BLASTX nr result
ID: Chrysanthemum21_contig00012775
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00012775
(3218 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sati... 1660 0.0
ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Heliant... 1604 0.0
gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy... 1581 0.0
ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europae... 1380 0.0
gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i... 1367 0.0
ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Z... 1350 0.0
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1347 0.0
gb|APR63701.1| SILENCING DEFECTIVE family protein 1 [Populus tom... 1343 0.0
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 1343 0.0
ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 1343 0.0
ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indi... 1342 0.0
ref|XP_021276585.1| RNA-dependent RNA polymerase 6 [Herrania umb... 1341 0.0
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 1340 0.0
ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [N... 1339 0.0
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 1339 0.0
ref|XP_017983705.1| PREDICTED: RNA-dependent RNA polymerase 6 [T... 1338 0.0
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao] 1338 0.0
ref|XP_016477231.1| PREDICTED: RNA-dependent RNA polymerase 6 [N... 1338 0.0
ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [N... 1337 0.0
ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [J... 1337 0.0
>ref|XP_023763421.1| RNA-dependent RNA polymerase 6 [Lactuca sativa]
gb|PLY85763.1| hypothetical protein LSAT_1X44761 [Lactuca sativa]
Length = 1199
Score = 1660 bits (4299), Expect = 0.0
Identities = 803/1017 (78%), Positives = 896/1017 (88%), Gaps = 1/1017 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
MES+ +DK+L+V QVS+GGFDN +TAK LLDY + G VWRCR+KKSSTPPDTYPE+DA
Sbjct: 1 MESERSDKELVVTQVSIGGFDNNITAKRLLDYIEAKAGQVWRCRLKKSSTPPDTYPEFDA 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
DL+ I+K+NDYEKV+PHAFV FV PD VN + EAE PENPYRMN
Sbjct: 61 DLENIQKLNDYEKVEPHAFVHFVDPDSVNSIKEAEGKCELVLDNNYLKVNLGPENPYRMN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR + P ++ NV+LE GLL+ D F+VGWRG SG+DFL+DPFD SCKFLFTK+T FS
Sbjct: 121 QRRRTKTPFKLSNVVLEIGLLASRDKFLVGWRGPSSGLDFLIDPFDCSCKFLFTKDTAFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDP-KVLVFQLASSPLIFYRTADDEI 885
FKGTK+HAVIKCN+KVEFL RDVN IKEY +Y +VLVFQLAS+PLI YRTADD+I
Sbjct: 181 FKGTKDHAVIKCNYKVEFLARDVNDIKEY--MDYSQASQVLVFQLASAPLISYRTADDDI 238
Query: 886 AITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIE 1065
AITHPS+MLDDDDPWIRTTDFT GAIGRCNTYRI+IRIRDVPK ++ALEFL++QRVHI+
Sbjct: 239 AITHPSEMLDDDDPWIRTTDFTPGGAIGRCNTYRILIRIRDVPKVKKALEFLKEQRVHID 298
Query: 1066 HVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDL 1245
H LKV EP FG+P++D F I +K DI FK LFLVN+V+++CIINQHQFTE+VFDL
Sbjct: 299 HPTRNLKVENEPDFGSPLRDPFFCIQYKMDIPFKVLFLVNAVLNKCIINQHQFTEKVFDL 358
Query: 1246 LRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRL 1425
LR EE+ VAALKHI SY R + +GFT +++VQ+W +NNPKL+++ Q D+IEVRRL
Sbjct: 359 LRDAKEEVTVAALKHICSY-RRPVYDGFTRVKIVQEWLMNNPKLIDEEGGQKDIIEVRRL 417
Query: 1426 IITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDI 1605
IITP+K YCLPPEVELSNRVLRHYR+VSDRFLRVTFMDEGM TLNNHVL+FYPAPIVKDI
Sbjct: 418 IITPSKAYCLPPEVELSNRVLRHYRDVSDRFLRVTFMDEGMRTLNNHVLNFYPAPIVKDI 477
Query: 1606 TSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQIL 1785
TSSFIAQKTTMFRRVK+ILSQG Y+CGR+YSFLAFSANQLRDRSAWFFAE +K+TCK I+
Sbjct: 478 TSSFIAQKTTMFRRVKNILSQGFYLCGRKYSFLAFSANQLRDRSAWFFAEKDKLTCKDII 537
Query: 1786 SWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPE 1965
SWMGKFNNKN+AKCAARMGQCFSSTYATVEVPR+EVDL+LEDI RN Y FSDG+GK+SPE
Sbjct: 538 SWMGKFNNKNVAKCAARMGQCFSSTYATVEVPRHEVDLELEDIKRNGYTFSDGVGKISPE 597
Query: 1966 LALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILE 2145
