BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00012825
         (2830 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023732824.1| DNA-directed RNA polymerase I subunit 2 [Lac...  1396   0.0  
gb|PLY74530.1| hypothetical protein LSAT_7X31561 [Lactuca sativa]    1378   0.0  
ref|XP_022035554.1| DNA-directed RNA polymerase I subunit 2 [Hel...  1348   0.0  
gb|OTG29143.1| putative nuclear RNA polymerase A2 [Helianthus an...  1348   0.0  
gb|KVI11384.1| DNA-directed RNA polymerase, subunit 2 [Cynara ca...  1296   0.0  
ref|XP_011087223.1| DNA-directed RNA polymerase I subunit 2 [Ses...  1199   0.0  
emb|CDP07938.1| unnamed protein product [Coffea canephora]           1197   0.0  
ref|XP_015061653.1| PREDICTED: DNA-directed RNA polymerase I sub...  1194   0.0  
ref|XP_016537583.1| PREDICTED: DNA-directed RNA polymerase I sub...  1193   0.0  
gb|PHT94611.1| hypothetical protein T459_02493 [Capsicum annuum]     1193   0.0  
gb|PHT60196.1| hypothetical protein CQW23_02559 [Capsicum baccatum]  1192   0.0  
ref|XP_010324252.1| PREDICTED: DNA-directed RNA polymerase I sub...  1191   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1191   0.0  
ref|XP_006366498.1| PREDICTED: DNA-directed RNA polymerase I sub...  1190   0.0  
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1189   0.0  
ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub...  1189   0.0  
emb|CBI35100.3| unnamed protein product, partial [Vitis vinifera]    1189   0.0  
ref|XP_009795429.1| PREDICTED: DNA-directed RNA polymerase I sub...  1181   0.0  
ref|XP_019245498.1| PREDICTED: DNA-directed RNA polymerase I sub...  1180   0.0  
gb|OIT03208.1| dna-directed rna polymerase i subunit 2 [Nicotian...  1180   0.0  

>ref|XP_023732824.1| DNA-directed RNA polymerase I subunit 2 [Lactuca sativa]
          Length = 1189

 Score = 1396 bits (3614), Expect = 0.0
 Identities = 704/865 (81%), Positives = 756/865 (87%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            F  K   ++   + ++ +T  +Y +     R  F      +L+ +     ALIDTT HEI
Sbjct: 203  FTDKAVVIRCVREDQSAVTLNLYYISNGSARVGFRIRGRENLLPIGLVLKALIDTTDHEI 262

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            F SLTSVYN+KYEKA+GCVGTQIL ERAKIIL+EV+DL LFTRIQCL+YIGEYFKPFM G
Sbjct: 263  FMSLTSVYNEKYEKAMGCVGTQILSERAKIILNEVRDLNLFTRIQCLQYIGEYFKPFMDG 322

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            MEN+S+SAVA+AVLREF+LVHL+NNHDKFNL IFMVQKLFSFIDQTSIPDNPDSLQTQEV
Sbjct: 323  MENESHSAVADAVLREFILVHLDNNHDKFNLLIFMVQKLFSFIDQTSIPDNPDSLQTQEV 382

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHLVTIYVKEKLQEWL KAK+LLQDEA+ RKKNF+FGSL DVKKALDKNP+KQVG A
Sbjct: 383  LLPGHLVTIYVKEKLQEWLLKAKKLLQDEADNRKKNFEFGSLADVKKALDKNPAKQVGSA 442

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLVTQSTLDLKEKAGMTV AERLNFLRFLSHFRAVHRGSSLA LRTTSVRKL
Sbjct: 443  VENMLKTGRLVTQSTLDLKEKAGMTVQAERLNFLRFLSHFRAVHRGSSLAGLRTTSVRKL 502

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGFVCPVHTPDGSPCGLLNH+TASCR+TSYYDSEG IRDFSKI KSIL+VLVGAGM
Sbjct: 503  LPESWGFVCPVHTPDGSPCGLLNHLTASCRITSYYDSEGIIRDFSKINKSILSVLVGAGM 562

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             PA+PKLVKAGPPE+LHVLL+GRVVG IP D VEKAV+HLRKLKL A SAIPEDLEVGYV
Sbjct: 563  TPAIPKLVKAGPPEILHVLLDGRVVGAIPTDIVEKAVNHLRKLKLLAASAIPEDLEVGYV 622

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            PISM GAFPGL+LFTSP+RF+RPVKQKF P E+ NNIELIGPFEQVYMEIECPDGGNGGR
Sbjct: 623  PISMGGAFPGLYLFTSPSRFIRPVKQKF-PEEKNNNIELIGPFEQVYMEIECPDGGNGGR 681

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
            L EFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS          
Sbjct: 682  LKEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQGINCRADQK 741

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH
Sbjct: 742  LYHLQTPQAPIVRTATYEKYRIDDSPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 801

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTE+IDLADEK+KS   N+VFRRSNLD+KSH+FIDSDGLPYVGQ++KPGEPYYS Y
Sbjct: 802  GHIYQTESIDLADEKNKSNRANRVFRRSNLDKKSHSFIDSDGLPYVGQKIKPGEPYYSMY 861

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEVTS +F+ +LKGSE VTVDYVA+DVKNKKQLQKANIRLRRGRNP+IGDKFSSRHGQKG
Sbjct: 862  NEVTSTSFNQKLKGSEPVTVDYVAIDVKNKKQLQKANIRLRRGRNPVIGDKFSSRHGQKG 921

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF
Sbjct: 922  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 981

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            SSSVKKPD   E+E D L+NELGSMLTSRGFN YGTEVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 982  SSSVKKPDGTLENEEDSLVNELGSMLTSRGFNFYGTEVLYSGVYGTELTCEIFIGPVYYQ 1041

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1042 RLRHMVSDKFQVRSTGTVDQVTRQP 1066


>gb|PLY74530.1| hypothetical protein LSAT_7X31561 [Lactuca sativa]
          Length = 1145

 Score = 1378 bits (3567), Expect = 0.0
 Identities = 698/865 (80%), Positives = 750/865 (86%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            F  K   ++   + ++ +T  +Y +     R  F      +L+ +     ALIDTT HEI
Sbjct: 165  FTDKAVVIRCVREDQSAVTLNLYYISNGSARVGFRIRGRENLLPIGLVLKALIDTTDHEI 224

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            F SLTSVYN+KYEKA+GCVGTQIL ERAKIIL+EV+DL LFTRIQCL+YIGEYFKPFM G
Sbjct: 225  FMSLTSVYNEKYEKAMGCVGTQILSERAKIILNEVRDLNLFTRIQCLQYIGEYFKPFMDG 284

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            MEN+S+SAVA+AVLREF+LVHL+NNHDKFNL IFMVQKLFSFIDQTSIPDNPDSLQTQEV
Sbjct: 285  MENESHSAVADAVLREFILVHLDNNHDKFNLLIFMVQKLFSFIDQTSIPDNPDSLQTQEV 344

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHLVTIYVKEKLQEWL KAK+LLQDEA+ RKKNF+FGSL DVKKALDKNP+KQVG A
Sbjct: 345  LLPGHLVTIYVKEKLQEWLLKAKKLLQDEADNRKKNFEFGSLADVKKALDKNPAKQVGSA 404

