BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00012776
         (2944 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sati...  1675   0.0  
ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Heliant...  1638   0.0  
gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...  1585   0.0  
ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indi...  1383   0.0  
ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europae...  1381   0.0  
gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...  1381   0.0  
ref|XP_021276585.1| RNA-dependent RNA polymerase 6 [Herrania umb...  1373   0.0  
gb|APR63701.1| SILENCING DEFECTIVE family protein 1 [Populus tom...  1365   0.0  
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...  1365   0.0  
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1363   0.0  
ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...  1363   0.0  
ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Z...  1360   0.0  
ref|XP_022731356.1| RNA-dependent RNA polymerase 6-like [Durio z...  1357   0.0  
ref|XP_017983705.1| PREDICTED: RNA-dependent RNA polymerase 6 [T...  1357   0.0  
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]      1357   0.0  
ref|XP_021597106.1| RNA-dependent RNA polymerase 6 [Manihot escu...  1355   0.0  
ref|XP_021670990.1| RNA-dependent RNA polymerase 6-like [Hevea b...  1353   0.0  
ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [J...  1352   0.0  
ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [N...  1351   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]    1351   0.0  

>ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sativa]
 gb|PLY85763.1| hypothetical protein LSAT_1X44761 [Lactuca sativa]
          Length = 1199

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 808/984 (82%), Positives = 891/984 (90%), Gaps = 4/984 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M+S+R+DK+++VTQVS+GG DN +TAK LLDY+EAK G +WRCRLKKSSTPPDTYPEF+A
Sbjct: 1    MESERSDKELVVTQVSIGGFDNNITAKRLLDYIEAKAGQVWRCRLKKSSTPPDTYPEFDA 60

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            DL+ IQK++DY+KVEPHAFVH+VD DSV +  EA  + ELVL+N  LKVN+GPEN YRMN
Sbjct: 61   DLENIQKLNDYEKVEPHAFVHFVDPDSVNSIKEAEGKCELVLDNNYLKVNLGPENPYRMN 120

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            Q RR +TPF+LSNV LE+GLL++RD F VGWRG  SG+DFLIDPFD SCKFLFTK+TAFS
Sbjct: 121  QRRRTKTPFKLSNVVLEIGLLASRDKFLVGWRGPSSGLDFLIDPFDCSCKFLFTKDTAFS 180

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLN----LVFQLGTPPVIFYRTADDDIHI 712
            FKGT+++AVIKCNYKVEFL RDVN IKEY ++      LVFQL + P+I YRTADDDI I
Sbjct: 181  FKGTKDHAVIKCNYKVEFLARDVNDIKEYMDYSQASQVLVFQLASAPLISYRTADDDIAI 240

Query: 713  THPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHP 892
            THPSE LDDDDPWIRTTDFTP GAIGRCNTYR+ IRIRDVPK KKAL FLKEQRV I+HP
Sbjct: 241  THPSEMLDDDDPWIRTTDFTPGGAIGRCNTYRILIRIRDVPKVKKALEFLKEQRVHIDHP 300

Query: 893  KTKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLR 1072
               L+VE EP FG  ++D  F I Y+ DI FK+LFLVN+V+++CIINQHQFTEKVFDLLR
Sbjct: 301  TRNLKVENEPDFGSPLRDPFFCIQYKMDIPFKVLFLVNAVLNKCIINQHQFTEKVFDLLR 360

Query: 1073 SQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVIT 1252
               EEV VAALKHICSYR P+YDGFTR++IVQ+WL+NNPKLI++   Q D IEVRRL+IT
Sbjct: 361  DAKEEVTVAALKHICSYRRPVYDGFTRVKIVQEWLMNNPKLIDEEGGQKDIIEVRRLIIT 420

Query: 1253 PSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSS 1432
            PSKAYCLPPEVELSNRVLRHYR+VSDRFLRVTFMDEGM+ LNN+VLNFYPAPIVKDITSS
Sbjct: 421  PSKAYCLPPEVELSNRVLRHYRDVSDRFLRVTFMDEGMRTLNNHVLNFYPAPIVKDITSS 480

Query: 1433 HIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWM 1612
             IAQKTTMFRRVKNILSQGFYL GRKY FLAFSANQLRDRSAWFFAE  K+TCK I+SWM
Sbjct: 481  FIAQKTTMFRRVKNILSQGFYLCGRKYSFLAFSANQLRDRSAWFFAEKDKLTCKDIISWM 540

Query: 1613 GKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELAL 1792
            GKF+N+N+AKCAARMGQCFSSTYATVEVPRHEVDLEL+DIKRN YTFSDG+GK+SPELAL
Sbjct: 541  GKFNNKNVAKCAARMGQCFSSTYATVEVPRHEVDLELEDIKRNGYTFSDGVGKISPELAL 600

Query: 1793 EVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICS 1972
            EVAEKLQL DNQPCAYQIRYAGCKGVVVWWPDKKGD+IKLSLRPSMNKFES+HT+LEICS
Sbjct: 601  EVAEKLQLKDNQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESDHTVLEICS 660

Query: 1973 WTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESG 2152
            WTRLQPGFLNRQIITLLSAL V+DDIFW+MQMKMV  LN ML DTDVAFDV+TASCAESG
Sbjct: 661  WTRLQPGFLNRQIITLLSALNVEDDIFWNMQMKMVKKLNLMLTDTDVAFDVLTASCAESG 720

Query: 2153 NTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQ 2332
            NTASIML AGFKPQ+EPHLRGMLSSIRVAQLEDLREKSRIFVQ+GRWLMGC DEL VLEQ
Sbjct: 721  NTASIMLGAGFKPQSEPHLRGMLSSIRVAQLEDLREKSRIFVQDGRWLMGCLDELGVLEQ 780

Query: 2333 GQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPG 2512
            GQCFIQVSNPS+ENCFAKHGSRF +T RNL VIEG VVIAKNPCLHPGDVRVLKAVNVPG
Sbjct: 781  GQCFIQVSNPSVENCFAKHGSRFCDTDRNLKVIEGNVVIAKNPCLHPGDVRVLKAVNVPG 840

Query: 2513 LEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKE 2692
            LEHL DCL+FPQKGDRPHTDEASGSDLDGDLYFVTWDE LIPPSK SWPPMEYTAAEAK+
Sbjct: 841  LEHLFDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEMLIPPSKTSWPPMEYTAAEAKQ 900

Query: 2693 LPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFP 2872
            LPRDV+H+DII+FFTKNMVNDSLGTICNAHVVH+DMS+YGALDEKC KLAELAATAVDFP
Sbjct: 901  LPRDVKHSDIIEFFTKNMVNDSLGTICNAHVVHADMSDYGALDEKCVKLAELAATAVDFP 960

Query: 2873 KTGKIVNMPHSLRPKLYPDFMGKE 2944
            KTGKIV+MP  LRPKLYPD+MGKE
Sbjct: 961  KTGKIVSMPPQLRPKLYPDYMGKE 984


>ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Helianthus annuus]
 gb|OTG32623.1| putative RNA-dependent RNA polymerase 6 [Helianthus annuus]
          Length = 1201

 Score = 1638 bits (4241), Expect = 0.0
 Identities = 796/984 (80%), Positives = 888/984 (90%), Gaps = 4/984 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M S+ ND++++V+QVS+GG  NEVTAKMLLDYLE+  G I+RCRLKKSSTPP+TYPEF A
Sbjct: 1    MGSEGNDRELVVSQVSIGGFGNEVTAKMLLDYLESTHGQIYRCRLKKSSTPPETYPEFNA 60

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            DLD+I+ V DY+KVEPHAFVH+VD +SV + LEAA R ELVL+   LKV++GPEN YRMN
Sbjct: 61   DLDQIKIVTDYEKVEPHAFVHFVDPNSVTSVLEAAGRKELVLDKHVLKVSLGPENPYRMN 120

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            Q RRK+T F+LSNV LE+GL+++RD+F VGWRG DSGVDFLIDPFDRSCKFL TK+TAF 
Sbjct: 121  QRRRKKTSFKLSNVVLEIGLMTSRDDFVVGWRGPDSGVDFLIDPFDRSCKFLLTKDTAFC 180

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNH----LNLVFQLGTPPVIFYRTADDDIHI 712
            FKGT+++AVI+CNYKVEFLVRDVN IKEY ++    L LVFQL + P+I YRTADDDI  
Sbjct: 181  FKGTKDHAVIRCNYKVEFLVRDVNDIKEYTDYSESCLVLVFQLASSPLISYRTADDDIIN 240

Query: 713  THPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHP 892
            T+P E LDDDDPWIRTTDFTPSGAIGRCNTYRV IRIRD  K KKAL FLKEQRV +EH 
Sbjct: 241  TYPFEMLDDDDPWIRTTDFTPSGAIGRCNTYRVMIRIRDGSKVKKALEFLKEQRVHVEHR 300

Query: 893  KTKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLR 1072
            KTKL+ E EP FG  + D  FSIHY+ DISFK++FLVNSV+HRCIINQHQFTE VFDLLR
Sbjct: 301  KTKLKAENEPEFGFPIPDPFFSIHYKPDISFKVMFLVNSVLHRCIINQHQFTENVFDLLR 360

Query: 1073 SQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVIT 1252
             Q EEVNVAALKHIC+YRHPLYDGF RL+ VQ+WLLN PK IEKPLEQND IEV RL+IT
Sbjct: 361  DQSEEVNVAALKHICAYRHPLYDGFKRLKTVQEWLLNTPKRIEKPLEQNDVIEVGRLIIT 420

Query: 1253 PSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSS 1432
            P+KAY LPPEVELSNRVLRHYR+VSDRFLRVTFMDEGM+ LNNNVLNFYPAPIVKD+TS+
Sbjct: 421  PTKAYALPPEVELSNRVLRHYRQVSDRFLRVTFMDEGMRTLNNNVLNFYPAPIVKDVTST 480

Query: 1433 HIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWM 1612
             +AQKTTMFRRVK+ILS GF+LSGR+Y FLAFSANQLRDRSAWFFAE+GK++CK I++WM
Sbjct: 481  FMAQKTTMFRRVKDILSNGFHLSGRQYCFLAFSANQLRDRSAWFFAENGKISCKNIIAWM 540

Query: 1613 GKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELAL 1792
            G+F+N+NIAKCAARMGQCFSSTYATV+VPRHEV+++L+DIKRNNYTFSDGIG++SPELAL
Sbjct: 541  GRFNNKNIAKCAARMGQCFSSTYATVDVPRHEVNMKLEDIKRNNYTFSDGIGRISPELAL 600

Query: 1793 EVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICS 1972
            EVAEKLQLTDNQPCAYQIRYAGCKGVV  WP+K+G++ KLSLR SMNKFES+HT+LEICS
Sbjct: 601  EVAEKLQLTDNQPCAYQIRYAGCKGVVACWPNKEGENFKLSLRRSMNKFESDHTVLEICS 660

Query: 1973 WTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESG 2152
            WTRLQPGFLNRQIITLLSAL+VKD+IFWDMQMKMV  LN ML +T+VAFDVITASCAESG
Sbjct: 661  WTRLQPGFLNRQIITLLSALDVKDEIFWDMQMKMVEKLNLMLENTEVAFDVITASCAESG 720

