKTNDASVKGFKSHKHVKEKFG 110
           NH + P N+ GGW E  HK  TGHKT D S KG K HKH K+KFG
Sbjct: 212 NHKSGPTNVNGGWTEGQHKKFTGHKTYDPSQKGSKIHKHAKQKFG 256


>ref|XP_021981897.1| uncharacterized protein LOC110877967 isoform X1 [Helianthus annuus]
 ref|XP_021981898.1| uncharacterized protein LOC110877967 isoform X1 [Helianthus annuus]
          Length = 496

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -3

Query: 241 NHGNVPGNI-GGWVESLHKNSTGHKTNDASVKGFKSHKHVKEKFG 110
           NH + P N+ GGW E  HK  TGHKT D S KG K HKH K+KFG
Sbjct: 212 NHKSGPTNVNGGWTEGQHKKFTGHKTYDPSQKGSKIHKHAKQKFG 256


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