LALEVAEKLQL +NQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFES+HT+LE
Sbjct: 598 LALEVAEKLQLKDNQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESDHTVLE 657
Query: 2146 ICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCA 2325
ICSWTRLQPGFLNRQIITLLSAL V+D+IFW+MQMKMV LN ML DTDVAFDV+TASCA
Sbjct: 658 ICSWTRLQPGFLNRQIITLLSALNVEDDIFWNMQMKMVKKLNLMLTDTDVAFDVLTASCA 717
Query: 2326 ESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAV 2505
ESGNTASIML AGFKP +EPHLRGMLSSIRVAQL+DLREKSRIFVQDGRWLMGCLDEL V
Sbjct: 718 ESGNTASIMLGAGFKPQSEPHLRGMLSSIRVAQLEDLREKSRIFVQDGRWLMGCLDELGV 777
Query: 2506 LEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVN 2685
LEQGQCFIQVSNPS+ENCFAKHGSRF +T RNL VIEG VV+AKNPCLHPGDVRVLKAVN
Sbjct: 778 LEQGQCFIQVSNPSVENCFAKHGSRFCDTDRNLKVIEGNVVIAKNPCLHPGDVRVLKAVN 837
Query: 2686 VPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAE 2865
VPGLEHL DCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDE LIPPSK SW PMEYTAAE
Sbjct: 838 VPGLEHLFDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEMLIPPSKTSWPPMEYTAAE 897
Query: 2866 AKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAV 3045
AK+LPRDV+HSDII+FFTKNMVND LGTICNAHVVHADMSD GALDEKC+KLAELAA AV
Sbjct: 898 AKQLPRDVKHSDIIEFFTKNMVNDSLGTICNAHVVHADMSDYGALDEKCVKLAELAATAV 957
Query: 3046 DFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
DFPKTGKIV+MPP LRPKLYPD+MGKE FQSYKS KILG+LYRQI+D +N D+ PSS
Sbjct: 958 DFPKTGKIVSMPPQLRPKLYPDYMGKESFQSYKSKKILGKLYRQIKDVYNDDVMPSS 1014
>ref|XP_022029697.1| RNA-dependent RNA polymerase 6-like [Helianthus annuus]
gb|OTG32623.1| putative RNA-dependent RNA polymerase 6 [Helianthus annuus]
Length = 1201
Score = 1604 bits (4154), Expect = 0.0
Identities = 784/1012 (77%), Positives = 882/1012 (87%), Gaps = 1/1012 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S+GND++L+V+QVS+GGF NEVTAK LLDY + G ++RCR+KKSSTPP+TYPE++A
Sbjct: 1 MGSEGNDRELVVSQVSIGGFGNEVTAKMLLDYLESTHGQIYRCRLKKSSTPPETYPEFNA 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
DLDQIK V DYEKV+PHAFV FV P+ V VLEA PENPYRMN
Sbjct: 61 DLDQIKIVTDYEKVEPHAFVHFVDPNSVTSVLEAAGRKELVLDKHVLKVSLGPENPYRMN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR ++ ++ NV+LE GL++ D+FVVGWRG SGVDFL+DPFD SCKFL TK+T F
Sbjct: 121 QRRRKKTSFKLSNVVLEIGLMTSRDDFVVGWRGPDSGVDFLIDPFDRSCKFLLTKDTAFC 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDP-KVLVFQLASSPLIFYRTADDEI 885
FKGTK+HAVI+CN+KVEFLVRDVN IKEY +Y + VLVFQLASSPLI YRTADD+I
Sbjct: 181 FKGTKDHAVIRCNYKVEFLVRDVNDIKEYT--DYSESCLVLVFQLASSPLISYRTADDDI 238
Query: 886 AITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIE 1065
T+P +MLDDDDPWIRTTDFT SGAIGRCNTYR+MIRIRD K ++ALEFL++QRVH+E
Sbjct: 239 INTYPFEMLDDDDPWIRTTDFTPSGAIGRCNTYRVMIRIRDGSKVKKALEFLKEQRVHVE 298
Query: 1066 HVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDL 1245
H KTKLK EP FG P+ D FSIH+K DI+FK +FLVNSV+HRCIINQHQFTE VFDL
Sbjct: 299 HRKTKLKAENEPEFGFPIPDPFFSIHYKPDISFKVMFLVNSVLHRCIINQHQFTENVFDL 358
Query: 1246 LRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRL 1425
LR Q EE+NVAALKHI +Y RH L +GF L+ VQ+W LN PK +EKPLEQNDVIEV RL
Sbjct: 359 LRDQSEEVNVAALKHICAY-RHPLYDGFKRLKTVQEWLLNTPKRIEKPLEQNDVIEVGRL 417
Query: 1426 IITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDI 1605
IITPTK Y LPPEVELSNRVLRHYR+VSDRFLRVTFMDEGM TLNN+VL+FYPAPIVKD+
Sbjct: 418 IITPTKAYALPPEVELSNRVLRHYRQVSDRFLRVTFMDEGMRTLNNNVLNFYPAPIVKDV 477
Query: 1606 TSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQIL 1785
TS+F+AQKTTMFRRVK ILS G ++ GR+Y FLAFSANQLRDRSAWFFAE+ KI+CK I+
Sbjct: 478 TSTFMAQKTTMFRRVKDILSNGFHLSGRQYCFLAFSANQLRDRSAWFFAENGKISCKNII 537
Query: 1786 SWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPE 1965
+WMG+FNNKNIAKCAARMGQCFSSTYATV+VPR+EV++KLEDI RN+Y FSDGIG++SPE
Sbjct: 538 AWMGRFNNKNIAKCAARMGQCFSSTYATVDVPRHEVNMKLEDIKRNNYTFSDGIGRISPE 597
Query: 1966 LALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILE 2145
LALEVAEKLQLT+NQPCAYQIRYAGCKGVV WP+K+G+N KLSLR SMNKFES+HT+LE