Query: 2153 NTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQ 2332
            NTASIML +GF P+TEPHLRGMLSSIRVAQLEDLREKSRIFV +GRWLMGCFDEL VLEQ
Sbjct: 721  NTASIMLGSGFDPKTEPHLRGMLSSIRVAQLEDLREKSRIFVNDGRWLMGCFDELGVLEQ 780

Query: 2333 GQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPG 2512
            GQCFIQVSNPS+ENCFAKHGSRF ET  NLTVIEG V+IAKNPCLHPGDVRVLKAVNVPG
Sbjct: 781  GQCFIQVSNPSVENCFAKHGSRFSETTSNLTVIEGTVIIAKNPCLHPGDVRVLKAVNVPG 840

Query: 2513 LEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKE 2692
            LEHL DCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDE+LIPPSKRSWPPMEYTAAEAKE
Sbjct: 841  LEHLFDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKRSWPPMEYTAAEAKE 900

Query: 2693 LPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFP 2872
            L RDVR  DI+DFFTKNMVNDSLGTICNAHVVH+D+S+ GALDEKC KLAELAATAVDFP
Sbjct: 901  LTRDVRTADIVDFFTKNMVNDSLGTICNAHVVHADLSDDGALDEKCLKLAELAATAVDFP 960

Query: 2873 KTGKIVNMPHSLRPKLYPDFMGKE 2944
            KTGKIVNMP  L+PK YPDFMGKE
Sbjct: 961  KTGKIVNMPAQLKPKQYPDFMGKE 984


>gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1182

 Score = 1585 bits (4105), Expect = 0.0
 Identities = 779/981 (79%), Positives = 865/981 (88%), Gaps = 1/981 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M+++R+DK M +TQVSVGG  + V AKMLLDYLE   G +WRCR+K SSTPP+TYPEF+A
Sbjct: 1    MEAERSDKDMEITQVSVGGFGDHVKAKMLLDYLEEIVGQVWRCRVKASSTPPNTYPEFDA 60

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            DL+ IQKVDDY KVEPHAFVH+VD DSV + LE   +GELV  N   KV++GPEN YR+ 
Sbjct: 61   DLENIQKVDDYKKVEPHAFVHFVDPDSVNSVLEIEGKGELVFLNNPSKVSLGPENPYRI- 119

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
                     +LSNV LE+G+ ++RDNF VGWRG DSG+DFLIDPFD SCKFLFTK+TAFS
Sbjct: 120  ---------KLSNVVLEIGMFASRDNFLVGWRGPDSGLDFLIDPFDYSCKFLFTKDTAFS 170

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKE-YDNHLNLVFQLGTPPVIFYRTADDDIHITHP 721
            FKGT+N+AVIKCN+KVEFLVR++N IK+   +H+ LVFQL + P+I YRTADDDI ITHP
Sbjct: 171  FKGTKNHAVIKCNFKVEFLVREINDIKDCLQSHMVLVFQLVSAPLISYRTADDDIAITHP 230

Query: 722  SETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPKTK 901
            +E LDDDDPWIRTTDFTPSGAIGRC+TYRV IRIRDVPKAKKAL FL+ Q V I+  +TK
Sbjct: 231  AEMLDDDDPWIRTTDFTPSGAIGRCHTYRVLIRIRDVPKAKKALDFLRGQSVPIDQFRTK 290

Query: 902  LRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRSQP 1081
            L+V+ EP FGI ++D  F I YE DISFK+LFLVN+V+HR IINQHQF+EKVFDLLR Q 
Sbjct: 291  LKVQNEPEFGIPLRDPFFCIQYEDDISFKVLFLVNAVLHRGIINQHQFSEKVFDLLRDQS 350

Query: 1082 EEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITPSK 1261
            EEVNVAALKHICSYRHPLYDGFTRL+IVQ+WLLNNPKLIEK + Q D  EVRRLVITPSK
Sbjct: 351  EEVNVAALKHICSYRHPLYDGFTRLKIVQEWLLNNPKLIEKQIXQKDITEVRRLVITPSK 410

Query: 1262 AYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSHIA 1441
            AYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGM  LNN+VLNFYPA IVK      IA
Sbjct: 411  AYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMXTLNNHVLNFYPALIVK----GSIA 466

Query: 1442 QKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMGKF 1621
            QKTTMFR+VKNILS+GFYL GR+Y FLAFSANQLRDRSAWFFAE+GK++C  I +WMGKF
Sbjct: 467  QKTTMFRKVKNILSEGFYLCGRRYRFLAFSANQLRDRSAWFFAENGKISCTDITAWMGKF 526

Query: 1622 SNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALEVA 1801
            SNRN+AKCAARMGQCFSSTYATV+VPR EVDL L+DIKRN Y FSDGIGKMSPELALEVA
Sbjct: 527  SNRNVAKCAARMGQCFSSTYATVKVPRAEVDLNLEDIKRNGYVFSDGIGKMSPELALEVA 586

Query: 1802 EKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSWTR 1981
            EKLQL DNQPCAYQIRYAGCKGV+VWWP KKGD+IKLSLRPSMNKFES+HT+LEICSWTR
Sbjct: 587  EKLQLKDNQPCAYQIRYAGCKGVIVWWPGKKGDNIKLSLRPSMNKFESDHTVLEICSWTR 646

Query: 1982 LQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGNTA 2161
            LQPGFLNRQIITLLSAL V D+IFW MQ KMV NLNQML DTD+AFDVIT SCAESG+TA
Sbjct: 647  LQPGFLNRQIITLLSALNVGDNIFWKMQTKMVRNLNQMLEDTDMAFDVITTSCAESGSTA 706

Query: 2162 SIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQGQC 2341
            SIMLAAGFKP TEPHL GMLSSIRVAQL+DLREKSRIFV +GR LMGC DEL VLEQGQC
Sbjct: 707  SIMLAAGFKPTTEPHLHGMLSSIRVAQLKDLREKSRIFVPKGRLLMGCLDELGVLEQGQC 766

Query: 2342 FIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGLEH 2521
            +IQVSNPS+ENCF KHGSRF ETKRNLTVI+G VVIAKNPCLHPGDVRVL+AV+VPGLEH
Sbjct: 767  YIQVSNPSVENCFVKHGSRFSETKRNLTVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLEH 826

Query: 2522 LVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKELPR 2701
            L DCLIFPQKGDRPHTDEASGSDLDGDLYFVTWD++LIPPSK+SWPPMEYTAAEAK LPR
Sbjct: 827  LFDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDKNLIPPSKQSWPPMEYTAAEAKLLPR 886

Query: 2702 DVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPKTG 2881
            DV+H+DIIDFFTKNMVND LGTICNA+VVH+DMS+YGAL++ C KLAELAA AVDFPKTG
Sbjct: 887  DVKHSDIIDFFTKNMVNDRLGTICNAYVVHADMSDYGALEKNCIKLAELAAIAVDFPKTG 946

Query: 2882 KIVNMPHSLRPKLYPDFMGKE 2944
            KIVNMP +LRPKLYPDFMGKE
Sbjct: 947  KIVNMPPALRPKLYPDFMGKE 967


>ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
 ref|XP_020550370.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
          Length = 1205

 Score = 1383 bits (3579), Expect = 0.0
 Identities = 665/987 (67%), Positives = 798/987 (80%), Gaps = 7/987 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M S+  D  ++VTQ+SVGG++N VTAKMLLDY E   GL+WRCRLK SSTPP++ P +E 
Sbjct: 5    MGSEIGDNDLVVTQISVGGLENYVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESNPNYEI 64

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            D + +Q+  DY K+EPHAFVH+  + S + AL+AA RGEL+L  K LKV++GP+N YRMN
Sbjct: 65   DAESVQRKTDYVKIEPHAFVHFAVAHSAKAALDAAARGELILGRKPLKVSLGPQNPYRMN 124

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            + RR  TP++LS+V +E+G++ +RD F VGWRG  +GVDFL+DPF+ +CK  FT+ TAFS
Sbjct: 125  ERRRTTTPYKLSDVLIEIGVMRSRDEFLVGWRGPRTGVDFLVDPFNGTCKLHFTRNTAFS 184

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLV--FQLGTPPVIFYRTADDDIHITH 718
            FKG    AVIKCN+K+EFL R++N I +Y +  +L+   QL + P+++YRTADDDI  + 
Sbjct: 185  FKGEARSAVIKCNFKIEFLPREINEINQYRDFSSLIVLLQLASSPLVYYRTADDDIEESV 244

Query: 719  PSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVII--EHP 892
            P + LDDDDPWIRTTDFTPSGAIGRCNTYR+S R R+ P   KAL +L++ RV +  E P
Sbjct: 245  PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISARPRNGPSLFKALEYLRKLRVPVLDESP 304

Query: 893  KTKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLR 1072
               LRV++EP FG+ M D  F + Y++ ISFKI+FLVN+VMH+ IINQHQ +EK FDLLR
Sbjct: 305  GRTLRVQDEPDFGMPMSDPFFCLQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLR 364

Query: 1073 SQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVIT 1252
            SQPEE+N+ ALKH+CSY+ P+YD    L+ VQKWLLNNPKL+E+P E +D +EVRRL+IT
Sbjct: 365  SQPEELNIVALKHMCSYKRPVYDAIKALDFVQKWLLNNPKLLERPREMDDVVEVRRLIIT 424

Query: 1253 PSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSS 1432
            PSKAYCLPPEVELSNRVLR+Y+ ++DRFLRVTFMDE M+ LN NVL +Y +PIV+DITS+
Sbjct: 425  PSKAYCLPPEVELSNRVLRNYKNIADRFLRVTFMDEAMQTLNKNVLMYYASPIVRDITSN 484

Query: 1433 HIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWM 1612
               Q+T MF+RVK+IL  GFYL GRKY FLAFSANQLRDRSAWFFAED       I SWM
Sbjct: 485  SNPQRTNMFKRVKDILVNGFYLCGRKYTFLAFSANQLRDRSAWFFAEDKNTGVANIKSWM 544

Query: 1613 GKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELAL 1792
            GKF+ RN+AKCAARMGQCFSSTYAT+EVP  +V+ +  D++RN Y FSDGIG +S +LA+
Sbjct: 545  GKFTQRNVAKCAARMGQCFSSTYATIEVPLTKVNSQFPDVERNGYVFSDGIGMISADLAI 604

Query: 1793 EVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICS 1972
            EVAEKLQL  N PCAYQIRYAG KGVV  WP  K D ++L LR SM KFES H  LEICS
Sbjct: 605  EVAEKLQLGSNPPCAYQIRYAGYKGVVARWP-AKDDGVRLYLRRSMKKFESNHKTLEICS 663

Query: 1973 WTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESG 2152
            WTR QPGFLNRQI+TLLSALEV+DDIFW MQ  MV  L+ ML D+D AFDV+TASC + G
Sbjct: 664  WTRFQPGFLNRQIVTLLSALEVQDDIFWRMQETMVSRLDWMLEDSDTAFDVLTASCTDQG 723

Query: 2153 NTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREK---SRIFVQEGRWLMGCFDELAV 2323
            NTA++ML+AGF+PQTEPHLRGML+SIR AQL DL E+   +RIFV  GRWLMGC DEL  
Sbjct: 724  NTAALMLSAGFRPQTEPHLRGMLTSIRAAQLGDLSERATIARIFVPLGRWLMGCLDELGK 783