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLVTQSTLDLKEKAGMTV AERLNFLRFLSHFRAVHRGSSLA LRTTSVRKL
Sbjct: 405  VENMLKTGRLVTQSTLDLKEKAGMTVQAERLNFLRFLSHFRAVHRGSSLAGLRTTSVRKL 464

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGFVCPVHTPDGSPCGLLNH+TASCR+TSYYDSEG IRDFSKI KSIL+VLVGAGM
Sbjct: 465  LPESWGFVCPVHTPDGSPCGLLNHLTASCRITSYYDSEGIIRDFSKINKSILSVLVGAGM 524

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             PA+PKLVKAGPPE+LHVLL+GRVVG IP D VEKAV+HLRKLKL A SAIPEDLEVGYV
Sbjct: 525  TPAIPKLVKAGPPEILHVLLDGRVVGAIPTDIVEKAVNHLRKLKLLAASAIPEDLEVGYV 584

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            PISM GAFPGL+LFTSP+RF+RPVKQKF P E+ NNIELIGPFEQVYMEIECPDGGNGGR
Sbjct: 585  PISMGGAFPGLYLFTSPSRFIRPVKQKF-PEEKNNNIELIGPFEQVYMEIECPDGGNGGR 643

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
            L EFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS          
Sbjct: 644  LKEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQGINCRADQK 703

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH
Sbjct: 704  LYHLQTPQAPIVRTATYEKYRIDDSPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 763

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTE+IDLADEK+KS   N+VFRRSNLD+KSH+FIDSDGLPYVGQ++KPGEPYYS Y
Sbjct: 764  GHIYQTESIDLADEKNKSNRANRVFRRSNLDKKSHSFIDSDGLPYVGQKIKPGEPYYSMY 823

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEVTS +F+ +LKGSE VTVDYVA+DVKNKKQLQKANIRLRRGRNP+IGDKFSSRHGQKG
Sbjct: 824  NEVTSTSFNQKLKGSEPVTVDYVAIDVKNKKQLQKANIRLRRGRNPVIGDKFSSRHGQKG 883

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF
Sbjct: 884  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 943

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            SSSVKKPD   E+E D L+NELGSMLTSRGFN YGTEVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 944  SSSVKKPDGTLENEEDSLVNELGSMLTSRGFNFYGTEVLYSGVYGTELTCEIFIGPVYYQ 1003

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHM      VRSTGTVDQVTRQP
Sbjct: 1004 RLRHM------VRSTGTVDQVTRQP 1022


>ref|XP_022035554.1| DNA-directed RNA polymerase I subunit 2 [Helianthus annuus]
          Length = 1190

 Score = 1348 bits (3490), Expect = 0.0
 Identities = 679/865 (78%), Positives = 738/865 (85%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            F  K   ++   + ++ +T  +Y L     R  F      +L+ +     ALIDTT HEI
Sbjct: 200  FTDKAVIIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDTTDHEI 259

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            F SLTSVY+ KYEKA GCVGTQIL ERA IIL+EVKDL L+TRIQCLEYIGEYFKPFM G
Sbjct: 260  FLSLTSVYHAKYEKAKGCVGTQILSERAMIILNEVKDLSLYTRIQCLEYIGEYFKPFMDG 319

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            ME+DSY AVA+AV+R+FVLVHL +NHDKFNL IFMVQKLFSFIDQTSIPDNPDSLQTQEV
Sbjct: 320  MEHDSYPAVADAVMRDFVLVHLESNHDKFNLLIFMVQKLFSFIDQTSIPDNPDSLQTQEV 379

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHLVTIY+KE+LQEWL KAKRLLQDEA  RKKNFDFGSL D+K ALDKNPSKQVGQA
Sbjct: 380  LLPGHLVTIYIKERLQEWLLKAKRLLQDEANNRKKNFDFGSLADIKHALDKNPSKQVGQA 439

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLV+  TLDLKEKAGMTV AERLN+LRFLSHFRAVHRGSSLA LRTTSVRKL
Sbjct: 440  VENMLKTGRLVSSLTLDLKEKAGMTVQAERLNYLRFLSHFRAVHRGSSLAGLRTTSVRKL 499

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGFVCPVHTPDG+PCGLLNH+TASCR+TS+YDS+G IRDF+K+QKSIL+VLV AGM
Sbjct: 500  LPESWGFVCPVHTPDGTPCGLLNHLTASCRITSFYDSQGKIRDFTKLQKSILSVLVAAGM 559

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P++PKLVKAGPPEVLHVLL+GRV+G IP DR+EK V+HLR LKLSA S IPEDLEVGYV
Sbjct: 560  TPSIPKLVKAGPPEVLHVLLDGRVIGTIPTDRIEKTVNHLRSLKLSAASMIPEDLEVGYV 619

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            PISM GAFPGL+LFT+P+RFVRPV+QKFPPP E NNIELIGPFEQVYMEIECPDGGNGGR
Sbjct: 620  PISMGGAFPGLYLFTNPSRFVRPVRQKFPPPGENNNIELIGPFEQVYMEIECPDGGNGGR 679

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
            L+EFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS          
Sbjct: 680  LNEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQGINCRADQK 739

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH
Sbjct: 740  VYHLQTPQTPIVRTATYEKYLIDESPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 799

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTE+IDLADEK+KS   N++FRRSN D+ SH+FID DGLPYVGQR+KPGEPY+S Y
Sbjct: 800  GHIYQTESIDLADEKAKSDRANRIFRRSNQDKVSHSFIDQDGLPYVGQRIKPGEPYFSTY 859

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEV+  +F+ +LKGSE VTVDYVAVDVK KKQ+ KANIRLRRGRNPIIGDKFSSRHGQKG
Sbjct: 860  NEVSGASFNQKLKGSEPVTVDYVAVDVKTKKQITKANIRLRRGRNPIIGDKFSSRHGQKG 919

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF
Sbjct: 920  VCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 979

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            SSSV K D   E E DPL+NEL SMLT+RGFN+ GTEVLYSG+YG EL CEIFIGPVYYQ
Sbjct: 980  SSSVNKSD---ESEGDPLVNELFSMLTARGFNYSGTEVLYSGVYGKELKCEIFIGPVYYQ 1036

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1037 RLRHMVSDKFQVRSTGTVDQVTRQP 1061


>gb|OTG29143.1| putative nuclear RNA polymerase A2 [Helianthus annuus]
          Length = 1201

 Score = 1348 bits (3490), Expect = 0.0
 Identities = 679/865 (78%), Positives = 738/865 (85%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            F  K   ++   + ++ +T  +Y L     R  F      +L+ +     ALIDTT HEI
Sbjct: 211  FTDKAVIIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDTTDHEI 270

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            F SLTSVY+ KYEKA GCVGTQIL ERA IIL+EVKDL L+TRIQCLEYIGEYFKPFM G
Sbjct: 271  FLSLTSVYHAKYEKAKGCVGTQILSERAMIILNEVKDLSLYTRIQCLEYIGEYFKPFMDG 330

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            ME+DSY AVA+AV+R+FVLVHL +NHDKFNL IFMVQKLFSFIDQTSIPDNPDSLQTQEV
Sbjct: 331  MEHDSYPAVADAVMRDFVLVHLESNHDKFNLLIFMVQKLFSFIDQTSIPDNPDSLQTQEV 390

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHLVTIY+KE+LQEWL KAKRLLQDEA  RKKNFDFGSL D+K ALDKNPSKQVGQA
Sbjct: 391  LLPGHLVTIYIKERLQEWLLKAKRLLQDEANNRKKNFDFGSLADIKHALDKNPSKQVGQA 450