Sbjct: 598 LALEVAEKLQLTDNQPCAYQIRYAGCKGVVACWPNKEGENFKLSLRRSMNKFESDHTVLE 657
Query: 2146 ICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCA 2325
ICSWTRLQPGFLNRQIITLLSAL+VKDEIFWDMQMKMV LN ML +T+VAFDVITASCA
Sbjct: 658 ICSWTRLQPGFLNRQIITLLSALDVKDEIFWDMQMKMVEKLNLMLENTEVAFDVITASCA 717
Query: 2326 ESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAV 2505
ESGNTASIML +GF P TEPHLRGMLSSIRVAQL+DLREKSRIFV DGRWLMGC DEL V
Sbjct: 718 ESGNTASIMLGSGFDPKTEPHLRGMLSSIRVAQLEDLREKSRIFVNDGRWLMGCFDELGV 777
Query: 2506 LEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVN 2685
LEQGQCFIQVSNPS+ENCFAKHGSRF ET NLTVIEG V++AKNPCLHPGDVRVLKAVN
Sbjct: 778 LEQGQCFIQVSNPSVENCFAKHGSRFSETTSNLTVIEGTVIIAKNPCLHPGDVRVLKAVN 837
Query: 2686 VPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAE 2865
VPGLEHL DCL+FPQKGDRPHTDEASGSDLDGDLYFVTWDE+LIPPSK+SW PMEYTAAE
Sbjct: 838 VPGLEHLFDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKRSWPPMEYTAAE 897
Query: 2866 AKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAV 3045
AKEL RDVR +DI+DFFTKNMVND LGTICNAHVVHAD+SD GALDEKC+KLAELAA AV
Sbjct: 898 AKELTRDVRTADIVDFFTKNMVNDSLGTICNAHVVHADLSDDGALDEKCLKLAELAATAV 957
Query: 3046 DFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD 3201
DFPKTGKIVNMP L+PK YPDFMGKE+FQSYKS KILG+LYRQI+D +N+D
Sbjct: 958 DFPKTGKIVNMPAQLKPKQYPDFMGKENFQSYKSEKILGKLYRQIKDFYNSD 1009
>gb|KVH89612.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
var. scolymus]
Length = 1182
Score = 1581 bits (4094), Expect = 0.0
Identities = 778/1016 (76%), Positives = 870/1016 (85%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
ME++ +DK + + QVSVGGF + V AK LLDY +E G VWRCRVK SSTPP+TYPE+DA
Sbjct: 1 MEAERSDKDMEITQVSVGGFGDHVKAKMLLDYLEEIVGQVWRCRVKASSTPPNTYPEFDA 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
DL+ I+KV+DY+KV+PHAFV FV PD VN VLE E PENPYR
Sbjct: 61 DLENIQKVDDYKKVEPHAFVHFVDPDSVNSVLEIEGKGELVFLNNPSKVSLGPENPYR-- 118
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
I++ NV+LE G+ + DNF+VGWRG SG+DFL+DPFDYSCKFLFTK+T FS
Sbjct: 119 --------IKLSNVVLEIGMFASRDNFLVGWRGPDSGLDFLIDPFDYSCKFLFTKDTAFS 170
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
FKGTKNHAVIKCNFKVEFLVR++N IK+ VLVFQL S+PLI YRTADD+IA
Sbjct: 171 FKGTKNHAVIKCNFKVEFLVREINDIKDC----LQSHMVLVFQLVSAPLISYRTADDDIA 226
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
ITHP++MLDDDDPWIRTTDFT SGAIGRC+TYR++IRIRDVPKA++AL+FL Q V I+
Sbjct: 227 ITHPAEMLDDDDPWIRTTDFTPSGAIGRCHTYRVLIRIRDVPKAKKALDFLRGQSVPIDQ 286
Query: 1069 VKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLL 1248
+TKLKV EP FG P++D F I ++DDI+FK LFLVN+V+HR IINQHQF+E+VFDLL
Sbjct: 287 FRTKLKVQNEPEFGIPLRDPFFCIQYEDDISFKVLFLVNAVLHRGIINQHQFSEKVFDLL 346
Query: 1249 RGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLI 1428
R Q EE+NVAALKHI SY RH L +GFT L++VQ+W LNNPKL+EK + Q D+ EVRRL+
Sbjct: 347 RDQSEEVNVAALKHICSY-RHPLYDGFTRLKIVQEWLLNNPKLIEKQIXQKDITEVRRLV 405
Query: 1429 ITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDIT 1608
ITP+K YCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGM TLNNHVL+FYPA IVK
Sbjct: 406 ITPSKAYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMXTLNNHVLNFYPALIVK--- 462
Query: 1609 SSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQILS 1788
IAQKTTMFR+VK+ILS+G Y+CGRRY FLAFSANQLRDRSAWFFAE+ KI+C I +
Sbjct: 463 -GSIAQKTTMFRKVKNILSEGFYLCGRRYRFLAFSANQLRDRSAWFFAENGKISCTDITA 521
Query: 1789 WMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPEL 1968
WMGKF+N+N+AKCAARMGQCFSSTYATV+VPR EVDL LEDI RN YVFSDGIGKMSPEL
Sbjct: 522 WMGKFSNRNVAKCAARMGQCFSSTYATVKVPRAEVDLNLEDIKRNGYVFSDGIGKMSPEL 581
Query: 1969 ALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEI 2148
ALEVAEKLQL +NQPCAYQIRYAGCKGV+VWWP KKGDNIKLSLRPSMNKFES+HT+LEI
Sbjct: 582 ALEVAEKLQLKDNQPCAYQIRYAGCKGVIVWWPGKKGDNIKLSLRPSMNKFESDHTVLEI 641
Query: 2149 CSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAE 2328
CSWTRLQPGFLNRQIITLLSAL V D IFW MQ KMV NLNQML DTD+AFDVIT SCAE