Query: 2324 LEQGQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVN 2503
            LE GQCFIQVSNPSIE+CF KHGS+F ETK+ L V+ G V IAKNPCLHPGDVR+L+AV+
Sbjct: 784  LEHGQCFIQVSNPSIEDCFVKHGSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRILEAVD 843

Query: 2504 VPGLEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAE 2683
            VP L HL DCL+FPQKGDRPHT+EASGSDLDGDLYFVTWDE+LIPPSKRSW PMEY   E
Sbjct: 844  VPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEYAPGE 903

Query: 2684 AKELPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAV 2863
             K+LPR+V+H+DIIDFFTKNMVN+SLG ICNAHVVH+D+SEYGALDEKC KLAELAATAV
Sbjct: 904  VKQLPREVKHSDIIDFFTKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAV 963

Query: 2864 DFPKTGKIVNMPHSLRPKLYPDFMGKE 2944
            DFPKTGKIVNMP  L+PK YPDFMGKE
Sbjct: 964  DFPKTGKIVNMPAELKPKTYPDFMGKE 990


>ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845195.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845196.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
 ref|XP_022845198.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
          Length = 1195

 Score = 1381 bits (3574), Expect = 0.0
 Identities = 663/983 (67%), Positives = 798/983 (81%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M S   +K M++TQ+ VGG ++ VTAKML+DY E   GL+WRCRLK SSTPP++YP +E 
Sbjct: 1    MASKGGEKDMVITQIGVGGFEDFVTAKMLMDYFEDNIGLVWRCRLKTSSTPPESYPSYEV 60

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            D + +Q+  DY+KV+PHAFVH+  S S  +AL+AA R EL+L    LKV++GPEN +RMN
Sbjct: 61   DTESVQRKHDYEKVKPHAFVHFALSSSAMSALDAAGRNELILGKNLLKVSLGPENPHRMN 120

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            + RR   P +LSNV +E+GL+  +D+F VGWRG   GVDFL+DPF+ +CK LFTKET FS
Sbjct: 121  ERRRTIPPIKLSNVCVEIGLMRGQDDFLVGWRGPRDGVDFLVDPFNATCKLLFTKETVFS 180

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLVF--QLGTPPVIFYRTADDDIHITH 718
            FKG     VIKCN+KVEFL R++N IK Y +  +L+   QL + P+++YRTADDDI  + 
Sbjct: 181  FKGESKNTVIKCNFKVEFLPREINEIKRYRDFSSLIILLQLASSPIVYYRTADDDIEESV 240

Query: 719  PSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPKT 898
            P + LDDDDPWIRTTDFTPSGAIGRCN YR+S+R R+ P+  KALA+L+E R+ + +   
Sbjct: 241  PFDLLDDDDPWIRTTDFTPSGAIGRCNIYRISVRPRNGPRFDKALAYLQEHRIPVLNDSP 300

Query: 899  KLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRSQ 1078
            + RV +EP FG+ + D  F I Y++ I+FK+LFLVN++MH+ IINQHQ ++K F LLR +
Sbjct: 301  EPRVRDEPDFGVPLPDPFFCIQYKEGITFKVLFLVNAIMHKGIINQHQMSDKFFHLLRIR 360

Query: 1079 PEEVNVAALKHICSYRHPL-YDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            PE VN+ ALKHI S +H   YD    L  VQKWLL NPKL+E P E +D +EVRRL+ITP
Sbjct: 361  PERVNLVALKHIWSLKHHTWYDACKNLVFVQKWLLKNPKLLEGPQELDDIVEVRRLIITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KAYCLPPEVELSNRVLR+Y+ V+DRFLRVTFMDEGM+KLN NVL +YP+ I++DITS  
Sbjct: 421  AKAYCLPPEVELSNRVLRNYKNVADRFLRVTFMDEGMRKLNKNVLTYYPSGILRDITSDS 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
              Q+T+MF+RVK+ILS GFYL GR+Y FLA+SANQLRD SAWFFAE+  V    I+SWMG
Sbjct: 481  NPQRTSMFKRVKDILSNGFYLCGRRYSFLAYSANQLRDSSAWFFAENETVVVPSIMSWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            +F+NRN+AKCAARMGQCFSSTYATVEVP  EVD EL DI+RN Y FSDGIGK+SP+LA+ 
Sbjct: 541  RFTNRNVAKCAARMGQCFSSTYATVEVPAAEVDPELPDIQRNGYDFSDGIGKISPDLAMR 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VAEKLQLT N PCAYQIRYAGCKGVV  WP  + + I L LRPSM KFES HTILEICSW
Sbjct: 601  VAEKLQLTVNPPCAYQIRYAGCKGVVACWP-AENNGIHLYLRPSMKKFESNHTILEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLSAL+VKDDIFW MQ  MV  L++MLVDTD AFD++TASCAE GN
Sbjct: 660  TRFQPGFLNRQIITLLSALDVKDDIFWKMQEIMVSRLDRMLVDTDTAFDILTASCAEQGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
            TA+IML+AGF+PQ+EPHL GML+SIR AQL DLRE++RIFV  GRWLMGC DEL +L QG
Sbjct: 720  TAAIMLSAGFRPQSEPHLCGMLTSIRAAQLGDLRERARIFVPSGRWLMGCLDELGILRQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSNPS+E+CF KHGS+F ET +NL VI+G V IAKNPCLHPGDVR+L+AV++PGL
Sbjct: 780  QCFIQVSNPSLEDCFVKHGSKFSETNKNLRVIKGLVAIAKNPCLHPGDVRILEAVDIPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
            +HL DCL+FPQ GDRPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW PMEY+  E K L
Sbjct: 840  KHLYDCLVFPQNGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMEYSTGEVKTL 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
            PRDV+H DIIDFF+KNMVN+SLG ICNAHVVH+D+SE GALD KC +LAELAATAVDFPK
Sbjct: 900  PRDVKHKDIIDFFSKNMVNESLGAICNAHVVHADLSESGALDLKCIRLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGKIV MP  L+PKLYPDFMGKE
Sbjct: 960  TGKIVTMPTVLKPKLYPDFMGKE 982


>gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1204

 Score = 1381 bits (3574), Expect = 0.0
 Identities = 665/984 (67%), Positives = 806/984 (81%), Gaps = 4/984 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M S+ +D  +IVTQ+SVGG++  VTAKMLLDY E   GL+WRCRLK SSTPPD+YP +E 
Sbjct: 8    MGSEISDTDLIVTQISVGGLEKFVTAKMLLDYFEDNVGLVWRCRLKTSSTPPDSYPNYEI 67

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            D +R+Q+ ++Y KVEPHAFVH+  + S  +ALEAA RG+L+L  + LKV++GP+N +R+N
Sbjct: 68   DTERVQRKNEYVKVEPHAFVHFAVAGSANSALEAAGRGDLILG-RPLKVSLGPQNPHRLN 126

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            + RR  TP++LS+V +E+G++ + D F VGW G   GVDFL+DPF+ +CK  FTK+TAFS
Sbjct: 127  ERRRTTTPYKLSDVFVEIGVMRSPDEFIVGWSGPRRGVDFLVDPFNGTCKLHFTKDTAFS 186

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLVF--QLGTPPVIFYRTADDDIHITH 718
            FKG    AVI CN+ +EFL R++N IK Y +  +LV   QL + P+++YRTADDDI  + 
Sbjct: 187  FKGEARPAVINCNFMIEFLPREINEIKHYKDFTSLVVIVQLASSPLVYYRTADDDIEESV 246

Query: 719  PSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEH--P 892
            P + LDDDDPWIRTTDFTPSGAIGRCNTYR+S+R R+     KAL +L+ +RV +    P
Sbjct: 247  PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRNGSHLSKALGYLRNRRVTVLDGCP 306

Query: 893  KTKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLR 1072
            + +L+V +EP FG+ M D  F I Y++ ISFKI+FLVN+VMH+ IINQHQ +EK FDLLR
Sbjct: 307  RQQLQVRDEPDFGMPMSDPFFCIQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLR 366

Query: 1073 SQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVIT 1252
            SQPEE+   ALK + S++HP+ D F  L+ +Q+WLLNNPK++E+P E +D +EVRRL+IT
Sbjct: 367  SQPEELTTVALKRMYSFKHPVDDAFKALKNLQQWLLNNPKILERPREMDDIVEVRRLIIT 426

Query: 1253 PSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSS 1432
            P+KAYCLPPEVELSNRVLR+YR ++DRFLRVTFMDE M+ LN NVL ++  PIV+DITS+
Sbjct: 427  PAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMQTLNKNVLTYFVTPIVRDITSN 486

Query: 1433 HIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWM 1612
               Q+TTMF+RVK+IL+ GFYL GRKY FLAFSANQLRDRSAWFFAED  +    I SWM
Sbjct: 487  SGPQRTTMFKRVKDILTNGFYLCGRKYSFLAFSANQLRDRSAWFFAEDKNIGVATIKSWM 546

Query: 1613 GKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELAL 1792
            GKF+NRN+AKCAARMGQCFSSTYATVEVP  EV+ +L DI+RN+Y FSDGIG +S +LA+
Sbjct: 547  GKFTNRNVAKCAARMGQCFSSTYATVEVPSTEVNSKLPDIERNDYVFSDGIGMISADLAM 606

Query: 1793 EVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICS 1972
            EVAEKLQL+   PCAYQIRYAG KGVV  WP  K D  +L LRPSM KFES HTILEICS
Sbjct: 607  EVAEKLQLSTKPPCAYQIRYAGYKGVVAGWP-AKNDGFRLYLRPSMKKFESNHTILEICS 665

Query: 1973 WTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESG 2152
            WTR QPGFLNRQIITLLSAL+V+DDIFW MQ  MV  L+QML DTD+AFDV+TASC + G
Sbjct: 666  WTRFQPGFLNRQIITLLSALDVQDDIFWRMQETMVSRLDQMLEDTDMAFDVLTASCTDQG 725

Query: 2153 NTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQ 2332
            NTA+IML+AGFKPQTEPHLRGML+SIR AQL DLREK+RIFV  GRWLMGC DEL VLE 
Sbjct: 726  NTAAIMLSAGFKPQTEPHLRGMLTSIRAAQLADLREKARIFVPNGRWLMGCLDELGVLES 785

Query: 2333 GQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPG 2512
            GQCFIQVSNPS+E+CF KHGS F E+++ L VI+G V IAKNPCLHPGDVR+L+AV+VPG
Sbjct: 786  GQCFIQVSNPSLEDCFVKHGSHFSESEKRLQVIKGLVAIAKNPCLHPGDVRILEAVDVPG 845

Query: 2513 LEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKE 2692
            L HL DCLIFPQKG+RPHT+EASGSDLDGDLYFVTWDE+L+PPSKRSW PMEY   E K+
Sbjct: 846  LHHLYDCLIFPQKGERPHTNEASGSDLDGDLYFVTWDENLLPPSKRSWTPMEYAPGEIKQ 905

Query: 2693 LPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFP 2872
            LPR+V+H+DII+FF KNMVN+SLG ICNAHVVH+D+SEYGALDEKC KLAELAATAVDFP
Sbjct: 906  LPREVKHSDIIEFFAKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVDFP 965