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLV+  TLDLKEKAGMTV AERLN+LRFLSHFRAVHRGSSLA LRTTSVRKL
Sbjct: 451  VENMLKTGRLVSSLTLDLKEKAGMTVQAERLNYLRFLSHFRAVHRGSSLAGLRTTSVRKL 510

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGFVCPVHTPDG+PCGLLNH+TASCR+TS+YDS+G IRDF+K+QKSIL+VLV AGM
Sbjct: 511  LPESWGFVCPVHTPDGTPCGLLNHLTASCRITSFYDSQGKIRDFTKLQKSILSVLVAAGM 570

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P++PKLVKAGPPEVLHVLL+GRV+G IP DR+EK V+HLR LKLSA S IPEDLEVGYV
Sbjct: 571  TPSIPKLVKAGPPEVLHVLLDGRVIGTIPTDRIEKTVNHLRSLKLSAASMIPEDLEVGYV 630

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            PISM GAFPGL+LFT+P+RFVRPV+QKFPPP E NNIELIGPFEQVYMEIECPDGGNGGR
Sbjct: 631  PISMGGAFPGLYLFTNPSRFVRPVRQKFPPPGENNNIELIGPFEQVYMEIECPDGGNGGR 690

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
            L+EFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS          
Sbjct: 691  LNEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQGINCRADQK 750

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH
Sbjct: 751  VYHLQTPQTPIVRTATYEKYLIDESPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 810

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTE+IDLADEK+KS   N++FRRSN D+ SH+FID DGLPYVGQR+KPGEPY+S Y
Sbjct: 811  GHIYQTESIDLADEKAKSDRANRIFRRSNQDKVSHSFIDQDGLPYVGQRIKPGEPYFSTY 870

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEV+  +F+ +LKGSE VTVDYVAVDVK KKQ+ KANIRLRRGRNPIIGDKFSSRHGQKG
Sbjct: 871  NEVSGASFNQKLKGSEPVTVDYVAVDVKTKKQITKANIRLRRGRNPIIGDKFSSRHGQKG 930

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF
Sbjct: 931  VCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 990

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            SSSV K D   E E DPL+NEL SMLT+RGFN+ GTEVLYSG+YG EL CEIFIGPVYYQ
Sbjct: 991  SSSVNKSD---ESEGDPLVNELFSMLTARGFNYSGTEVLYSGVYGKELKCEIFIGPVYYQ 1047

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1048 RLRHMVSDKFQVRSTGTVDQVTRQP 1072


>gb|KVI11384.1| DNA-directed RNA polymerase, subunit 2 [Cynara cardunculus var.
            scolymus]
          Length = 1138

 Score = 1296 bits (3353), Expect = 0.0
 Identities = 663/865 (76%), Positives = 713/865 (82%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            F  K   ++   + ++ +T  +Y L     R  F      +L+ +     ALID T HEI
Sbjct: 182  FTDKAVVIRCVREDQSAVTLNLYYLSNGSARVGFRIRGRENLLPIGLVLKALIDATDHEI 241

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            F SL SVYNDKYEKA G VGTQIL ERAKIIL+EV+DL LFTRIQCL YIGEYFKPFM G
Sbjct: 242  FMSLISVYNDKYEKAKGSVGTQILSERAKIILNEVRDLSLFTRIQCLHYIGEYFKPFMDG 301

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            MEN+S+SAVA+AVLREF+LVHL+NNHDKFNL IFMVQKLFSFIDQTS+PDNPDSLQTQEV
Sbjct: 302  MENESHSAVADAVLREFILVHLDNNHDKFNLLIFMVQKLFSFIDQTSVPDNPDSLQTQEV 361

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIYVKEKLQEWL K KR LQ+E + RKKNF+FGSL DVKKALDKNP+KQVG +
Sbjct: 362  LLPGHLITIYVKEKLQEWLLKTKRQLQEETKNRKKNFEFGSLADVKKALDKNPAKQVGLS 421

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLVTQSTLDLKEKAGMTV AERLNFLRF+SHFRAVHRGSSLA LRTTSVRKL
Sbjct: 422  VENMLKTGRLVTQSTLDLKEKAGMTVQAERLNFLRFVSHFRAVHRGSSLAGLRTTSVRKL 481

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDGSPCGLLNHMTASCR+TSYYDSEG IRDFSKIQKSIL+VLVGAGM
Sbjct: 482  LPESWGFICPVHTPDGSPCGLLNHMTASCRITSYYDSEGIIRDFSKIQKSILSVLVGAGM 541

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
            IPALPKLVKAGPPEVLHVLL+GRVVG IP DRVEKAVSHLRKLKLSATSAIPEDLEVGYV
Sbjct: 542  IPALPKLVKAGPPEVLHVLLDGRVVGAIPTDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 601

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            PISM GAFPGL+LFTSP+RFVRPV+QKF PPE  NNIELIGPFEQVYMEIEC DGGNGGR
Sbjct: 602  PISMGGAFPGLYLFTSPSRFVRPVRQKFLPPEGNNNIELIGPFEQVYMEIECADGGNGGR 661

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
            L+EFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS          
Sbjct: 662  LNEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQGINCRADQK 721

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH
Sbjct: 722  LYHLQTPQTPIVRTATYEKYRIDDSPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 781

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            G+IYQTE+ID ADEK KS  G +VFRR+    ++H+FIDSDGLPY+GQ +KPGEPYYS Y
Sbjct: 782  GYIYQTESIDFADEKIKSDRGQRVFRRNYTKTETHSFIDSDGLPYIGQMIKPGEPYYSTY 841

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEVTS A   RLKGSE   VDYVAVDVKNKKQLQKANIRLRRGR P+IGDKFSSRHGQKG
Sbjct: 842  NEVTSKASDARLKGSEPAIVDYVAVDVKNKKQLQKANIRLRRGRKPVIGDKFSSRHGQKG 901

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFSA                               GGSLHG FV+ATPF
Sbjct: 902  VCSQLWPDVDMPFSA-------------------------------GGSLHGNFVNATPF 930

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            SSSVKKPD  PE+ESD L++ELGS+LT+RGFNHYG EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 931  SSSVKKPDGTPENESDSLVDELGSLLTARGFNHYGVEVLYSGVYGTELTCEIFIGPVYYQ 990

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 991  RLRHMVSDKFQVRSTGTVDQVTRQP 1015


>ref|XP_011087223.1| DNA-directed RNA polymerase I subunit 2 [Sesamum indicum]
          Length = 1196

 Score = 1199 bits (3103), Expect = 0.0
 Identities = 598/865 (69%), Positives = 692/865 (80%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ +T  +Y L     R  F       L+ V     ALIDTT HEI
Sbjct: 207  YSDKAVVIRCVREDQSAVTVKLYYLNNGSARLGFWIQGREYLLPVGIIMKALIDTTDHEI 266

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + SLT  YN+KY++  G VGTQ++GERAKIIL E++++ L+TR QCL++IGE+F+P M G
Sbjct: 267  YVSLTCCYNEKYDRVKGSVGTQLVGERAKIILDELQNMSLYTRAQCLQHIGEHFQPLMAG 326

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            +E +SYS VA+AVLR+++ VHL++N DKFNL IFM+QKLFS +DQTS+PDNPDSLQ QEV
Sbjct: 327  LEKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEV 386