Sbjct: 642 CSWTRLQPGFLNRQIITLLSALNVGDNIFWKMQTKMVRNLNQMLEDTDMAFDVITTSCAE 701
Query: 2329 SGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVL 2508
SG+TASIMLAAGFKP TEPHL GMLSSIRVAQLKDLREKSRIFV GR LMGCLDEL VL
Sbjct: 702 SGSTASIMLAAGFKPTTEPHLHGMLSSIRVAQLKDLREKSRIFVPKGRLLMGCLDELGVL 761
Query: 2509 EQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNV 2688
EQGQC+IQVSNPS+ENCF KHGSRF ETKRNLTVI+G VV+AKNPCLHPGDVRVL+AV+V
Sbjct: 762 EQGQCYIQVSNPSVENCFVKHGSRFSETKRNLTVIKGTVVIAKNPCLHPGDVRVLEAVDV 821
Query: 2689 PGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEA 2868
PGLEHL DCL+FPQKGDRPHTDEASGSDLDGDLYFVTWD++LIPPSKQSW PMEYTAAEA
Sbjct: 822 PGLEHLFDCLIFPQKGDRPHTDEASGSDLDGDLYFVTWDKNLIPPSKQSWPPMEYTAAEA 881
Query: 2869 KELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVD 3048
K LPRDV+HSDIIDFFTKNMVNDRLGTICNA+VVHADMSD GAL++ CIKLAELAAIAVD
Sbjct: 882 KLLPRDVKHSDIIDFFTKNMVNDRLGTICNAYVVHADMSDYGALEKNCIKLAELAAIAVD 941
Query: 3049 FPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
FPKTGKIVNMPP LRPKLYPDFMGKE FQSYKS KILG+LY ++DC TD+TPSS
Sbjct: 942 FPKTGKIVNMPPALRPKLYPDFMGKESFQSYKSKKILGKLYHHVKDCSATDVTPSS 997
>ref|XP_022845194.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
ref|XP_022845195.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
ref|XP_022845196.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
ref|XP_022845198.1| RNA-dependent RNA polymerase 6 [Olea europaea var. sylvestris]
Length = 1195
Score = 1380 bits (3573), Expect = 0.0
Identities = 659/1016 (64%), Positives = 810/1016 (79%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S G +K +++ Q+ VGGF++ VTAK L+DYF++N G+VWRCR+K SSTPP++YP Y+
Sbjct: 1 MASKGGEKDMVITQIGVGGFEDFVTAKMLMDYFEDNIGLVWRCRLKTSSTPPESYPSYEV 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D + +++ +DYEKVKPHAFV F + L+A PENP+RMN
Sbjct: 61 DTESVQRKHDYEKVKPHAFVHFALSSSAMSALDAAGRNELILGKNLLKVSLGPENPHRMN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
+RR PI++ NV +E GL+ D+F+VGWRG + GVDFLVDPF+ +CK LFTKET FS
Sbjct: 121 ERRRTIPPIKLSNVCVEIGLMRGQDDFLVGWRGPRDGVDFLVDPFNATCKLLFTKETVFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
FKG + VIKCNFKVEFL R++N IK Y +++ +++ QLASSP+++YRTADD+I
Sbjct: 181 FKGESKNTVIKCNFKVEFLPREINEIKRY--RDFSS-LIILLQLASSPIVYYRTADDDIE 237
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
+ P +LDDDDPWIRTTDFT SGAIGRCN YRI +R R+ P+ ++AL +L++ R+ + +
Sbjct: 238 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNIYRISVRPRNGPRFDKALAYLQEHRIPVLN 297
Query: 1069 VKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLL 1248
+ +V +EP FG P+ D F I +K+ I FK LFLVN++MH+ IINQHQ +++ F LL
Sbjct: 298 DSPEPRVRDEPDFGVPLPDPFFCIQYKEGITFKVLFLVNAIMHKGIINQHQMSDKFFHLL 357
Query: 1249 RGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLI 1428
R +PE +N+ ALKHI+S HT + +L VQKW L NPKLLE P E +D++EVRRLI
Sbjct: 358 RIRPERVNLVALKHIWSLKHHTWYDACKNLVFVQKWLLKNPKLLEGPQELDDIVEVRRLI 417
Query: 1429 ITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDIT 1608
ITP K YCLPPEVELSNRVLR+Y+ V+DRFLRVTFMDEGM LN +VL++YP+ I++DIT
Sbjct: 418 ITPAKAYCLPPEVELSNRVLRNYKNVADRFLRVTFMDEGMRKLNKNVLTYYPSGILRDIT 477
Query: 1609 SSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQILS 1788
S Q+T+MF+RVK ILS G Y+CGRRYSFLA+SANQLRD SAWFFAE+E + I+S
Sbjct: 478 SDSNPQRTSMFKRVKDILSNGFYLCGRRYSFLAYSANQLRDSSAWFFAENETVVVPSIMS 537
Query: 1789 WMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPEL 1968
WMG+F N+N+AKCAARMGQCFSSTYATVEVP EVD +L DI RN Y FSDGIGK+SP+L
Sbjct: 538 WMGRFTNRNVAKCAARMGQCFSSTYATVEVPAAEVDPELPDIQRNGYDFSDGIGKISPDL 597
Query: 1969 ALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEI 2148
A+ VAEKLQLT N PCAYQIRYAGCKGVV WP + + I L LRPSM KFES HTILEI
Sbjct: 598 AMRVAEKLQLTVNPPCAYQIRYAGCKGVVACWP-AENNGIHLYLRPSMKKFESNHTILEI 656
Query: 2149 CSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAE 2328
CSWTR QPGFLNRQIITLLSAL+VKD+IFW MQ MV L++MLVDTD AFD++TASCAE