Query: 2873 KTGKIVNMPHSLRPKLYPDFMGKE 2944
            KTGKIV+MP  L+PK+YPDFMGKE
Sbjct: 966  KTGKIVSMPADLKPKMYPDFMGKE 989


>ref|XP_021276585.1| RNA-dependent RNA polymerase 6 [Herrania umbratica]
          Length = 1197

 Score = 1373 bits (3554), Expect = 0.0
 Identities = 663/983 (67%), Positives = 800/983 (81%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M+S  ++K  +VTQVSVGG    VTAK L++YL+ + G++WRCRLK S TPP++YP FE 
Sbjct: 1    MESKGSEKDTVVTQVSVGGFGRHVTAKDLMEYLDNEVGVVWRCRLKTSWTPPESYPNFEI 60

Query: 185  -DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D   IQ+ DDY KVEPHAFVH+    +V  A++AA R ELV NN+ LKV++GPEN Y +
Sbjct: 61   LDSTVIQRTDDYKKVEPHAFVHFASPLTVTWAVDAAGRTELVFNNQLLKVSLGPENPYYL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            N+ RR  TPF+LS+V L++G + ++D FFVGWRG   GVDFL+DPFD +CKF F+++TAF
Sbjct: 121  NRRRRNTTPFKLSDVCLDIGGMVSQDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLV--FQLGTPPVIFYRTADDDIHIT 715
            SFKGT  YAVIKC++KVEFLVRD+N IK+Y     LV   QL + P ++YRTADD+I  +
Sbjct: 181  SFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPWVWYRTADDEIEES 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P + LDDDD WIRTTDFTPSGAIGRCNTYRV IR R   K KKAL +L+EQRV  ++ +
Sbjct: 241  VPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPPDYVR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              LR+ +EP FG+ M D  + I+Y++ I F+I+FLVN+VMH+ I  QHQ +E  F+LLR 
Sbjct: 301  WPLRIRDEPDFGMSMSDPFYCINYKEGIPFEIMFLVNAVMHKGIFYQHQLSEDFFNLLRD 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            QP EVNVAALKHI SYR P++D + RL+ V  WLL NPKL + P + +D +E+RRLVITP
Sbjct: 361  QPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPKLFKSPKQLDDIVEIRRLVITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KAYCL PEVELSNRVLR Y+EV+DRFLRVTFMDEGM+ +N NVL +Y A IV+D+TS+ 
Sbjct: 421  TKAYCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTSTS 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
             +QKT +F+RV++IL+ GFYL GRKY FLAFSANQLRDRSAWFFAEDGK +  QIL WMG
Sbjct: 481  FSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDRSAWFFAEDGKTSVLQILRWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF+NRNIAKCAARMGQCFSSTYATVEVP  EVD  L DI+RN Y FSDGIGK++P+LA+E
Sbjct: 541  KFTNRNIAKCAARMGQCFSSTYATVEVPSTEVDPCLPDIERNGYLFSDGIGKITPDLAME 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VA+KL+L  N PCAYQIRYAGCKGVV  WP++ GD ++LSLRPSMNKF S HT LEICSW
Sbjct: 601  VAQKLKLDLNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRPSMNKFCSNHTTLEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLS L V DD+FW+MQ  MV  LN++LVD D AF+V+T+SCAE GN
Sbjct: 660  TRFQPGFLNRQIITLLSTLHVPDDVFWEMQNTMVSKLNKILVDADAAFEVLTSSCAEQGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
            TA+IML+AGFKPQ EPHLRG+L+ +R +QL  LREK+RIFV  GRWLMG FDEL VLEQG
Sbjct: 720  TAAIMLSAGFKPQIEPHLRGILTCVRASQLSGLREKARIFVPSGRWLMGVFDELGVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQV+NPS+ENCF KHGSRF ETK+N  VI+G VVIAKNPCLHPGD+R+L+AV+ PGL
Sbjct: 780  QCFIQVANPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SWPPM+Y   E K+L
Sbjct: 840  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGEPKQL 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R+V H DIIDFF KNMVN+ LGTICNAHVVH+D+SEYGALDEKC  LAELAATAVDFPK
Sbjct: 900  QREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TG+IV+MP +L+PKLYPDFMGKE
Sbjct: 960  TGRIVSMPANLKPKLYPDFMGKE 982


>gb|APR63701.1| SILENCING DEFECTIVE family protein 1 [Populus tomentosa]
          Length = 1199

 Score = 1365 bits (3532), Expect = 0.0
 Identities = 655/983 (66%), Positives = 798/983 (81%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFE- 181
            M+++ + K+ +VTQVS+GG D  VTAK LL+YLE + GL+WRCRLK S TPP++YP FE 
Sbjct: 1    METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60

Query: 182  ADLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D+ +I + +DY +VEPHAFVH+    S   A++AA R EL LNNK LK ++GPEN + +
Sbjct: 61   TDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            NQ RRK TPF+LS VG+E+G L +RD FFVGWRG  +GVDFL+DPFD +C+F F++ TAF
Sbjct: 121  NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNH--LNLVFQLGTPPVIFYRTADDDIHIT 715
            SFK T  +AVIKC++KVEFLVRD+N IK+Y     L L+ QL + P ++YRTADDDI ++
Sbjct: 181  SFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVS 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P + LDDDDPWIRTTDFT SGAIGRC++YRVSI  R  PK +KA+ FLKE+RV  E+ +
Sbjct: 241  VPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              +R+ +EP FG+ M D  F IH+++ I+F +LFLVN+VMH+ I NQHQ +   FDLLR+
Sbjct: 301  RPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRN 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            QP EVNVAALKHI  YR P++D + +L++ Q+WLL NPK  +   + +D  E+RRLVITP
Sbjct: 361  QPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KAYCLPPEVELSNRVLR Y++V+DRFLRVTFMDEG++ +N+N LN++ APIV+ ITS  
Sbjct: 421  TKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYS 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
              QKT +F+RV++IL++GFYL GR+Y FLAFS+NQLRDRSAWFFAED  +    I SWMG
Sbjct: 481  FPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF+N+NIAKCAARMGQCFSSTYAT+EVP  EV+ +L DIKRN Y FSDGIG ++P+LA E
Sbjct: 541  KFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLARE 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VAEKL+   + PCAYQIRYAGCKGVV  WP++ GD I+LSLR SMNKF+S HTILEICSW
Sbjct: 601  VAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLSAL V D +FW MQ  MV  LNQMLVD+DVAFDV+TASCAE GN
Sbjct: 660  TRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
             A+IML+AGFKPQ EPHLRGML+ +R AQL  LREK+RIFV  GRWLMGC DEL VLEQG
Sbjct: 720  VAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSN  +ENCF KHGS+F ETK+NL V++G VVIAKNPCLHPGD+R+L+AV+ PGL
Sbjct: 780  QCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSKRSW PM+Y AAEAK+L
Sbjct: 840  HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQL 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R V H DI++FF KNM N++LG ICNAHVV +D+SEYGALDEKC  LAELAATAVDFPK
Sbjct: 900  TRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGKIV+MP  L+PK+YPDFMGKE
Sbjct: 960  TGKIVSMPSDLKPKIYPDFMGKE 982


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
 gb|PNT33711.1| hypothetical protein POPTR_006G253500v3 [Populus trichocarpa]
          Length = 1198

 Score = 1365 bits (3532), Expect = 0.0
 Identities = 655/983 (66%), Positives = 798/983 (81%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFE- 181
            M+++ + K+ +VTQVS+GG D  VTAK LL+YLE + GL+WRCRLK S TPP++YP FE 
Sbjct: 1    METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60

Query: 182  ADLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D+ +I + +DY +VEPHAFVH+    S   A++AA R EL LNNK LK ++GPEN + +
Sbjct: 61   TDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            NQ RRK TPF+LS VG+E+G L +RD FFVGWRG  +GVDFL+DPFD +C+F F++ TAF
Sbjct: 121  NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNH--LNLVFQLGTPPVIFYRTADDDIHIT 715
            SFK T  +AVIKC++KVEFLVRD+N IK+Y     L L+ QL + P ++YRTADDDI ++
Sbjct: 181  SFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVS 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P + LDDDDPWIRTTDFT SGAIGRC++YRVSI  R  PK +KA+ FLKE+RV  E+ +
Sbjct: 241  VPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              +R+ +EP FG+ M D  F IH+++ I+F +LFLVN+VMH+ I NQHQ +   FDLLR+
Sbjct: 301  RPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRN 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            QP EVNVAALKHI  YR P++D + +L++ Q+WLL NPK  +   + +D  E+RRLVITP
Sbjct: 361  QPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KAYCLPPEVELSNRVLR Y++V+DRFLRVTFMDEG++ +N+N LN++ APIV+ ITS  
Sbjct: 421  TKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYS 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
              QKT +F+RV++IL++GFYL GR+Y FLAFS+NQLRDRSAWFFAED  +    I SWMG
Sbjct: 481  FPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF+N+NIAKCAARMGQCFSSTYAT+EVP  EV+ +L DIKRN Y FSDGIG ++P+LA E
Sbjct: 541  KFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLARE 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VAEKL+   + PCAYQIRYAGCKGVV  WP++ GD I+LSLR SMNKF+S HTILEICSW
Sbjct: 601  VAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLSAL V D +FW MQ  MV  LNQMLVD+DVAFDV+TASCAE GN
Sbjct: 660  TRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
             A+IML+AGFKPQ EPHLRGML+ +R AQL  LREK+RIFV  GRWLMGC DEL VLEQG
Sbjct: 720  VAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSN  +ENCF KHGS+F ETK+NL V++G VVIAKNPCLHPGD+R+L+AV+ PGL
Sbjct: 780  QCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSKRSW PM+Y AAEAK+L
Sbjct: 840  HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQL 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R V H DI++FF KNM N++LG ICNAHVV +D+SEYGALDEKC  LAELAATAVDFPK
Sbjct: 900  TRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGKIV+MP  L+PK+YPDFMGKE
Sbjct: 960  TGKIVSMPSDLKPKIYPDFMGKE 982


>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
          Length = 1195

 Score = 1363 bits (3529), Expect = 0.0
 Identities = 658/983 (66%), Positives = 801/983 (81%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFE- 181
            M+++ + K+ +VTQVS+GG D  VTAK LL+YLE + GL+WRCRLK S TPP++YP FE 
Sbjct: 1    METEGSAKETVVTQVSIGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60