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL KAKR LQDE + R K F+  SL DVKK ++KN  +Q+G A
Sbjct: 387  LLPGHLITIYLKEKLQDWLLKAKRTLQDEVDNRTKKFELSSLADVKKVIEKNTPRQIGAA 446

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E +LKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 447  IENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 506

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLN+MT+SCR+TSYYDS+G ++DF +++KSIL VLV  GM
Sbjct: 507  LPESWGFLCPVHTPDGEPCGLLNNMTSSCRITSYYDSKGKVKDFLEVRKSILKVLVSIGM 566

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P+LPKLV+AGPPEVL VLL+GRVVG I +D +EKAV HLR+LK++AT AIPEDLEVGY+
Sbjct: 567  TPSLPKLVQAGPPEVLPVLLDGRVVGSIASDIIEKAVCHLRRLKVAATFAIPEDLEVGYI 626

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL LFTS +RFVRPV+    PPEE NNIELIGPFEQVYMEI CPDGG+GGR
Sbjct: 627  PLSMGGAYPGLHLFTSASRFVRPVRNILIPPEEGNNIELIGPFEQVYMEISCPDGGDGGR 686

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFS           
Sbjct: 687  KNVFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQALVARADQK 746

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG   
Sbjct: 747  LYHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCR 806

Query: 1814 GHIYQTETIDLADE--KSKSGNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            G+IYQTETIDL ++  +S    + F RSNLDR +H  IDSDGLPYVGQR+ P EPY S Y
Sbjct: 807  GYIYQTETIDLTEQNLRSDRSQRSFGRSNLDRSTHHLIDSDGLPYVGQRISPNEPYCSIY 866

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   +N+LKGSE V VDYVAVDVKNKK +QKANIRLR  RNPIIGDKFSSRHGQKG
Sbjct: 867  NEITSKVTTNKLKGSEPVYVDYVAVDVKNKKHIQKANIRLRHPRNPIIGDKFSSRHGQKG 926

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD DMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHG FVDATPF
Sbjct: 927  VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 986

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            SSS+KK     E ES  L++ELGSML +RGFN++G EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 987  SSSMKKNSVGSESESSSLVDELGSMLIARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1046

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1047 RLRHMVSDKFQVRSTGTVDQVTRQP 1071


>emb|CDP07938.1| unnamed protein product [Coffea canephora]
          Length = 1209

 Score = 1197 bits (3096), Expect = 0.0
 Identities = 595/865 (68%), Positives = 692/865 (80%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       ++ V     AL DTT HEI
Sbjct: 223  YTDKAVVIRCVREDQSAVSLRLYYLSNGSARLAFWIQGREYMLPVGVMLKALADTTDHEI 282

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            F  LTS Y+D Y+   G VG+Q++GERAKIIL EV+DL LFT  QCL++IGE+F+P M G
Sbjct: 283  FACLTSCYDDNYDCVKGSVGSQLVGERAKIILDEVQDLSLFTHKQCLQHIGEHFQPVMIG 342

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            +EN+S S VA AVL++++ VHL+NNHDKFNL IFMVQKLFS +D TS+PDNPDSLQ  EV
Sbjct: 343  LENESPSVVAAAVLKDYIFVHLDNNHDKFNLLIFMVQKLFSLVDHTSMPDNPDSLQNHEV 402

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQEWL K K LLQDEA +  K FD  SL D+KK ++KN  KQ+  A
Sbjct: 403  LLPGHLITIYLKEKLQEWLLKTKNLLQDEANSSNK-FDINSLADIKKLIEKNSPKQISSA 461

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            ++ MLKTG L+TQS LDL+++AGMTV AERLNFLRFLSHFRAVHRGSS A LRTT+VRKL
Sbjct: 462  IDNMLKTGTLLTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGSSFAGLRTTTVRKL 521

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHM++SCR+TSYYD++G++RDF K + SIL+VLVG GM
Sbjct: 522  LPESWGFLCPVHTPDGEPCGLLNHMSSSCRITSYYDNKGNVRDFLKTRMSILSVLVGVGM 581

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P+LPKLV+AGPP+VL VLL+GRVVG IP+D VEKAV+H+R+LKLSAT+ IPEDLEVGYV
Sbjct: 582  TPSLPKLVQAGPPKVLSVLLDGRVVGSIPSDLVEKAVTHMRRLKLSATAQIPEDLEVGYV 641

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGLFLFTSP+RFVRPV+    PPEE N  ELIGPFEQVYMEI CPDGG GGR
Sbjct: 642  PLSMCGAYPGLFLFTSPSRFVRPVRNISIPPEEGNKFELIGPFEQVYMEISCPDGGGGGR 701

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             S FPATHEEIHPTGILSVV NLTPWSDHNQSPRNMYQCQM KQTMGF S          
Sbjct: 702  KSMFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGKQTMGFPSQALHSRADQK 761

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSV+RG  H
Sbjct: 762  LYHLQTPQTPIVRTKAYEKYHIDEFPLGTNAIVAVLAYSGYDMEDAMVLNKSSVERGMFH 821

Query: 1814 GHIYQTETIDLADEKSKSGN--QVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL +++S SG+  ++FRRSNLD+ S   +DSDGLPYVGQR+KP EPY S Y
Sbjct: 822  GHIYQTETIDLTEQRSNSGHGQRIFRRSNLDKSSQHLVDSDGLPYVGQRIKPNEPYCSIY 881

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS+  S +LKGSE+V VDYVAVDVKNK  LQK NIR RR RNPIIGDKFSSRHGQKG
Sbjct: 882  NEITSSTSSTKLKGSESVVVDYVAVDVKNKNNLQKVNIRFRRPRNPIIGDKFSSRHGQKG 941

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD+DMPF+  TGMRPDLIINPHAFPSRMTI MLLESIAAKGG+LHGKF+DATPF
Sbjct: 942  VCSQLWPDIDMPFAGLTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGALHGKFMDATPF 1001

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            +S +KK ++  E ES  L++ELGSMLT+ GFN++G+EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 1002 TSLLKKGNEGQESESSSLVDELGSMLTAYGFNYHGSEVLYSGVYGTELTCEIFIGPVYYQ 1061

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQ+TRQP
Sbjct: 1062 RLRHMVSDKFQVRSTGTVDQITRQP 1086


>ref|XP_015061653.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Solanum
            pennellii]
          Length = 1184

 Score = 1194 bits (3088), Expect = 0.0
 Identities = 592/865 (68%), Positives = 691/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 201  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 260

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++ ++  G VGTQ++GERAKIIL EV+ L LFTR QCL +IGE+F+P + G
Sbjct: 261  YVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIG 320

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M+NDSY  VA+AVLR++V VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 321  MQNDSYKTVADAVLRDYVFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 380

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL K +R LQ+E +  KK F+  SLTDVKKA++KN  KQ+G  
Sbjct: 381  LLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLV 440

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E+MLKTGRL TQS LDL+++AGMTV AE+LNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 441  IESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 500

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+++DF K++ SILNVL+  GM
Sbjct: 501  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGM 560

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P+ PKLV+AGPPE+L VLL+GR+ G IP+D +EKAV+HLR+LKLS+TS+IP DLEVGY+
Sbjct: 561  TPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 620

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 621  PLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGR 680

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 681  KTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 740

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 741  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCH 800

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++ +KS    ++FRRSNLD+ SH  IDSDGLPYVGQR+ P EPY S Y
Sbjct: 801  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIY 860