Sbjct: 657 CSWTRFQPGFLNRQIITLLSALDVKDDIFWKMQEIMVSRLDRMLVDTDTAFDILTASCAE 716
Query: 2329 SGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVL 2508
GNTA+IML+AGF+P +EPHL GML+SIR AQL DLRE++RIFV GRWLMGCLDEL +L
Sbjct: 717 QGNTAAIMLSAGFRPQSEPHLCGMLTSIRAAQLGDLRERARIFVPSGRWLMGCLDELGIL 776
Query: 2509 EQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNV 2688
QGQCFIQVSNPS+E+CF KHGS+F ET +NL VI+G V +AKNPCLHPGDVR+L+AV++
Sbjct: 777 RQGQCFIQVSNPSLEDCFVKHGSKFSETNKNLRVIKGLVAIAKNPCLHPGDVRILEAVDI 836
Query: 2689 PGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEA 2868
PGL+HL DCLVFPQ GDRPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW+PMEY+ E
Sbjct: 837 PGLKHLYDCLVFPQNGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMEYSTGEV 896
Query: 2869 KELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVD 3048
K LPRDV+H DIIDFF+KNMVN+ LG ICNAHVVHAD+S+ GALD KCI+LAELAA AVD
Sbjct: 897 KTLPRDVKHKDIIDFFSKNMVNESLGAICNAHVVHADLSESGALDLKCIRLAELAATAVD 956
Query: 3049 FPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
FPKTGKIV MP L+PKLYPDFMGKE+FQSY+S+KILG+LYR+I+D ++ D SS
Sbjct: 957 FPKTGKIVTMPTVLKPKLYPDFMGKEEFQSYRSSKILGKLYRKIKDAYDEDYEGSS 1012
>gb|PIN21599.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
Length = 1204
Score = 1367 bits (3539), Expect = 0.0
Identities = 662/1020 (64%), Positives = 810/1020 (79%), Gaps = 2/1020 (0%)
Frame = +1
Query: 163 KKMESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEY 342
+ M S+ +D LIV Q+SVGG + VTAK LLDYF++N G+VWRCR+K SSTPPD+YP Y
Sbjct: 6 RTMGSEISDTDLIVTQISVGGLEKFVTAKMLLDYFEDNVGLVWRCRLKTSSTPPDSYPNY 65
Query: 343 DADLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYR 522
+ D +++++ N+Y KV+PHAFV F V N LEA P+NP+R
Sbjct: 66 EIDTERVQRKNEYVKVEPHAFVHFAVAGSANSALEAA-GRGDLILGRPLKVSLGPQNPHR 124
Query: 523 MNQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETP 702
+N+RR P ++ +V +E G++ PD F+VGW G + GVDFLVDPF+ +CK FTK+T
Sbjct: 125 LNERRRTTTPYKLSDVFVEIGVMRSPDEFIVGWSGPRRGVDFLVDPFNGTCKLHFTKDTA 184
Query: 703 FSFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDE 882
FSFKG AVI CNF +EFL R++N IK Y K++ V+V QLASSPL++YRTADD+
Sbjct: 185 FSFKGEARPAVINCNFMIEFLPREINEIKHY--KDFTSLVVIV-QLASSPLVYYRTADDD 241
Query: 883 IAITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHI 1062
I + P +LDDDDPWIRTTDFT SGAIGRCNTYRI +R R+ +AL +L +RV +
Sbjct: 242 IEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRNGSHLSKALGYLRNRRVTV 301
Query: 1063 EH--VKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERV 1236
+ +L+V +EP FG PM D F I +K+ I+FK +FLVN+VMH+ IINQHQ +E+
Sbjct: 302 LDGCPRQQLQVRDEPDFGMPMSDPFFCIQYKEGISFKIMFLVNAVMHKGIINQHQMSEKF 361
Query: 1237 FDLLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEV 1416
FDLLR QPEE+ ALK +YS+ +H + + F +L+ +Q+W LNNPK+LE+P E +D++EV
Sbjct: 362 FDLLRSQPEELTTVALKRMYSF-KHPVDDAFKALKNLQQWLLNNPKILERPREMDDIVEV 420
Query: 1417 RRLIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIV 1596
RRLIITP K YCLPPEVELSNRVLR+YR ++DRFLRVTFMDE M+TLN +VL+++ PIV
Sbjct: 421 RRLIITPAKAYCLPPEVELSNRVLRNYRNIADRFLRVTFMDEAMQTLNKNVLTYFVTPIV 480
Query: 1597 KDITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCK 1776
+DITS+ Q+TTMF+RVK IL+ G Y+CGR+YSFLAFSANQLRDRSAWFFAED+ I
Sbjct: 481 RDITSNSGPQRTTMFKRVKDILTNGFYLCGRKYSFLAFSANQLRDRSAWFFAEDKNIGVA 540
Query: 1777 QILSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKM 1956
I SWMGKF N+N+AKCAARMGQCFSSTYATVEVP EV+ KL DI RNDYVFSDGIG +
Sbjct: 541 TIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSTEVNSKLPDIERNDYVFSDGIGMI 600
Query: 1957 SPELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHT 2136
S +LA+EVAEKLQL+ PCAYQIRYAG KGVV WP K D +L LRPSM KFES HT
Sbjct: 601 SADLAMEVAEKLQLSTKPPCAYQIRYAGYKGVVAGWP-AKNDGFRLYLRPSMKKFESNHT 659
Query: 2137 ILEICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITA 2316
ILEICSWTR QPGFLNRQIITLLSAL+V+D+IFW MQ MV L+QML DTD+AFDV+TA
Sbjct: 660 ILEICSWTRFQPGFLNRQIITLLSALDVQDDIFWRMQETMVSRLDQMLEDTDMAFDVLTA 719