Query: 182  ADLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
            ADL +I + +DY +VEPHAFVH+   +S   A++AA R EL LNNK LK ++GPEN + +
Sbjct: 61   ADLTKITRTEDYRRVEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            NQ RRK TPF+LS+V +E+G L +RD FFVGWRG  +GVDFL+DPFD +C+F F++ TAF
Sbjct: 121  NQRRRKTTPFKLSDVDVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNH--LNLVFQLGTPPVIFYRTADDDIHIT 715
            SFK T  +AVIKC++KVEFLVRD+N IK+Y     L L+ QL + P ++YRTADDDI ++
Sbjct: 181  SFKSTAEHAVIKCDFKVEFLVRDINEIKQYKETSCLVLLLQLASAPWVWYRTADDDIEVS 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P + LDDDDPWIRTTDFT SGAIGRC++YRVSI  R  PK +KA+ FLKE+RV  E+ +
Sbjct: 241  VPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              +R+ +EP FG+ M D  F IH+++ I+F +LFLVN+VMH+ I NQHQ +   FDLLR+
Sbjct: 301  RPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRN 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            QP EVNVAALKHI  YR P++D + +L++ Q+WLL NPKL +   + +D  E+RRL+ITP
Sbjct: 361  QPTEVNVAALKHIYPYRRPVFDAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRLIITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KAYCLPPEVELSNRVLR Y++V+DRFLRVTFMDEG++ +N+N LN++ APIV+ ITS  
Sbjct: 421  TKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAITSYS 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
              QKT +F+RV++IL++GFYL GR+Y FLAFS+NQLRDRSAWFFAED  +    I SWMG
Sbjct: 481  FPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF+N+NIAKCAARMGQCFSSTYAT+EVP  EV+ +L DIKRN Y FSDGIG ++P+LA E
Sbjct: 541  KFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLARE 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VAEKL+   + P AYQIRYAGCKGVV  WP++ GD I+LSLR SMNKF+S HTILEICSW
Sbjct: 601  VAEKLKFDFDPPSAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLSAL V D +FW MQ  MV  LNQMLVD+DVAFDV+TASCAE GN
Sbjct: 660  TRFQPGFLNRQIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASCAELGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
             A+IML+AGFKPQ EPHLRGML+ +R AQL  LREK+RIFV  GRWLMGC DELAVLEQG
Sbjct: 720  VAAIMLSAGFKPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELAVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSN  +ENCF KHGS+F ETKRNL V++G VVIAKNPCLHPGD+R+L+AV+ PGL
Sbjct: 780  QCFIQVSNSYLENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAVDDPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSKRSW PM+Y AAEAK+L
Sbjct: 840  HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQL 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R V H DII+FF KNM N++LG ICNAHVV +D+SEYGALDEKC  LAELAATAVDFPK
Sbjct: 900  TRPVNHQDIIEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGKIV+MP  L+PK+YPDFMGKE
Sbjct: 960  TGKIVSMPSDLKPKIYPDFMGKE 982


>ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 1363 bits (3527), Expect = 0.0
 Identities = 667/985 (67%), Positives = 800/985 (81%), Gaps = 5/985 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M+S+ ++K M+VTQ+S+GG D  VTA  L  YLE   G + RCRLK SSTPP++YP+FE 
Sbjct: 1    MESEGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEI 60

Query: 185  -DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D  +I++ +DY KVEPHAFVH+V  ++   AL+AA + EL L+ K LKV++GPE  + +
Sbjct: 61   IDTAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            NQ RR   PF+  +V LE+G+L +RD +F GWRG  SGVDFL+DPFD +CKFLFTK+TAF
Sbjct: 121  NQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDN--HLNLVFQLGTPPVIFYRTADDDIHIT 715
            SFKG   +AVIKCN+KVEFLVR++N +++  +   L L+ QL + P ++YRTADDDI  T
Sbjct: 181  SFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEET 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVII--EH 889
             P + LDDDDPWIRTTDFT SGAIGRCN+YR+SI  R   K KKA+ +L+ +RV +  + 
Sbjct: 241  VPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDS 300

Query: 890  PKTKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLL 1069
            PK +LRV +EP FG+ M D  F I +++ I F+++FLVN+VMH+ IINQHQ ++K FDLL
Sbjct: 301  PKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDLL 360

Query: 1070 RSQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVI 1249
            RSQ +++N+AALKHICSYRHP++D + RL++V KWLL NPKL++ P E +D +EVRRLVI
Sbjct: 361  RSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVI 420

Query: 1250 TPSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITS 1429
            TPSKAYCLPPEVELSNRVLR+Y+EVSDRFLRVTFMDEGM+ +N NVLN+Y APIVK ITS
Sbjct: 421  TPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITS 480

Query: 1430 SHIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSW 1609
            +   QKT +F+RVK IL+ GFYL GRKY FLAFS+NQLRDRSAWFFAED K + + I SW
Sbjct: 481  NSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSW 540

Query: 1610 MGKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELA 1789
            MGKF+NRN+AKCAARMGQCFSSTYATVEVP  EV  EL DIKRN Y FSDGIGK+ P+LA
Sbjct: 541  MGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGIGKIVPDLA 599

Query: 1790 LEVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEIC 1969
            +EVAEKL+L +  P AYQIRYAGCKGVV  WP    D I+LS RPSMNKF S+HTILEIC
Sbjct: 600  MEVAEKLKL-EGTPSAYQIRYAGCKGVVACWP-SDNDGIRLSWRPSMNKFLSDHTILEIC 657

Query: 1970 SWTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAES 2149
            SWTR QPGFLNRQI+TLLSAL V D IFW MQ  M+  LNQML DTDVAFDV+ ASCAE 
Sbjct: 658  SWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQ 717

Query: 2150 GNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLE 2329
            GNTA+IML+AGFKPQTEPHL+GML+ IR AQ   LREK+RIFV  GRWLMGC DEL VLE
Sbjct: 718  GNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDELGVLE 777

Query: 2330 QGQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVP 2509
            QGQCFIQVS+PS+ENCF KHGSRF   ++NL VI+G V IAKNPCLHPGDVR+L+AV+ P
Sbjct: 778  QGQCFIQVSSPSLENCFLKHGSRF-SAQKNLKVIKGIVAIAKNPCLHPGDVRILEAVDAP 836

Query: 2510 GLEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAK 2689
            GLEHLVDCL+FPQKGDRPH++EASGSDLDGDLYFVTW+E LIPPSK+SWPPM+Y +AEAK
Sbjct: 837  GLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDSAEAK 896

Query: 2690 ELPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDF 2869
             L R+V   DIIDFFTKNMVN++LG ICNAHVVH+D SEYGALDE C  LAE AATAVDF
Sbjct: 897  ALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDF 956

Query: 2870 PKTGKIVNMPHSLRPKLYPDFMGKE 2944
            PKTGK+V +P  L+PK+YPDFMGKE
Sbjct: 957  PKTGKLVTLPPYLKPKMYPDFMGKE 981


>ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885880.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885881.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885882.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
 ref|XP_015885883.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
          Length = 1197

 Score = 1360 bits (3520), Expect = 0.0
 Identities = 650/982 (66%), Positives = 806/982 (82%), Gaps = 2/982 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M S  N+K+M+VTQVS+GG D  V AK L D+LE + GL++RCRLK SSTPP++YP++  
Sbjct: 1    MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI 60

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            D   I++ DDY KVEPHAFVH+  ++S +  L+AA R EL+LN++ LKV++GPEN YR+N
Sbjct: 61   DTAAIERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRLN 120

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            Q RR  TP +LS+V +++G L  RD FF+ WRG   GVDFL+DPFD +CKF FT++TAFS
Sbjct: 121  QRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAFS 180

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDN--HLNLVFQLGTPPVIFYRTADDDIHITH 718
            FKG+ N+AVIKC++K+EFLVRD+N  K+Y +  +L L+ QL + P I+YRTADDDI  + 
Sbjct: 181  FKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSYLVLLLQLNSAPRIWYRTADDDIDDSV 240

Query: 719  PSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPKT 898
            P + LDDDDPWIRTTDFTPSGAIGR N+YR+S+  R   K KKA+++L+E+RV  +  + 
Sbjct: 241  PYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDSLRW 300

Query: 899  KLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRSQ 1078
             LR+++EP F + M D  F IHY++DI F+ +FLVN+V+H+ I NQHQ ++  F+LLR+Q
Sbjct: 301  PLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRNQ 360

Query: 1079 PEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITPS 1258
             +EVNVAALKHI SY+ P++D   RL++VQ+WLL +PKL +KP   +D  EVRRLVITP+
Sbjct: 361  MKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITPT 420

Query: 1259 KAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSHI 1438
            +AYCLPPEVELSNRVLR+Y+EV+DRFLRVTFMDEGM+ +N+NVL ++ A IV++ITS+  
Sbjct: 421  RAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNSF 480

Query: 1439 AQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMGK 1618
             QKT +F+R+K+IL+ GFYL GRKY FLAFS+NQLRDRSAWFFAED  +   ++ SWMG+
Sbjct: 481  PQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWMGR 540

Query: 1619 FSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALEV 1798
            F+NRN+AKCAARMG CFSSTYA+VEVP  +V+    DIKRN YTFSDGIGK++P+LALEV
Sbjct: 541  FTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALEV 600

Query: 1799 AEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSWT 1978
            A+KL+L  N PCAYQIRYAG KGVV  W     D  +LSLRPSM+KF+S HTILEICSWT
Sbjct: 601  AQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSWT 660

Query: 1979 RLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGNT 2158
            R QPGFLNRQI+TLLSAL V D+IFW+MQ  M+  LNQML+DTD+AFDV+TASCAE GN 
Sbjct: 661  RFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGNV 720

Query: 2159 ASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQGQ 2338
            A+IML+AGF PQ EPHLRGML+ IR AQL  LREK+RIFV  GRWLMGC DEL VLEQGQ
Sbjct: 721  AAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQ 780

Query: 2339 CFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGLE 2518
            CFIQVSNPS+ENCF+KHGSRF E   NL VI+G+VVIAKNPCLHPGDVR+L+AV+VP L 
Sbjct: 781  CFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDLH 840

Query: 2519 HLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKELP 2698
            HL DCL+FPQKG+RPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW PM+Y AAE K+L 
Sbjct: 841  HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQLT 900

Query: 2699 RDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPKT 2878
            R V   DII+FF+KNMVN++LGTICNAHVVH+D+SE+GALDEKC KLA+LAATAVDFPKT
Sbjct: 901  RPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPKT 960

Query: 2879 GKIVNMPHSLRPKLYPDFMGKE 2944
            GKIV MP +L+PKLYPDFMGK+
Sbjct: 961  GKIVTMPFNLKPKLYPDFMGKD 982


>ref|XP_022731356.1| RNA-dependent RNA polymerase 6-like [Durio zibethinus]
 ref|XP_022731357.1| RNA-dependent RNA polymerase 6-like [Durio zibethinus]
 ref|XP_022731358.1| RNA-dependent RNA polymerase 6-like [Durio zibethinus]
          Length = 1197

 Score = 1357 bits (3512), Expect = 0.0
 Identities = 660/983 (67%), Positives = 793/983 (80%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M+S+ +++  +VTQVSVGG D  V AK L+DYLE + GL+WRCRLK S TPP++YP FE 
Sbjct: 1    MESEGSERDTVVTQVSVGGFDRHVKAKDLMDYLENEVGLVWRCRLKTSWTPPESYPNFEI 60

