BLASTX nr result

ID: Chrysanthemum21_contig00012842 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00012842
         (474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023734799.1| uncharacterized protein LOC111882658 [Lactuc...    88   2e-17
ref|XP_021977181.1| uncharacterized protein LOC110872645 [Helian...    87   4e-17
ref|XP_023734801.1| putative DNA-binding protein At1g48610 [Lact...    73   1e-12
gb|KVI07811.1| AT hook, DNA-binding motif-containing protein [Cy...    73   3e-12
ref|XP_021977725.1| uncharacterized protein LOC110873108 [Helian...    72   7e-12
gb|PLY95329.1| hypothetical protein LSAT_8X145000 [Lactuca sativa]     57   2e-06
ref|XP_023750799.1| uncharacterized protein LOC111899148 [Lactuc...    57   2e-06

>ref|XP_023734799.1| uncharacterized protein LOC111882658 [Lactuca sativa]
 gb|PLY73066.1| hypothetical protein LSAT_2X12280 [Lactuca sativa]
          Length = 418

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 53/108 (49%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = -3

Query: 412 PVTVPLAGNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-KVTNLTGLQLARPAKD 236
           PVTVPL+GNVL                                 +   LTG  L +P+  
Sbjct: 267 PVTVPLSGNVLAPRRRPKRAGRLNVGGVNGGVVESRRSGRPYVSRFGRLTGKPLNKPSNV 326

Query: 235 GPGTAVLVTDPRQLVVYQELMGKYELLQSKVKQVAGVVKSCIDPDYGS 92
           G GTAV+VTDPRQLVVYQEL  KY+LLQSKVKQ A  VK CIDP+YGS
Sbjct: 327 GRGTAVIVTDPRQLVVYQELKTKYDLLQSKVKQFAIAVKPCIDPNYGS 374


>ref|XP_021977181.1| uncharacterized protein LOC110872645 [Helianthus annuus]
 gb|OTG18288.1| putative histone H5, AT hook-like protein [Helianthus annuus]
          Length = 431

 Score = 87.4 bits (215), Expect = 4e-17
 Identities = 43/61 (70%), Positives = 48/61 (78%)
 Frame = -3

Query: 271 LTGLQLARPAKDGPGTAVLVTDPRQLVVYQELMGKYELLQSKVKQVAGVVKSCIDPDYGS 92
           L G      +K GPGTAVLVTDP QLVVYQEL  KYE LQSKVKQVA +VKSCIDPD+G+
Sbjct: 341 LVGKSFGSISKGGPGTAVLVTDPEQLVVYQELKSKYEHLQSKVKQVASMVKSCIDPDFGN 400

Query: 91  S 89
           +
Sbjct: 401 T 401


>ref|XP_023734801.1| putative DNA-binding protein At1g48610 [Lactuca sativa]
 gb|PLY73060.1| hypothetical protein LSAT_2X12341 [Lactuca sativa]
          Length = 238

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = -3

Query: 280 VTNLTGLQLARPAKDGPGTAVLVTDPRQLVVYQELMGKYELLQSKVKQVAGVVKSCID 107
           +  L G  L +P K G GTA++VTDPRQLVVYQEL  KY+LLQSKVK+V  V+K  ID
Sbjct: 163 IAKLIGKTLGKPNKVGAGTAIVVTDPRQLVVYQELKTKYDLLQSKVKEVVNVIKPHID 220


>gb|KVI07811.1| AT hook, DNA-binding motif-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 353

 Score = 73.2 bits (178), Expect = 3e-12
 Identities = 44/85 (51%), Positives = 49/85 (57%)
 Frame = -3

Query: 271 LTGLQLARPAKDGPGTAVLVTDPRQLVVYQELMGKYELLQSKVKQVAGVVKSCIDPDYGS 92
           LTG  + RP+K G GTAVLVTDPRQL             QSKVKQVA VVK CIDP+YG+
Sbjct: 282 LTGKPVGRPSKIGSGTAVLVTDPRQL-------------QSKVKQVASVVKPCIDPNYGN 328

Query: 91  SXXXXXXXXXXXXXXXANAPSHDQT 17
           +               ANAPSH QT
Sbjct: 329 AALGALQELETLAGADANAPSHIQT 353


>ref|XP_021977725.1| uncharacterized protein LOC110873108 [Helianthus annuus]
 gb|OTG18824.1| putative high mobility group A5 [Helianthus annuus]
          Length = 384

 Score = 72.4 bits (176), Expect = 7e-12
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = -3

Query: 247 PAKDGPGTAVLVTDPRQLVVYQELMGKYELLQSKVKQVAGVVKSCIDPDY 98
           P+K GPGTAV+VTDP QLV YQEL  KYE LQSK K+V GVV+  I+PDY
Sbjct: 307 PSKVGPGTAVIVTDPHQLVAYQELKLKYEHLQSKAKEVVGVVRPYINPDY 356


>gb|PLY95329.1| hypothetical protein LSAT_8X145000 [Lactuca sativa]
          Length = 441

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -3

Query: 283 KVTNLTGLQLARPAKDGPGTAVLVTDPRQLVVYQELMGKYELLQSKVKQVAGVVKSCID 107
           K+ N T      PA+  PGT+VLVTDP+QLV +QEL  KYE LQ K ++V  V +  I+
Sbjct: 360 KLQNSTSQSFGWPAEFVPGTSVLVTDPQQLVAFQELKSKYEHLQLKAREVLNVARPYIN 418


>ref|XP_023750799.1| uncharacterized protein LOC111899148 [Lactuca sativa]
          Length = 479

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/59 (49%), Positives = 38/59 (64%)
 Frame = -3

Query: 283 KVTNLTGLQLARPAKDGPGTAVLVTDPRQLVVYQELMGKYELLQSKVKQVAGVVKSCID 107
           K+ N T      PA+  PGT+VLVTDP+QLV +QEL  KYE LQ K ++V  V +  I+
Sbjct: 398 KLQNSTSQSFGWPAEFVPGTSVLVTDPQQLVAFQELKSKYEHLQLKAREVLNVARPYIN 456


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