Query: 2317 SCAESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDE 2496
SC + GNTA+IML+AGFKP TEPHLRGML+SIR AQL DLREK+RIFV +GRWLMGCLDE
Sbjct: 720 SCTDQGNTAAIMLSAGFKPQTEPHLRGMLTSIRAAQLADLREKARIFVPNGRWLMGCLDE 779
Query: 2497 LAVLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLK 2676
L VLE GQCFIQVSNPS+E+CF KHGS F E+++ L VI+G V +AKNPCLHPGDVR+L+
Sbjct: 780 LGVLESGQCFIQVSNPSLEDCFVKHGSHFSESEKRLQVIKGLVAIAKNPCLHPGDVRILE 839
Query: 2677 AVNVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYT 2856
AV+VPGL HL DCL+FPQKG+RPHT+EASGSDLDGDLYFVTWDE+L+PPSK+SW PMEY
Sbjct: 840 AVDVPGLHHLYDCLIFPQKGERPHTNEASGSDLDGDLYFVTWDENLLPPSKRSWTPMEYA 899
Query: 2857 AAEAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAA 3036
E K+LPR+V+HSDII+FF KNMVN+ LG ICNAHVVHAD+S+ GALDEKCIKLAELAA
Sbjct: 900 PGEIKQLPREVKHSDIIEFFAKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAA 959
Query: 3037 IAVDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
AVDFPKTGKIV+MP +L+PK+YPDFMGKE+FQ+Y S+KILG+LYR++ D ++ D SS
Sbjct: 960 TAVDFPKTGKIVSMPADLKPKMYPDFMGKEEFQTYNSSKILGKLYRKVRDAYDKDYEASS 1019
>ref|XP_015885879.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885880.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885881.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885882.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
ref|XP_015885883.1| PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
Length = 1197
Score = 1350 bits (3495), Expect = 0.0
Identities = 646/1016 (63%), Positives = 806/1016 (79%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S N+K+++V QVS+GGFD V AK+L D+ ++ G+V+RCR+K SSTPP++YP+Y
Sbjct: 1 MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D I++ +DY+KV+PHAFV F + + +L+A PENPYR+N
Sbjct: 61 DTAAIERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRLN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR PI++ +V+++ G L D F + WRG GVDFLVDPFD +CKF FT++T FS
Sbjct: 121 QRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
FKG+ NHAVIKC+FK+EFLVRD+N K+Y Y VL+ QL S+P I+YRTADD+I
Sbjct: 181 FKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSY---LVLLLQLNSAPRIWYRTADDDID 237
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
+ P MLDDDDPWIRTTDFT SGAIGR N+YRI + R K ++A+ +L ++RVH +
Sbjct: 238 DSVPYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDS 297
Query: 1069 VKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDLL 1248
++ L++ +EP F PM D F IH+K+DI+F+T+FLVN+V+H+ I NQHQ ++ F+LL
Sbjct: 298 LRWPLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLL 357
Query: 1249 RGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRLI 1428
R Q +E+NVAALKHI SY R + L+VVQ+W L +PKL +KP +D+ EVRRL+
Sbjct: 358 RNQMKEVNVAALKHISSYKRPVF-DACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLV 416
Query: 1429 ITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDIT 1608
ITPT+ YCLPPEVELSNRVLR+Y+EV+DRFLRVTFMDEGM+T+N++VL+++ A IV++IT
Sbjct: 417 ITPTRAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREIT 476
Query: 1609 SSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQILS 1788
S+ QKT +F+R+K IL+ G Y+CGR+YSFLAFS+NQLRDRSAWFFAED+ I ++ S
Sbjct: 477 SNSFPQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKS 536
Query: 1789 WMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPEL 1968
WMG+F N+N+AKCAARMG CFSSTYA+VEVP +V+ DI RN Y FSDGIGK++P+L
Sbjct: 537 WMGRFTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDL 596
Query: 1969 ALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILEI 2148
ALEVA+KL+L N PCAYQIRYAG KGVV W D +LSLRPSM+KF+S HTILEI
Sbjct: 597 ALEVAQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEI 656
Query: 2149 CSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCAE 2328
CSWTR QPGFLNRQI+TLLSAL V DEIFW+MQ M+ LNQML+DTD+AFDV+TASCAE
Sbjct: 657 CSWTRFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAE 716
Query: 2329 SGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAVL 2508