Query: 185  -DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D   I   DDY+KV PHAFVH+    +V  A++AA R ELV NN+ LKV++GPEN Y +
Sbjct: 61   PDTTVIPTTDDYNKVVPHAFVHFASPLTVNWAVDAAGRTELVFNNQLLKVSLGPENPYYL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            N+ RR  TPF L +V LE+G L+++D FFVGW+G  SGVDFL+DPFD +CKF F+++TAF
Sbjct: 121  NRRRRTTTPFNLPDVSLEIGTLASKDEFFVGWKGPLSGVDFLVDPFDGTCKFRFSRDTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLV--FQLGTPPVIFYRTADDDIHIT 715
            SFKGT  +AVIKC++KVEFLVR++N IK+Y +   LV   QL + P ++YRTADD+I  +
Sbjct: 181  SFKGTTEHAVIKCDFKVEFLVREINEIKQYPDPSCLVVLLQLASSPWVWYRTADDEIEES 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P + LDDDD WIRTTDFTPSGAIGRCNTYRV IR R   K +KA+ +LKE+RV +++ +
Sbjct: 241  VPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVIIRPRHGLKLRKAMDYLKERRVPVDYLR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              LR+  EP FG  M D  + I Y++ I F I+FLVN+VMH+ I  QH+ +E  F+LLR 
Sbjct: 301  LPLRIGNEPDFGRSMSDPFYYIDYKEGIPFDIMFLVNAVMHKGIFIQHRLSEDFFNLLRD 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            Q  EVNVAALKHI SYR P+YD + RL++V  WLL NPKL + P   +D +E+RRLVITP
Sbjct: 361  QSREVNVAALKHIYSYRRPVYDAYKRLKVVHDWLLRNPKLFKNPKRLDDLVEIRRLVITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KAYCL PEVELSNRVLR Y+EV+DRFLRVTFMDEGM+ +N NVL +Y A IV+D+TS+ 
Sbjct: 421  TKAYCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNANVLTYYAASIVRDVTSTS 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
             +QKT +F+RVK+IL+ GFYL GRKY FLAFSANQLRDRSAWFFAEDG ++   I+SWMG
Sbjct: 481  FSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSANQLRDRSAWFFAEDGNISVLNIISWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF NRNIAKCAARMGQCFSSTYATVEVP  EV+ +L DI+RNNY FSDGIGK++P+LA+E
Sbjct: 541  KFQNRNIAKCAARMGQCFSSTYATVEVPSTEVNPDLTDIERNNYVFSDGIGKITPDLAME 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VA+KL+L  N PCAYQIRYAGCKGVV  WP + GD I+LSLRPSMNKF S HT LEICSW
Sbjct: 601  VAQKLKLDLNPPCAYQIRYAGCKGVVACWPGE-GDGIRLSLRPSMNKFHSNHTTLEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLS L V D++FW MQ  MV  LN++LVDTD AF+VIT+SCAE G+
Sbjct: 660  TRFQPGFLNRQIITLLSTLGVPDEVFWGMQKTMVSKLNKILVDTDAAFEVITSSCAEQGH 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
            T +IML+AGFKPQ EPHLRGML+ +R +QL  LREK+RIFV  GRWLMG  DEL VLEQG
Sbjct: 720  TPAIMLSAGFKPQIEPHLRGMLTCVRASQLWGLREKARIFVHSGRWLMGVLDELGVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSNPSIENCF KHGSRF ETK+N  VI+G VVIAKNPCLHPGD+R+L+AV+ PGL
Sbjct: 780  QCFIQVSNPSIENCFLKHGSRFAETKKNFEVIKGLVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKG+RPHTDEASGSDLDGDLYFVTW+E LIPPS++SWPPM+Y   E K L
Sbjct: 840  HHLYDCLVFPQKGERPHTDEASGSDLDGDLYFVTWEELLIPPSRQSWPPMQYDPGEPKLL 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R V H D+I+FF+KNMVN+SLGTICNAHVVH+D+SE+GALDEKC  LAELAATAVDFPK
Sbjct: 900  QRPVNHKDLIEFFSKNMVNESLGTICNAHVVHADLSEHGALDEKCVYLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGKIV+MP  L+PK YPDFMGKE
Sbjct: 960  TGKIVSMPAQLKPKHYPDFMGKE 982


>ref|XP_017983705.1| PREDICTED: RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score = 1357 bits (3512), Expect = 0.0
 Identities = 657/983 (66%), Positives = 794/983 (80%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M+S  ++K  +VTQVSVGG    V AK L++Y + + G++WRCRLK S TPP++YP FE 
Sbjct: 1    MESQGSEKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEI 60

Query: 185  -DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D   IQ+ DDY KVEPHAFVH+    +   A++AA R ELV NN+ LKV++GPEN Y +
Sbjct: 61   LDSTVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            N+ RR  TPF+LS+V L++G + +RD FFVGWRG   GVDFL+DPFD +CKF F+++TAF
Sbjct: 121  NRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLV--FQLGTPPVIFYRTADDDIHIT 715
            SFKGT  YAVIKC++KVEFLVRD+N IK+Y     LV   QL + P ++YRTADD+I  +
Sbjct: 181  SFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEES 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P + LDDDD WIRTTDFTPSGAIGRCNTYRV IR R   K KKAL +L+EQRV +++ +
Sbjct: 241  VPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYVR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              LR+ +EP FG  M D  + I Y++ I F+I+FLVN+VMH+ I NQHQ +E  F+LLR 
Sbjct: 301  WPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRD 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            QP EVNVAALKHI SYR P++D + RL+ V  WLL NP L + P + +D +E+RRLVITP
Sbjct: 361  QPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KA+CL PEVELSNRVLR Y+EV+DRFLRVTFMDEGM+ +N NVL +Y A IV+D+TS+ 
Sbjct: 421  TKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTSTF 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
             +QKT +F+RV++IL+ GFYL GRKY FLAFSANQLRD SAWFFAEDGK +  QIL WMG
Sbjct: 481  FSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF+NRNIAKCAARMGQCFSSTYATVEVP  EV+  L DI+RN Y FSDGIGK++P+LA E
Sbjct: 541  KFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKE 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VA+KL+L  N PCAYQIRYAGCKGVV  WP++ GD ++LSLR SMNKF S+HT LEICSW
Sbjct: 601  VAQKLKLDLNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRCSMNKFFSDHTTLEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLS   V D++FW+MQ  MV  LN++LVDTDVAF+V+T+SC+E GN
Sbjct: 660  TRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSEQGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
             A+IML+AGFKPQTEPHLRG+L+ +R +QL  LREK+RIFV  GRWLMG  DEL VLEQG
Sbjct: 720  AAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELGVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSNPS+ENCF KHGSRF ETK+N  VI+G VVIAKNPCLHPGD+R+L+AV+ PGL
Sbjct: 780  QCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SWPPM+Y   E KE+
Sbjct: 840  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEI 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R+V H DIIDFF KNMVN+ LGTICNAHVVH+D+SEYGALDEKC  LAELAATAVDFPK
Sbjct: 900  QREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGKIV+MP +L+PKLYPDFMGKE
Sbjct: 960  TGKIVSMPANLKPKLYPDFMGKE 982


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score = 1357 bits (3512), Expect = 0.0
 Identities = 657/983 (66%), Positives = 794/983 (80%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M+S  ++K  +VTQVSVGG    V AK L++Y + + G++WRCRLK S TPP++YP FE 
Sbjct: 1    MESQGSEKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEI 60

Query: 185  -DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D   IQ+ DDY KVEPHAFVH+    +   A++AA R ELV NN+ LKV++GPEN Y +
Sbjct: 61   LDSTVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            N+ RR  TPF+LS+V L++G + +RD FFVGWRG   GVDFL+DPFD +CKF F+++TAF
Sbjct: 121  NRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLV--FQLGTPPVIFYRTADDDIHIT 715
            SFKGT  YAVIKC++KVEFLVRD+N IK+Y     LV   QL + P ++YRTADD+I  +
Sbjct: 181  SFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEES 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P + LDDDD WIRTTDFTPSGAIGRCNTYRV IR R   K KKAL +L+EQRV +++ +
Sbjct: 241  VPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYVR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              LR+ +EP FG  M D  + I Y++ I F+I+FLVN+VMH+ I NQHQ +E  F+LLR 
Sbjct: 301  WPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLRD 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            QP EVNVAALKHI SYR P++D + RL+ V  WLL NP L + P + +D +E+RRLVITP
Sbjct: 361  QPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            +KA+CL PEVELSNRVLR Y+EV+DRFLRVTFMDEGM+ +N NVL +Y A IV+D+TS+ 
Sbjct: 421  TKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTSTF 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
             +QKT +F+RV++IL+ GFYL GRKY FLAFSANQLRD SAWFFAEDGK +  QIL WMG
Sbjct: 481  FSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF+NRNIAKCAARMGQCFSSTYATVEVP  EV+  L DI+RN Y FSDGIGK++P+LA E
Sbjct: 541  KFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKE 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VA+KL+L  N PCAYQIRYAGCKGVV  WP++ GD ++LSLR SMNKF S+HT LEICSW
Sbjct: 601  VAQKLKLDLNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRCSMNKFFSDHTTLEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLS   V D++FW+MQ  MV  LN++LVDTDVAF+V+T+SC+E GN
Sbjct: 660  TRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSEQGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
             A+IML+AGFKPQTEPHLRG+L+ +R +QL  LREK+RIFV  GRWLMG  DEL VLEQG
Sbjct: 720  AAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELGVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSNPS+ENCF KHGSRF ETK+N  VI+G VVIAKNPCLHPGD+R+L+AV+ PGL
Sbjct: 780  QCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SWPPM+Y   E KE+
Sbjct: 840  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEI 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R+V H DIIDFF KNMVN+ LGTICNAHVVH+D+SEYGALDEKC  LAELAATAVDFPK
Sbjct: 900  QREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGKIV+MP +L+PKLYPDFMGKE
Sbjct: 960  TGKIVSMPANLKPKLYPDFMGKE 982


>ref|XP_021597106.1| RNA-dependent RNA polymerase 6 [Manihot esculenta]
 gb|OAY27377.1| hypothetical protein MANES_16G121400 [Manihot esculenta]
          Length = 1199

 Score = 1355 bits (3508), Expect = 0.0
 Identities = 654/985 (66%), Positives = 799/985 (81%), Gaps = 5/985 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFE- 181
            M+ ++N+K  +VTQVS+GG ++ V AK L+ YLE++ GL+WRCRLK S TPP++YP F+ 
Sbjct: 1    MEIEKNEKDTVVTQVSIGGFNSRVKAKDLVAYLESEIGLVWRCRLKTSWTPPESYPNFDI 60

Query: 182  ADLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             +   +Q+ D ++K+EPHAFVH+    S   A  AA R EL LN++ LKV++GPEN Y M
Sbjct: 61   TNTAGVQRTDGHNKIEPHAFVHFASPQSATWAKNAAGRCELFLNDRPLKVSLGPENPYHM 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            NQ RR  TPF+LS+V +E+G LS R+ F VGW G  SGVDFL+DPFD +CKF FT++TAF
Sbjct: 121  NQRRRTTTPFKLSDVHVEIGTLS-RNEFLVGWSGPSSGVDFLVDPFDGTCKFCFTRDTAF 179

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDN----HLNLVFQLGTPPVIFYRTADDDIH 709
            S K T  +AVI+C++K+EFLVRD+N +K+Y +     L ++ QL + P ++YRTADDDI 
Sbjct: 180  SVKDTTEHAVIRCDFKLEFLVRDINEVKQYTDWNTSSLVILLQLVSAPFVWYRTADDDIE 239

Query: 710  ITHPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEH 889
            +  P   LDDDDPWIRTTDFTPSGAIGRCN+YRVSI  R   K  +AL +LKE+RV +E 
Sbjct: 240  VLAPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLNRALNYLKERRVQLEF 299