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   S +LKGSE V VDYVAVDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 861  NEITSQTTSMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPVIGDKFSSRHGQKG 920

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFSA TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 921  VCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 980

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+++K+     E ES  L+++LGSML   GFNH+GTEVLYSG+YGTELTC IFIGPVYYQ
Sbjct: 981  SNTMKE----SESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQ 1036

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTG VD +TRQP
Sbjct: 1037 RLRHMVSDKFQVRSTGQVDHITRQP 1061


>ref|XP_016537583.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Capsicum annuum]
          Length = 1180

 Score = 1193 bits (3087), Expect = 0.0
 Identities = 591/865 (68%), Positives = 692/865 (80%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 198  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 257

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++ ++  G VGTQ++GERAKIIL EV+ L LFTR QCL +IGE+F+P M G
Sbjct: 258  YVNLTCCYNEERDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVMTG 317

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M+NDSY  VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 318  MQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 377

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL + +RLLQ+E +  KK F+  SL DVKKA+DKN  KQ+G A
Sbjct: 378  LLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLADVKKAIDKNAPKQMGLA 437

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 438  IENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 497

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+++DF K++ SILNV++  GM
Sbjct: 498  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVMIAIGM 557

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P+ PKLV+AGPPE+L VLL+GR+VG + +D +EKAV+HLR+LKLS+TS+IP DLEVGY+
Sbjct: 558  TPSSPKLVQAGPPELLSVLLDGRIVGYMSSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 617

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 618  PLSMNGAYPGLYLFTSPSRFVRPVRSISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGR 677

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FP TH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 678  KTVFPPTHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 737

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 738  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGLCH 797

Query: 1814 GHIYQTETIDLADE--KSKSGNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++  KS    ++FRRSNLD+ SH  IDSDGLPYVGQR+ P EPY S Y
Sbjct: 798  GHIYQTETIDLTEQSVKSDRAQRLFRRSNLDKSSHRLIDSDGLPYVGQRINPNEPYCSIY 857

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   S +LKGSE V VDYV+VDVKNK +LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 858  NEITSQTTSMKLKGSEPVVVDYVSVDVKNKTRLQKANIRFRRSRNPVIGDKFSSRHGQKG 917

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 918  VCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 977

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+++K+     E ES  L++ELGSMLT+ GFNH+G EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 978  SNTMKE----SESESSSLVDELGSMLTACGFNHHGVEVLYSGVYGTELTCEIFIGPVYYQ 1033

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTG +D +TRQP
Sbjct: 1034 RLRHMVSDKFQVRSTGQIDHITRQP 1058


>gb|PHT94611.1| hypothetical protein T459_02493 [Capsicum annuum]
          Length = 1143

 Score = 1193 bits (3086), Expect = 0.0
 Identities = 591/865 (68%), Positives = 691/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 161  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 220

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++ ++  G VGTQ++GERAKIIL EV+ L LFTR QCL +IGE+F+P M G
Sbjct: 221  YVNLTCCYNEERDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVMTG 280

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M+NDSY  VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 281  MQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 340

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL + +RLLQ+E +  KK F+  SL DVKKA+DKN  KQ+G A
Sbjct: 341  LLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLADVKKAIDKNAPKQMGLA 400

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 401  IENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 460

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+++DF K++ SILNV++  GM
Sbjct: 461  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVMIAIGM 520

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P+ PKLV+AGPPE+L VLL+GR+VG + +D +EKAV+HLR+LKLS+TS+IP DLEVGY+
Sbjct: 521  TPSSPKLVQAGPPELLSVLLDGRIVGYMSSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 580

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 581  PLSMNGAYPGLYLFTSPSRFVRPVRSISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGR 640

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FP TH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 641  KTVFPPTHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 700

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 701  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGLCH 760

Query: 1814 GHIYQTETIDLADE--KSKSGNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++  KS    ++FRRSNLD+ SH  IDSDGLPYVGQR+ P EPY S Y
Sbjct: 761  GHIYQTETIDLTEQSVKSDRAQRLFRRSNLDKSSHRLIDSDGLPYVGQRINPNEPYCSIY 820

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   S +LKGSE V VDYV+VDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 821  NEITSQTTSMKLKGSEPVVVDYVSVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 880

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 881  VCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 940

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+++K+     E ES  L++ELGSMLT+ GFNH+G EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 941  SNTMKE----SESESSSLVDELGSMLTACGFNHHGVEVLYSGVYGTELTCEIFIGPVYYQ 996

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTG +D +TRQP
Sbjct: 997  RLRHMVSDKFQVRSTGQIDHITRQP 1021


>gb|PHT60196.1| hypothetical protein CQW23_02559 [Capsicum baccatum]
          Length = 1173

 Score = 1192 bits (3085), Expect = 0.0
 Identities = 590/865 (68%), Positives = 692/865 (80%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V+    AL+DTT HEI
Sbjct: 191  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVAIILKALVDTTDHEI 250

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++ ++  G VGTQ++GERAKIIL EV+ L LFTR QCL +IGE+F+P M G
Sbjct: 251  YVNLTCCYNEERDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVMTG 310

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M+NDSY  VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 311  MQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 370

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL + +RLLQ+E +  KK F+  SL DVKKA+DKN  KQ+G A
Sbjct: 371  LLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLADVKKAIDKNAPKQMGLA 430

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 431  IENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 490

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+++DF K++ SILNV++  GM
Sbjct: 491  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVMIAIGM 550

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P+ PKLV+AGPPE+L VLL+GR+VG + +D +EKAV+HLR+LKLS+TS+IP DLEVGY+
Sbjct: 551  TPSSPKLVQAGPPELLSVLLDGRIVGYMSSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 610

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL++FTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 611  PLSMNGAYPGLYMFTSPSRFVRPVRSISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGR 670

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FP TH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 671  KTVFPPTHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 730

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 731  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCH 790

Query: 1814 GHIYQTETIDLADE--KSKSGNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++  KS    ++FRRSNLD+ SH  IDSDGLPYVGQR+ P EPY S Y
Sbjct: 791  GHIYQTETIDLTEQSVKSDRAQRLFRRSNLDKSSHRLIDSDGLPYVGQRINPNEPYCSIY 850

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   S +LKGSE V VDYV+VDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 851  NEITSQTTSMKLKGSEPVVVDYVSVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 910

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 911  VCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 970

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+++K+     E ES  L++ELGSMLT+ GFNH+G EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 971  SNTMKE----SESESSSLVDELGSMLTACGFNHHGVEVLYSGVYGTELTCEIFIGPVYYQ 1026

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTG +D +TRQP
Sbjct: 1027 RLRHMVSDKFQVRSTGQIDHITRQP 1051


>ref|XP_010324252.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2
            [Solanum lycopersicum]
          Length = 958

 Score = 1191 bits (3082), Expect = 0.0
 Identities = 584/818 (71%), Positives = 674/818 (82%), Gaps = 23/818 (2%)
 Frame = +2

Query: 218  FQHALIDTTGHEIFTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCL 397
            F  AL+DTT HEI+ +LT  YN++ ++  G VGTQ++GERAKIIL EV+ L LFTR QCL
Sbjct: 22   FSRALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCL 81

Query: 398  EYIGEYFKPFMFGMENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTS 577
             +IGE+F+P + GM+NDSY  VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS
Sbjct: 82   RHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTS 141

Query: 578  IPDNPDSLQTQEVLLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKK 757
            + DNPDSLQ QEVLLPGHL+TIY+KEKLQ+WL K +R LQ+E +  KK F+  SLTDVKK
Sbjct: 142  VLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKK 201

Query: 758  ALDKNPSKQVGQAVETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGS 937
            A++KN  KQ+G  +E+MLKTGRL TQS LDL+++AGMTV AE+LNFLRFLSHFRAVHRG+
Sbjct: 202  AIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGA 261

Query: 938  SLADLRTTSVRKLLPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKI 1117
            S A LRTTSVRKLLPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+++DF K+
Sbjct: 262  SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKM 321

Query: 1118 QKSILNVLVGAGMIPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSA 1297
            + SILNVL+  GM P+ PKLV+AGPPE+L VLL+GR+ G IP+D +EKAV+HLR+LKLS+
Sbjct: 322  RMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSS 381

Query: 1298 TSAIPEDLEVGYVPISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVY 1477
            TS+IP DLEVGY+P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVY
Sbjct: 382  TSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVY 441

Query: 1478 MEIECPDGGNGGRLSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMG 1657
            MEI CPDGG+GGR + FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMG
Sbjct: 442  MEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMG 501

Query: 1658 FSS---------------------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAM 1774
            FSS                                    LGTNAIVAVLAYSGYDMEDAM
Sbjct: 502  FSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAM 561

Query: 1775 VLNKSSVDRGFAHGHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVG 1948
            VLNKSSVDRG  HGHIYQTETIDL ++ +KS    ++FRRSNLD+ SH  IDSDGLPYVG
Sbjct: 562  VLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVG 621

Query: 1949 QRVKPGEPYYSKYNEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPI 2128
            QR+ P EPY S YNE+TS     +LKGSE V VDYVAVDVKNK  LQKANIR RR RNP+
Sbjct: 622  QRINPNEPYCSIYNEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPV 681

Query: 2129 IGDKFSSRHGQKGVCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKG 2308
            IGDKFSSRHGQKGVCSQLWPDVDMPFSA TGMRPDLIINPHAFPSRMTIAMLLESIAAKG
Sbjct: 682  IGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG 741

Query: 2309 GSLHGKFVDATPFSSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTE 2488
            G+LHGKFVDATPFS+++K+     E ES  L+++LGSML   GFNH+GTEVLYSG+YGTE
Sbjct: 742  GALHGKFVDATPFSNTMKE----SESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTE 797

Query: 2489 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQP 2602
            LTC IFIGPVYYQRLRHMVSDKFQVRSTG VD +TRQP
Sbjct: 798  LTCRIFIGPVYYQRLRHMVSDKFQVRSTGQVDHITRQP 835


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1
            [Solanum lycopersicum]
          Length = 1184

 Score = 1191 bits (3082), Expect = 0.0
 Identities = 590/865 (68%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 201  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 260

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++ ++  G VGTQ++GERAKIIL EV+ L LFTR QCL +IGE+F+P + G
Sbjct: 261  YVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIG 320

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M+NDSY  VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 321  MQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 380

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL K +R LQ+E +  KK F+  SLTDVKKA++KN  KQ+G  
Sbjct: 381  LLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLT 440

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E+MLKTGRL TQS LDL+++AGMTV AE+LNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 441  IESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 500

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+++DF K++ SILNVL+  GM
Sbjct: 501  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGM 560

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P+ PKLV+AGPPE+L VLL+GR+ G IP+D +EKAV+HLR+LKLS+TS+IP DLEVGY+
Sbjct: 561  TPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 620

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 621  PLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGR 680

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 681  KTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 740

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 741  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCH 800

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++ +KS    ++FRRSNLD+ SH  IDSDGLPYVGQR+ P EPY S Y
Sbjct: 801  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIY 860

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS     +LKGSE V VDYVAVDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 861  NEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRFRRSRNPVIGDKFSSRHGQKG 920

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFSA TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 921  VCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 980

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+++K+     E ES  L+++LGSML   GFNH+GTEVLYSG+YGTELTC IFIGPVYYQ
Sbjct: 981  SNTMKE----SESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQ 1036

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTG VD +TRQP
Sbjct: 1037 RLRHMVSDKFQVRSTGQVDHITRQP 1061


>ref|XP_006366498.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Solanum
            tuberosum]
          Length = 1179

 Score = 1190 bits (3078), Expect = 0.0
 Identities = 589/865 (68%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 196  YSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 255

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++ ++  G VGTQ++GERAKIIL EV+ L LFTR QCL +IGE+F+P + G
Sbjct: 256  YVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIG 315

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M+NDSY  VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 316  MQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 375

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL K +R LQ+E +  KK F+  SLTDVKKA++KN  KQ+G A
Sbjct: 376  LLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLA 435

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E+MLKTGRL TQS LDL+++AGMTV AE+LNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 436  IESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 495

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+++DF K++ SILNVL+  GM
Sbjct: 496  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGM 555

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             P  PKLV+ GPPE+L VLL+GR+ G IP+D +EKAV+HLR+LKLS+TS+IP DLEVGY+
Sbjct: 556  TPPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYI 615

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++EL+GPFEQVYMEI CPDGG+GGR
Sbjct: 616  PLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGGDGGR 675

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 676  KTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 735

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 736  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCH 795

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++ +KS    ++FRRSNLD+ SH  ID+DGLPYVGQR+ P EPY S Y
Sbjct: 796  GHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSIY 855

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   S +LKGSE V VDYVAVDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 856  NEITSQTTSMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 915

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFSA TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 916  VCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 975

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+++K+     E ES  L+++LGSML   GFNH+GTEVLYSG+YGTELTC IFIGPVYYQ
Sbjct: 976  SNTMKE----SESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGPVYYQ 1031

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTG VD +TRQP
Sbjct: 1032 RLRHMVSDKFQVRSTGQVDHITRQP 1056


>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Vitis
            vinifera]
 ref|XP_010659084.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X2 [Vitis
            vinifera]
          Length = 1169

 Score = 1189 bits (3076), Expect = 0.0
 Identities = 598/865 (69%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ +T  +Y L     R  F       L+ V     ALIDTT HEI
Sbjct: 183  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 242

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + SLT  Y++KYE   G VGTQ++GER KIIL EV+DL LFTR QCL++IGE+F+  M G
Sbjct: 243  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 302

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            +EN+SYS VA+AVLRE++ VHL+NN+DKFNL IFMVQKLFS IDQTS+PDNPD LQ QEV
Sbjct: 303  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 362

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQEWL KA+RLLQDE   RK NF+F SL  VKK +DKNPS+Q+  A
Sbjct: 363  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKVMDKNPSRQISLA 421

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 422  VENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 481

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPE+WGF+CPVHTPDG PCGLLNHM ++CR+TSY+DS G+ RDF KI+ SIL+VL+G GM
Sbjct: 482  LPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGM 541

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             PALPKLV+AGPPEVL V+L+GRVVG IP+  VE AV+HLR+LK+SA S IP+DLEVGY+
Sbjct: 542  TPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYI 601

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE ++IELIGPFEQVYMEI CPDG +GGR
Sbjct: 602  PLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGR 661

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATHEEIHPTG+LSVV +LTPWSDHNQSPRNMYQCQM KQTM FSS          
Sbjct: 662  RNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQK 721