GN A+IML+AGF P EPHLRGML+ IR AQL LREK+RIFV GRWLMGCLDEL VL
Sbjct: 717 QGNVAAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVL 776
Query: 2509 EQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVNV 2688
EQGQCFIQVSNPS+ENCF+KHGSRF E NL VI+G+VV+AKNPCLHPGDVR+L+AV+V
Sbjct: 777 EQGQCFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDV 836
Query: 2689 PGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAEA 2868
P L HL DCLVFPQKG+RPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM+Y AAE
Sbjct: 837 PDLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAET 896
Query: 2869 KELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAVD 3048
K+L R V DII+FF+KNMVN+ LGTICNAHVVHAD+S+ GALDEKC+KLA+LAA AVD
Sbjct: 897 KQLTRPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVD 956
Query: 3049 FPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
FPKTGKIV MP NL+PKLYPDFMGK+++QSYKSNKILG+LYR+I+D ++ D+T SS
Sbjct: 957 FPKTGKIVTMPFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASS 1012
>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 1347 bits (3485), Expect = 0.0
Identities = 650/1017 (63%), Positives = 796/1017 (78%), Gaps = 1/1017 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYD- 345
ME++G+ K+ +V QVS+GGFD VTAK+LL+Y + G+VWRCR+K S TPP++YP ++
Sbjct: 1 METEGSAKETVVTQVSIGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 346 ADLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
ADL +I + DY +V+PHAFV F +P+ ++A + PENP+ +
Sbjct: 61 ADLTKITRTEDYRRVEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
NQRR + P ++ +V +E G L D F VGWRG +GVDFLVDPFD +C+F F++ T F
Sbjct: 121 NQRRRKTTPFKLSDVDVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEI 885
SFK T HAVIKC+FKVEFLVRD+N IK+Y + VL+ QLAS+P ++YRTADD+I
Sbjct: 181 SFKSTAEHAVIKCDFKVEFLVRDINEIKQY---KETSCLVLLLQLASAPWVWYRTADDDI 237
Query: 886 AITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIE 1065
++ P +LDDDDPWIRTTDFT SGAIGRC++YR+ I R PK +A++FL+++RV E
Sbjct: 238 EVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEE 297
Query: 1066 HVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDL 1245
+++ +++ +EP FG PM D F IHHK+ I F LFLVN+VMH+ I NQHQ + FDL
Sbjct: 298 YLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDL 357
Query: 1246 LRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRL 1425
LR QP E+NVAALKHIY Y R + + L+V Q+W L NPKL + + +D+ E+RRL
Sbjct: 358 LRNQPTEVNVAALKHIYPYRRPVF-DAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRL 416
Query: 1426 IITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDI 1605
IITPTK YCLPPEVELSNRVLR Y++V+DRFLRVTFMDEG++T+N++ L+++ APIV+ I
Sbjct: 417 IITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAI 476
Query: 1606 TSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQIL 1785
TS QKT +F+RV+ IL++G Y+CGRRYSFLAFS+NQLRDRSAWFFAED I I
Sbjct: 477 TSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIK 536
Query: 1786 SWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPE 1965
SWMGKF NKNIAKCAARMGQCFSSTYAT+EVP EV+ L DI RN Y FSDGIG ++P+
Sbjct: 537 SWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPD 596
Query: 1966 LALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILE 2145
LA EVAEKL+ + P AYQIRYAGCKGVV WP++ GD I+LSLR SMNKF+S HTILE
Sbjct: 597 LAREVAEKLKFDFDPPSAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILE 655
Query: 2146 ICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCA 2325
ICSWTR QPGFLNRQIITLLSAL V D +FW MQ MV LNQMLVD+DVAFDV+TASCA
Sbjct: 656 ICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASCA 715
Query: 2326 ESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAV 2505
E GN A+IML+AGFKP EPHLRGML+ +R AQL LREK+RIFV GRWLMGCLDELAV
Sbjct: 716 ELGNVAAIMLSAGFKPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELAV 775
Query: 2506 LEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVN 2685
LEQGQCFIQVSN +ENCF KHGS+F ETKRNL V++G VV+AKNPCLHPGD+R+L+AV+