Query: 890  PKTKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLL 1069
             K  L+   EP +G+ M DA F IH+++ I+F+++FLVN+VMH+ I NQHQ ++  FDLL
Sbjct: 300  LKMPLKNSNEPEYGMPMSDAFFCIHHKEGIAFEVMFLVNAVMHKGIFNQHQLSDSFFDLL 359

Query: 1070 RSQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVI 1249
            RSQP +VN++ALKHICSY+ P++D +  L+ VQ+WLLNNPKL + P + +D +E+RRL I
Sbjct: 360  RSQPLDVNLSALKHICSYKRPVFDAYCCLKAVQQWLLNNPKLFKSPKQLDDIVEIRRLAI 419

Query: 1250 TPSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITS 1429
            TP++AYCLPPEVELSNRVLR Y++++DRFLRVTFMDEG++ +N N L +Y APIV++ITS
Sbjct: 420  TPTRAYCLPPEVELSNRVLRKYKDIADRFLRVTFMDEGLQTINANTLTYYVAPIVREITS 479

Query: 1430 SHIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSW 1609
            +  +QKT +F+RVK IL+ GFYL GR+Y FLAFS+NQLRDRSAWFFAE+ +++  QI SW
Sbjct: 480  NSFSQKTRVFKRVKGILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAENAEISVHQIRSW 539

Query: 1610 MGKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELA 1789
            MG+F+NRNIAKCAARMGQCFSSTYATVEVP  EV+L L DI+RN Y FSDGIG ++P+LA
Sbjct: 540  MGRFTNRNIAKCAARMGQCFSSTYATVEVPSGEVNLSLPDIERNGYIFSDGIGTITPDLA 599

Query: 1790 LEVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEIC 1969
             EVAEKL+L  N PCAYQIRYAGCKGVV  WP  +GD I+LSLRPSMNKF+S HT LEIC
Sbjct: 600  KEVAEKLKLDANPPCAYQIRYAGCKGVVACWP-AQGDGIRLSLRPSMNKFQSNHTTLEIC 658

Query: 1970 SWTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAES 2149
            SWTR QPGFLNRQIITLLS L+V D+IFW+MQ  MV  L+QML+D DVAFDVITASCAE 
Sbjct: 659  SWTRFQPGFLNRQIITLLSVLQVPDEIFWEMQFDMVSKLDQMLMDADVAFDVITASCAEQ 718

Query: 2150 GNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLE 2329
            GNTA+IML+AGFKPQ EPHL+GML+ IR AQL  LREK+RIFV  GRWLMGC DEL VLE
Sbjct: 719  GNTAAIMLSAGFKPQKEPHLQGMLTCIRAAQLWGLREKARIFVSSGRWLMGCLDELGVLE 778

Query: 2330 QGQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVP 2509
            QGQCFIQVSNPS+ENCF KHGSRF E K+NL VI+G VVIAKNPCLHPGDVR+L+AV+ P
Sbjct: 779  QGQCFIQVSNPSLENCFLKHGSRFSEIKKNLEVIKGTVVIAKNPCLHPGDVRILEAVDAP 838

Query: 2510 GLEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAK 2689
             L HL DCLIFPQKGDRPHT+EASGSDLDGDLYFVTWDE+LIPPSKRSW PM+Y AAEAK
Sbjct: 839  ELHHLHDCLIFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMQYNAAEAK 898

Query: 2690 ELPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDF 2869
             L R VR  DIIDFF ++MVN++LG ICNAHVV +D+SEYGALD+ C KLAELAATAVDF
Sbjct: 899  VLNRPVRSQDIIDFFARHMVNENLGAICNAHVVRADLSEYGALDDNCIKLAELAATAVDF 958

Query: 2870 PKTGKIVNMPHSLRPKLYPDFMGKE 2944
            PKTG +V MP  LRPK+YPDFMGKE
Sbjct: 959  PKTGMLVTMPPYLRPKMYPDFMGKE 983


>ref|XP_021670990.1| RNA-dependent RNA polymerase 6-like [Hevea brasiliensis]
 ref|XP_021670991.1| RNA-dependent RNA polymerase 6-like [Hevea brasiliensis]
          Length = 1199

 Score = 1353 bits (3501), Expect = 0.0
 Identities = 650/985 (65%), Positives = 793/985 (80%), Gaps = 5/985 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFE- 181
            MD ++++K  +VTQVS GG D  + AK L+ YLE++ GL+WRCRLK S TPP++YP FE 
Sbjct: 1    MDIEKSEKDTVVTQVSFGGFDIHIKAKDLVAYLESEIGLVWRCRLKTSWTPPESYPNFEI 60

Query: 182  ADLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             +   +Q+ + + ++EPHAFVH+   +S   A  AA R EL LN++ LKV++GPEN Y M
Sbjct: 61   TNTADVQRTEGHKRIEPHAFVHFASPESATWAKNAAGRCELFLNDRPLKVSLGPENPYHM 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            NQ RR  TPF+LS+  +E+G +  R+ F V WRG  SGVDFL+DPFD +CKF FT++TAF
Sbjct: 121  NQRRRTTTPFKLSDARIEIGTVC-RNEFLVAWRGPSSGVDFLVDPFDGTCKFCFTRDTAF 179

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDN----HLNLVFQLGTPPVIFYRTADDDIH 709
            S K T  +AVI+C++K+EFLVRD+N +K+Y +     L ++ QL + P + YRTADDDI 
Sbjct: 180  SLKDTTEHAVIRCDFKLEFLVRDINEVKQYTDWSTSSLVILLQLASAPCVCYRTADDDIE 239

Query: 710  ITHPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEH 889
            +  P + LDDDDPWIRTTDFT SGAIGRCN+YRVSI  R   K  +AL +L E+RV +E 
Sbjct: 240  VLVPFDLLDDDDPWIRTTDFTASGAIGRCNSYRVSIPPRHGAKLNRALRYLGERRVQLEF 299

Query: 890  PKTKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLL 1069
             K  L++  EP +G+ M D  F IH+++ I+F ++FLVN+VMH+ I NQHQ ++  FDLL
Sbjct: 300  LKLPLKISNEPDYGMPMSDTFFCIHHKEGIAFDVMFLVNAVMHKGIFNQHQLSDSFFDLL 359

Query: 1070 RSQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVI 1249
            RSQP +VN+ ALKHICSY+ P+ D    L+ VQ WLLNNPKL  +P + +D +E+RRL I
Sbjct: 360  RSQPVDVNLVALKHICSYKRPVIDASISLKAVQLWLLNNPKLFNRPKQLDDIVEIRRLAI 419

Query: 1250 TPSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITS 1429
            TP+KAYCLPPEVELSNRVLR Y++++DRFLRVTFMDEG++ +N N L +Y APIV+DITS
Sbjct: 420  TPTKAYCLPPEVELSNRVLRKYKDIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITS 479

Query: 1430 SHIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSW 1609
            +  +QKT +F+RVK IL+ GFYL GR+Y FLAFS+NQLRDRSAWFFAE+G+++ +QI +W
Sbjct: 480  NSFSQKTRVFKRVKGILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAENGEISVQQIRNW 539

Query: 1610 MGKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELA 1789
            MG+F+NRNIAKCAARMGQCFSSTYATVEVP  E DL L DI+RN Y FSDGIG ++P+LA
Sbjct: 540  MGRFTNRNIAKCAARMGQCFSSTYATVEVPSGEADLSLPDIERNGYIFSDGIGIITPDLA 599

Query: 1790 LEVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEIC 1969
             EVAEKL+L  N PCAYQIRYAGCKGVV  WP  +GD I+LSLRPSM+KF S HT LEIC
Sbjct: 600  KEVAEKLKLDANPPCAYQIRYAGCKGVVACWP-AQGDGIRLSLRPSMDKFHSNHTTLEIC 658

Query: 1970 SWTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAES 2149
            SWTR QPGFLNRQIITLLS L+V D+IFW MQ+ MV  L+QML+D DVAFDVITASCAE 
Sbjct: 659  SWTRFQPGFLNRQIITLLSVLKVPDEIFWKMQIAMVSKLDQMLMDADVAFDVITASCAEQ 718

Query: 2150 GNTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLE 2329
            GNTA+IML+AGFKPQ EPHLRGML+ IR AQL  LREK+RIFV  GRWLMGC DEL VLE
Sbjct: 719  GNTAAIMLSAGFKPQKEPHLRGMLTCIRAAQLWGLREKARIFVHSGRWLMGCLDELGVLE 778

Query: 2330 QGQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVP 2509
            QGQCFIQVSNPS+ENCF KHGSRF E K+NL VI+G VVIAKNPCLHPGD+R+L+AV+ P
Sbjct: 779  QGQCFIQVSNPSLENCFLKHGSRFSEAKKNLQVIKGTVVIAKNPCLHPGDIRILEAVDAP 838

Query: 2510 GLEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAK 2689
            GL HL DCL+FPQKGDRPHT+EASGSDLDGDLYFVTWDE+L+PPSK+SW PM+Y AAEAK
Sbjct: 839  GLHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLLPPSKKSWTPMQYDAAEAK 898

Query: 2690 ELPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDF 2869
             L R VR  DIIDFF K+MVN++LG ICNAHVVH+D+SE+GALDE C KLAELAATAVDF
Sbjct: 899  LLHRPVRSQDIIDFFAKHMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDF 958

Query: 2870 PKTGKIVNMPHSLRPKLYPDFMGKE 2944
            PKTGK+V MPHSL+PK+YPDFMGKE
Sbjct: 959  PKTGKLVTMPHSLKPKMYPDFMGKE 983


>ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [Jatropha curcas]
 ref|XP_020534693.1| RNA-dependent RNA polymerase 6 isoform X2 [Jatropha curcas]
 gb|KDP38635.1| hypothetical protein JCGZ_03988 [Jatropha curcas]
          Length = 1198

 Score = 1352 bits (3499), Expect = 0.0
 Identities = 650/983 (66%), Positives = 792/983 (80%), Gaps = 3/983 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFE- 181
            M ++R++K  +VTQVS GG +N V AK L+ YLE   G +WRCRLK S TPP++YP F+ 
Sbjct: 1    MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKI 60

Query: 182  ADLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRM 361
             D   I + ++Y +VEPHAFVH+  ++S   A  AA R EL LN++ LKV++GPEN + +
Sbjct: 61   TDTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTL 120

Query: 362  NQLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAF 541
            NQ RRK  P +LS+V +E+G++ +RD F VGWRG  SGVDFL+DPFD +CKF FT++TAF
Sbjct: 121  NQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAF 180

Query: 542  SFKGTRNYAVIKCNYKVEFLVRDVNVIKEYDN--HLNLVFQLGTPPVIFYRTADDDIHIT 715
            S K T  +AVI+C++K+EFLVRD+N IK+Y +  +L ++ QL + P ++YRTADDDI + 
Sbjct: 181  SIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVL 240

Query: 716  HPSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRVIIEHPK 895
             P   LDDDDPWIRTTDFTPSGAIGRCN+YRVSI  R   K ++A+ +LKE+RV ++  +
Sbjct: 241  VPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLR 300

Query: 896  TKLRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLRS 1075
              L++  EP +G+ M D  F IH ++ I+F+I+FLVN+VMH+ I NQHQ ++  FDLLR+
Sbjct: 301  RPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRN 360