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                       GTNAIVAVLAYSGYDMEDAM+LNKSSVDRG  H
Sbjct: 722  LYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCH 781

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            G IYQTETIDL+DE +KS  G ++FRRSN+D+ +++ IDSDGLPYVGQ + P EPY S Y
Sbjct: 782  GQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIY 841

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEVTS+  + +LKGSE V VDYVA+D KNKK  QK NIR RR RNPIIGDKFSSRHGQKG
Sbjct: 842  NEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 901

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTIAMLLES+AAKGGSLHGKFVDATPF
Sbjct: 902  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 961

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S S++K +     ES  L++ELGSMLTS GFN++G EVLYSG YGTELTCEIFIGPVYYQ
Sbjct: 962  SDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQ 1021

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1022 RLRHMVSDKFQVRSTGTVDQVTRQP 1046


>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 isoform X1 [Vitis
            vinifera]
          Length = 1178

 Score = 1189 bits (3076), Expect = 0.0
 Identities = 598/865 (69%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ +T  +Y L     R  F       L+ V     ALIDTT HEI
Sbjct: 192  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 251

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + SLT  Y++KYE   G VGTQ++GER KIIL EV+DL LFTR QCL++IGE+F+  M G
Sbjct: 252  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 311

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            +EN+SYS VA+AVLRE++ VHL+NN+DKFNL IFMVQKLFS IDQTS+PDNPD LQ QEV
Sbjct: 312  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 371

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQEWL KA+RLLQDE   RK NF+F SL  VKK +DKNPS+Q+  A
Sbjct: 372  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKVMDKNPSRQISLA 430

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 431  VENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 490

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPE+WGF+CPVHTPDG PCGLLNHM ++CR+TSY+DS G+ RDF KI+ SIL+VL+G GM
Sbjct: 491  LPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGM 550

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             PALPKLV+AGPPEVL V+L+GRVVG IP+  VE AV+HLR+LK+SA S IP+DLEVGY+
Sbjct: 551  TPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYI 610

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE ++IELIGPFEQVYMEI CPDG +GGR
Sbjct: 611  PLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGR 670

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATHEEIHPTG+LSVV +LTPWSDHNQSPRNMYQCQM KQTM FSS          
Sbjct: 671  RNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQK 730

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                       GTNAIVAVLAYSGYDMEDAM+LNKSSVDRG  H
Sbjct: 731  LYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCH 790

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            G IYQTETIDL+DE +KS  G ++FRRSN+D+ +++ IDSDGLPYVGQ + P EPY S Y
Sbjct: 791  GQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIY 850

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEVTS+  + +LKGSE V VDYVA+D KNKK  QK NIR RR RNPIIGDKFSSRHGQKG
Sbjct: 851  NEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 910

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTIAMLLES+AAKGGSLHGKFVDATPF
Sbjct: 911  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 970

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S S++K +     ES  L++ELGSMLTS GFN++G EVLYSG YGTELTCEIFIGPVYYQ
Sbjct: 971  SDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQ 1030

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1031 RLRHMVSDKFQVRSTGTVDQVTRQP 1055


>emb|CBI35100.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1113

 Score = 1189 bits (3076), Expect = 0.0
 Identities = 598/865 (69%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ +T  +Y L     R  F       L+ V     ALIDTT HEI
Sbjct: 149  YTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEI 208

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + SLT  Y++KYE   G VGTQ++GER KIIL EV+DL LFTR QCL++IGE+F+  M G
Sbjct: 209  YESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDG 268

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            +EN+SYS VA+AVLRE++ VHL+NN+DKFNL IFMVQKLFS IDQTS+PDNPD LQ QEV
Sbjct: 269  LENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEV 328

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQEWL KA+RLLQDE   RK NF+F SL  VKK +DKNPS+Q+  A
Sbjct: 329  LLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKVMDKNPSRQISLA 387

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            VE MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 388  VENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 447

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPE+WGF+CPVHTPDG PCGLLNHM ++CR+TSY+DS G+ RDF KI+ SIL+VL+G GM
Sbjct: 448  LPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGM 507

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
             PALPKLV+AGPPEVL V+L+GRVVG IP+  VE AV+HLR+LK+SA S IP+DLEVGY+
Sbjct: 508  TPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYI 567

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE ++IELIGPFEQVYMEI CPDG +GGR
Sbjct: 568  PLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGR 627

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATHEEIHPTG+LSVV +LTPWSDHNQSPRNMYQCQM KQTM FSS          
Sbjct: 628  RNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQK 687

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                       GTNAIVAVLAYSGYDMEDAM+LNKSSVDRG  H
Sbjct: 688  LYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCH 747

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            G IYQTETIDL+DE +KS  G ++FRRSN+D+ +++ IDSDGLPYVGQ + P EPY S Y
Sbjct: 748  GQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIY 807

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NEVTS+  + +LKGSE V VDYVA+D KNKK  QK NIR RR RNPIIGDKFSSRHGQKG
Sbjct: 808  NEVTSSTRATKLKGSEPVIVDYVALDAKNKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKG 867

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTIAMLLES+AAKGGSLHGKFVDATPF
Sbjct: 868  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 927

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S S++K +     ES  L++ELGSMLTS GFN++G EVLYSG YGTELTCEIFIGPVYYQ
Sbjct: 928  SDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQ 987

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 988  RLRHMVSDKFQVRSTGTVDQVTRQP 1012


>ref|XP_009795429.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Nicotiana
            sylvestris]
          Length = 1185

 Score = 1181 bits (3054), Expect = 0.0
 Identities = 590/865 (68%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 199  YSDKAVVIRCVREDQSAVSVKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 258

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++Y++  G VGTQ++GERAKIIL EV+ L LFTR QCL++IGE+F+P M G
Sbjct: 259  YVNLTCCYNEEYDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLQHIGEHFQPVMTG 318

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M+N SY+ VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 319  MQNCSYNTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 378

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL + +RLLQ+E +  KK F+  SL DVKK ++KN  KQ+  A
Sbjct: 379  LLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLADVKKTIEKNAPKQMSLA 438

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 439  IENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 498

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+I+DF KI++SIL VL   GM
Sbjct: 499  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNIKDFFKIRESILRVLTTIGM 558

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
            IP+ PKLVK GPPE L VLL+GR+VG + +D++E+AV++LR+LK+SA S IP DLEVGY+
Sbjct: 559  IPSAPKLVKGGPPEELSVLLDGRIVGSMRSDKIEEAVTYLRRLKVSAIS-IPVDLEVGYI 617

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 618  PLSMSGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGR 677

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 678  KNVFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 737

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 738  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGLCH 797

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++ +KS    +VFRRS LD+ SH  IDSDGLPYVGQR+ P EPY + Y
Sbjct: 798  GHIYQTETIDLTEQSAKSDRAQRVFRRSYLDKSSHQLIDSDGLPYVGQRINPHEPYCTIY 857

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   + +LKGSE V VDYVAVDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 858  NEITSQTTNMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 917

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 918  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 977

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+++K      E ES  L++ELGSMLT+ GFN++G EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 978  SNTMKD----AESESSSLVDELGSMLTASGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1033

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1034 RLRHMVSDKFQVRSTGTVDQVTRQP 1058


>ref|XP_019245498.1| PREDICTED: DNA-directed RNA polymerase I subunit 2 [Nicotiana
            attenuata]
          Length = 1185