Query: 1076 QPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVITP 1255
            QP ++NVAALKHICSY+ P++D   RL+ VQ+WLL NPKL + P + +D +++RRL ITP
Sbjct: 361  QPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITP 420

Query: 1256 SKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSSH 1435
            ++AYCLPPE+ELSNRVLR Y+  +DRFLRVTFMDEG++ +N N L +Y APIV+DITS+ 
Sbjct: 421  TRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 1436 IAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWMG 1615
             +QKT +F+RVK+IL+ GFYL GR+Y FLAFS+NQLRDRSAWFFAEDGK+   QI  WMG
Sbjct: 481  FSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMG 540

Query: 1616 KFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELALE 1795
            KF+N+NIAKCAARMGQCFSSTYATVEVP  EV+L   DI+RN YTFSDGIG ++P+LA  
Sbjct: 541  KFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKA 600

Query: 1796 VAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICSW 1975
            VAEKL+L  N PCAYQIRYAGCKGVV  WP  +GD I+LSLRPSMNKF+S HT LEICSW
Sbjct: 601  VAEKLKLDINPPCAYQIRYAGCKGVVACWP-AQGDGIRLSLRPSMNKFQSNHTTLEICSW 659

Query: 1976 TRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESGN 2155
            TR QPGFLNRQIITLLS L V D+IFW MQ+ MV  LN+ML D DVAFDVITASC E GN
Sbjct: 660  TRFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGN 719

Query: 2156 TASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQG 2335
            TA++ML+AGFKPQ EPHLRGML+ IR AQ  DLREK+RIFV  GRWLMGC DEL VLEQG
Sbjct: 720  TAALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQG 779

Query: 2336 QCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPGL 2515
            QCFIQVSNPS+E CF+KHGSRF ETK+NL VI G VVIAKNPCLHPGDVR+L+AV+ PGL
Sbjct: 780  QCFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGL 839

Query: 2516 EHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKEL 2695
             HL DCL+FPQKGDRPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW PM+Y AAE K L
Sbjct: 840  CHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLL 899

Query: 2696 PRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFPK 2875
             R V H DIIDFF KNMVN+SLG ICNAHVV +D+SEYGALDE C KLAELAATAVDFPK
Sbjct: 900  SRPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPK 959

Query: 2876 TGKIVNMPHSLRPKLYPDFMGKE 2944
            TGK+V +P  L+PK+YPDFMGKE
Sbjct: 960  TGKLVTLPQYLKPKMYPDFMGKE 982


>ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana attenuata]
 gb|OIT39130.1| rna-dependent rna polymerase 6 [Nicotiana attenuata]
          Length = 1197

 Score = 1351 bits (3497), Expect = 0.0
 Identities = 655/984 (66%), Positives = 801/984 (81%), Gaps = 4/984 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M S+ ++K ++VTQ+SVGG DN+V AKML +YLE + G +WRCRLK SSTPPD+YP F+ 
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            D +R+Q++ DY+KV PHAFVH+  S+S + AL AA   EL+L  K L V++GPEN YR+N
Sbjct: 61   DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            Q RR   PF+ S+V +E+G+L ++D+F VGWRG  +GVDFL+DPF+ +CK LFTK+TAFS
Sbjct: 121  QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLVF--QLGTPPVIFYRTADDDIHITH 718
            F+G   +A+IKCN+K+EFLVR++N IK+  +  +LV   QL + P++FYRTADDDI  + 
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 719  PSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRV-IIEHPK 895
              + LDDDD WIRTTD T SGAIGRCNTYR+SIR R+ P  +KA+A+    RV ++E   
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 896  TK-LRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLR 1072
             K LRV +EP FG+ M D  F    E  ISFK++FLVN+V+H+ I+NQHQ T + F LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQNE-GISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 1073 SQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVIT 1252
            S  EEVN+AALKH+ SY+ P+ D   +L  ++KWLL NPKL+E+  E +D +EVRRLVIT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 1253 PSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSS 1432
            P+KAYCLPP VELSNRVLR+Y+ V+DRFLRVTFMDEGM+ LN NVL +Y A IV++ITS+
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 1433 HIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWM 1612
               Q+T +F+RVK+ILS+GF+L GRKY FLAFSANQLRDRSAWFFAED K+    I+SWM
Sbjct: 480  SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 1613 GKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELAL 1792
            G+FSNRN+AKCAARMGQCFSSTYATVEVP  EV+ EL DI+RN Y FSDGIG +S +LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAV 599

Query: 1793 EVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICS 1972
            EVAEKL L+ N P AYQIRYAGCKGVV  WP K  D I+LSLRPSM KF+S HTILEICS
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTILEICS 658

Query: 1973 WTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESG 2152
            WTR QPGFLNRQI+TLLS+L+VKD IFW+MQ +M+  L++MLVD+DVAFDVITASCAE+G
Sbjct: 659  WTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAG 718

Query: 2153 NTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQ 2332
            NTA+IML+AGFKPQ+EPHLRGMLSSIR +QL DLR K+RIFV  GRWLMGC DEL  LEQ
Sbjct: 719  NTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQ 778

Query: 2333 GQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPG 2512
            GQCFIQVS+PS+ENCF KHG +F + K+NL V++G VVIAKNPCLHPGDVR+L+AV+VPG
Sbjct: 779  GQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPG 838

Query: 2513 LEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKE 2692
            L HL DCL+FPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW PM Y  AE K+
Sbjct: 839  LHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQ 898

Query: 2693 LPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFP 2872
            + R V H DIIDFF+KNMV +SLG ICNAHVVH+D+SE+GALDEKC KLAELAA AVDFP
Sbjct: 899  MGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFP 958

Query: 2873 KTGKIVNMPHSLRPKLYPDFMGKE 2944
            KTGK+V MP  L+PK+YPDFMGKE
Sbjct: 959  KTGKLVTMPFDLKPKMYPDFMGKE 982


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 1351 bits (3497), Expect = 0.0
 Identities = 655/984 (66%), Positives = 801/984 (81%), Gaps = 4/984 (0%)
 Frame = +2

Query: 5    MDSDRNDKKMIVTQVSVGGIDNEVTAKMLLDYLEAKTGLIWRCRLKKSSTPPDTYPEFEA 184
            M S+ ++K ++VTQ+SVGG DN+V AKML +YLE + G +WRCRLK SSTPPD+YP F+ 
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60

Query: 185  DLDRIQKVDDYDKVEPHAFVHYVDSDSVRTALEAARRGELVLNNKTLKVNIGPENGYRMN 364
            D +R+Q++ DY+KV PHAFVH+  S+S + AL AA   EL+L  K L V++GPEN YR+N
Sbjct: 61   DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120

Query: 365  QLRRKETPFRLSNVGLEVGLLSNRDNFFVGWRGADSGVDFLIDPFDRSCKFLFTKETAFS 544
            Q RR   PF+ S+V +E+G+L ++D+F VGWRG  +GVDFL+DPF+ +CK LFTK+TAFS
Sbjct: 121  QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180

Query: 545  FKGTRNYAVIKCNYKVEFLVRDVNVIKEYDNHLNLVF--QLGTPPVIFYRTADDDIHITH 718
            F+G   +A+IKCN+K+EFLVR++N IK+  +  +LV   QL + P++FYRTADDDI  + 
Sbjct: 181  FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240

Query: 719  PSETLDDDDPWIRTTDFTPSGAIGRCNTYRVSIRIRDVPKAKKALAFLKEQRV-IIEHPK 895
              + LDDDD WIRTTD T SGAIGRCNTYR+SIR R+ P  +KA+A+    RV ++E   
Sbjct: 241  AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300

Query: 896  TK-LRVEEEPGFGILMQDALFSIHYEQDISFKILFLVNSVMHRCIINQHQFTEKVFDLLR 1072
             K LRV +EP FG+ M D  F    E  ISFK++FLVN+V+H+ I+NQHQ T + F LLR
Sbjct: 301  RKMLRVRDEPDFGVSMSDPFFCFQNE-GISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359

Query: 1073 SQPEEVNVAALKHICSYRHPLYDGFTRLEIVQKWLLNNPKLIEKPLEQNDSIEVRRLVIT 1252
            S  EEVN+AALKH+ SY+ P+ D   +L  ++KWLL NPKL+E+  E +D +EVRRLVIT
Sbjct: 360  SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419

Query: 1253 PSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMKKLNNNVLNFYPAPIVKDITSS 1432
            P+KAYCLPP VELSNRVLR+Y+ V+DRFLRVTFMDEGM+ LN NVL +Y A IV++ITS+
Sbjct: 420  PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479

Query: 1433 HIAQKTTMFRRVKNILSQGFYLSGRKYFFLAFSANQLRDRSAWFFAEDGKVTCKQILSWM 1612
               Q+T +F+RVK+ILS+GF+L GRKY FLAFSANQLRDRSAWFFAED K+    I+SWM
Sbjct: 480  SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539

Query: 1613 GKFSNRNIAKCAARMGQCFSSTYATVEVPRHEVDLELKDIKRNNYTFSDGIGKMSPELAL 1792
            G+FSNRN+AKCAARMGQCFSSTYATVEVP  EV+ EL DI+RN Y FSDGIG +S +LA+
Sbjct: 540  GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAV 599

Query: 1793 EVAEKLQLTDNQPCAYQIRYAGCKGVVVWWPDKKGDSIKLSLRPSMNKFESEHTILEICS 1972
            EVAEKL L+ N P AYQIRYAGCKGVV  WP K  D I+LSLRPSM KF+S HTILEICS
Sbjct: 600  EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTILEICS 658

Query: 1973 WTRLQPGFLNRQIITLLSALEVKDDIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAESG 2152
            WTR QPGFLNRQI+TLLS+L+VKD IFW+MQ +M+  L++MLVD+DVAFDVITASCAE+G
Sbjct: 659  WTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAG 718

Query: 2153 NTASIMLAAGFKPQTEPHLRGMLSSIRVAQLEDLREKSRIFVQEGRWLMGCFDELAVLEQ 2332
            NTA+IML+AGFKPQ+EPHLRGMLSSIR +QL DLR K+RIFV  GRWLMGC DEL  LEQ
Sbjct: 719  NTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQ 778

Query: 2333 GQCFIQVSNPSIENCFAKHGSRFVETKRNLTVIEGYVVIAKNPCLHPGDVRVLKAVNVPG 2512
            GQCFIQVS+PS+ENCF KHG +F + K+NL V++G VVIAKNPCLHPGDVR+L+AV+VPG
Sbjct: 779  GQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPG 838

Query: 2513 LEHLVDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKRSWPPMEYTAAEAKE 2692
            L HL DCL+FPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW PM Y  AE K+
Sbjct: 839  LHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQ 898

Query: 2693 LPRDVRHTDIIDFFTKNMVNDSLGTICNAHVVHSDMSEYGALDEKCTKLAELAATAVDFP 2872
            + R V H DIIDFF+KNMV +SLG ICNAHVVH+D+SE+GALDEKC KLAELAA AVDFP
Sbjct: 899  MGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFP 958

Query: 2873 KTGKIVNMPHSLRPKLYPDFMGKE 2944
            KTGK+V MP  L+PK+YPDFMGKE
Sbjct: 959  KTGKLVTMPFDLKPKMYPDFMGKE 982