 Score = 1180 bits (3053), Expect = 0.0
 Identities = 590/865 (68%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 199  YSDKAVVIRCVREDQSAVSVKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 258

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++Y++  G VGTQ++GERAKIIL EV+ L LFTR QCL++IGE+F+P M G
Sbjct: 259  YVNLTCCYNEEYDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLQHIGEHFQPVMTG 318

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M++ SY+ VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 319  MQSYSYNTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 378

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL + +RLLQ+E +  KK F+  SL DVKK ++KN  KQ+  A
Sbjct: 379  LLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLADVKKTIEKNAPKQMSLA 438

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 439  IENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 498

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+I+DF KI++SIL VL   GM
Sbjct: 499  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNIKDFFKIRESILRVLTTIGM 558

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
            +P+ PKLVK GPPE L VLL+GR+VG + +D++E+AV++LR+LK+SA S IP DLEVGY+
Sbjct: 559  VPSAPKLVKGGPPEELSVLLDGRIVGSMRSDKIEEAVTYLRRLKVSAIS-IPVDLEVGYI 617

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 618  PLSMSGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDVELIGPFEQVYMEISCPDGGDGGR 677

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 678  KNVFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 737

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 738  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGLCH 797

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++ +KS    +VFRRS LD+ SH  IDSDGLPYVGQR+ P EPY + Y
Sbjct: 798  GHIYQTETIDLTEQSAKSDRAQRVFRRSYLDKSSHQLIDSDGLPYVGQRINPHEPYCTIY 857

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   + +LKGSE V VDYVAVDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 858  NEITSQTTNMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 917

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 918  VCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 977

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+S+K      E ES  L++ELGSMLT+ GFN++G EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 978  SNSMKD----AESESSSLVDELGSMLTASGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1033

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1034 RLRHMVSDKFQVRSTGTVDQVTRQP 1058


>gb|OIT03208.1| dna-directed rna polymerase i subunit 2 [Nicotiana attenuata]
          Length = 1221

 Score = 1180 bits (3053), Expect = 0.0
 Identities = 590/865 (68%), Positives = 690/865 (79%), Gaps = 23/865 (2%)
 Frame = +2

Query: 77   FQQKRSEVKVGSDRRTELTTYVYQLILSKLRFFFLYDLFNSLVIVSFFQHALIDTTGHEI 256
            +  K   ++   + ++ ++  +Y L     R  F       L+ V     AL+DTT HEI
Sbjct: 235  YSDKAVVIRCVREDQSAVSVKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEI 294

Query: 257  FTSLTSVYNDKYEKAVGCVGTQILGERAKIILSEVKDLKLFTRIQCLEYIGEYFKPFMFG 436
            + +LT  YN++Y++  G VGTQ++GERAKIIL EV+ L LFTR QCL++IGE+F+P M G
Sbjct: 295  YVNLTCCYNEEYDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLQHIGEHFQPVMTG 354

Query: 437  MENDSYSAVAEAVLREFVLVHLNNNHDKFNLFIFMVQKLFSFIDQTSIPDNPDSLQTQEV 616
            M++ SY+ VA+AVLR+++ VHL+NNHDKFNL IFM+QKLFS IDQTS+ DNPDSLQ QEV
Sbjct: 355  MQSYSYNTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEV 414

Query: 617  LLPGHLVTIYVKEKLQEWLQKAKRLLQDEAETRKKNFDFGSLTDVKKALDKNPSKQVGQA 796
            LLPGHL+TIY+KEKLQ+WL + +RLLQ+E +  KK F+  SL DVKK ++KN  KQ+  A
Sbjct: 415  LLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSLADVKKTIEKNAPKQMSLA 474

Query: 797  VETMLKTGRLVTQSTLDLKEKAGMTVMAERLNFLRFLSHFRAVHRGSSLADLRTTSVRKL 976
            +E MLKTGRLVTQS LDL+++AGMTV AERLNFLRFLSHFRAVHRG+S A LRTTSVRKL
Sbjct: 475  IENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKL 534

Query: 977  LPESWGFVCPVHTPDGSPCGLLNHMTASCRVTSYYDSEGHIRDFSKIQKSILNVLVGAGM 1156
            LPESWGF+CPVHTPDG PCGLLNHMTASCR+TSYYDS+G+I+DF KI++SIL VL   GM
Sbjct: 535  LPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNIKDFFKIRESILRVLTTIGM 594

Query: 1157 IPALPKLVKAGPPEVLHVLLEGRVVGVIPNDRVEKAVSHLRKLKLSATSAIPEDLEVGYV 1336
            +P+ PKLVK GPPE L VLL+GR+VG + +D++E+AV++LR+LK+SA S IP DLEVGY+
Sbjct: 595  VPSAPKLVKGGPPEELSVLLDGRIVGSMRSDKIEEAVTYLRRLKVSAIS-IPVDLEVGYI 653

Query: 1337 PISMMGAFPGLFLFTSPARFVRPVKQKFPPPEEKNNIELIGPFEQVYMEIECPDGGNGGR 1516
            P+SM GA+PGL+LFTSP+RFVRPV+    P EE N++ELIGPFEQVYMEI CPDGG+GGR
Sbjct: 654  PLSMSGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDVELIGPFEQVYMEISCPDGGDGGR 713

Query: 1517 LSEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSS---------- 1666
             + FPATH EIHPT ILSVVGNLTPWSDHNQSPRNMYQCQM KQTMGFSS          
Sbjct: 714  KNVFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQK 773

Query: 1667 -----------XXXXXXXXXXXXXXXLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGFAH 1813
                                      LGTNAIVAVLAYSGYDMEDAMVLNKSSVDRG  H
Sbjct: 774  LYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGLCH 833

Query: 1814 GHIYQTETIDLADEKSKS--GNQVFRRSNLDRKSHAFIDSDGLPYVGQRVKPGEPYYSKY 1987
            GHIYQTETIDL ++ +KS    +VFRRS LD+ SH  IDSDGLPYVGQR+ P EPY + Y
Sbjct: 834  GHIYQTETIDLTEQSAKSDRAQRVFRRSYLDKSSHQLIDSDGLPYVGQRINPHEPYCTIY 893

Query: 1988 NEVTSNAFSNRLKGSEAVTVDYVAVDVKNKKQLQKANIRLRRGRNPIIGDKFSSRHGQKG 2167
            NE+TS   + +LKGSE V VDYVAVDVKNK  LQKANIR RR RNP+IGDKFSSRHGQKG
Sbjct: 894  NEITSQTTNMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRSRNPVIGDKFSSRHGQKG 953

Query: 2168 VCSQLWPDVDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 2347
            VCSQLWPDVDMPFS  TGMRPDLIINPHAFPSRMTIAMLLESIAAKGG+LHGKFVDATPF
Sbjct: 954  VCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPF 1013

Query: 2348 SSSVKKPDDIPEDESDPLINELGSMLTSRGFNHYGTEVLYSGIYGTELTCEIFIGPVYYQ 2527
            S+S+K      E ES  L++ELGSMLT+ GFN++G EVLYSG+YGTELTCEIFIGPVYYQ
Sbjct: 1014 SNSMKD----AESESSSLVDELGSMLTASGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1069

Query: 2528 RLRHMVSDKFQVRSTGTVDQVTRQP 2602
            RLRHMVSDKFQVRSTGTVDQVTRQP
Sbjct: 1070 RLRHMVSDKFQVRSTGTVDQVTRQP 1094