Sbjct: 776 LEQGQCFIQVSNSYLENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAVD 835
Query: 2686 VPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAE 2865
PGL HL DCLVFPQKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM+Y AAE
Sbjct: 836 DPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAE 895
Query: 2866 AKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAV 3045
AK+L R V H DII+FF KNM N+ LG ICNAHVV AD+S+ GALDEKC+ LAELAA AV
Sbjct: 896 AKQLTRPVNHQDIIEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAV 955
Query: 3046 DFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
DFPKTGKIV+MP +L+PK+YPDFMGKE+ QSYKS KILG LYRQI+D ++ D +S
Sbjct: 956 DFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAAS 1012
>gb|APR63701.1| SILENCING DEFECTIVE family protein 1 [Populus tomentosa]
Length = 1199
Score = 1343 bits (3476), Expect = 0.0
Identities = 644/1017 (63%), Positives = 791/1017 (77%), Gaps = 1/1017 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYD- 345
ME++G+ K+ +V QVS+GGFD VTAK+LL+Y + G+VWRCR+K S TPP++YP ++
Sbjct: 1 METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 346 ADLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
D+ +I + DY +V+PHAFV F +P ++A + PENP+ +
Sbjct: 61 TDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
NQRR + P ++ V +E G L D F VGWRG +GVDFLVDPFD +C+F F++ T F
Sbjct: 121 NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEI 885
SFK T HAVIKC+FKVEFLVRD+N IK+Y VL+ QLAS+P ++YRTADD+I
Sbjct: 181 SFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSC---LVLLLQLASAPRVWYRTADDDI 237
Query: 886 AITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIE 1065
++ P +LDDDDPWIRTTDFT SGAIGRC++YR+ I R PK +A++FL+++RV E
Sbjct: 238 EVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEE 297
Query: 1066 HVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDL 1245
+++ +++ +EP FG PM D F IHHK+ I F LFLVN+VMH+ I NQHQ + FDL
Sbjct: 298 YLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDL 357
Query: 1246 LRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRL 1425
LR QP E+NVAALKHIY Y R + + L+V Q+W L NPK + + +D+ E+RRL
Sbjct: 358 LRNQPTEVNVAALKHIYPYRRPVF-DAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRL 416
Query: 1426 IITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDI 1605
+ITPTK YCLPPEVELSNRVLR Y++V+DRFLRVTFMDEG++T+N++ L+++ APIV+ I
Sbjct: 417 VITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAI 476
Query: 1606 TSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQIL 1785
TS QKT +F+RV+ IL++G Y+CGRRYSFLAFS+NQLRDRSAWFFAED I I
Sbjct: 477 TSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIK 536
Query: 1786 SWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPE 1965
SWMGKF NKNIAKCAARMGQCFSSTYAT+EVP EV+ L DI RN Y FSDGIG ++P+
Sbjct: 537 SWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPD 596
Query: 1966 LALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILE 2145
LA EVAEKL+ + PCAYQIRYAGCKGVV WP++ GD I+LSLR SMNKF+S HTILE
Sbjct: 597 LAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILE 655
Query: 2146 ICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCA 2325
ICSWTR QPGFLNRQIITLLSAL V D +FW MQ MV LNQMLVD+DVAFDV+TASCA
Sbjct: 656 ICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCA 715
Query: 2326 ESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAV 2505
E GN A+IML+AGFKP EPHLRGML+ +R AQL LREK+RIFV GRWLMGCLDEL V
Sbjct: 716 EQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGV 775
Query: 2506 LEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVN 2685
LEQGQCFIQVSN +ENCF KHGS+F ETK+NL V++G VV+AKNPCLHPGD+R+L+AV+
Sbjct: 776 LEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVD 835
Query: 2686 VPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAE 2865
PGL HL DCLVFPQKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM+Y AAE
Sbjct: 836 APGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAE 895
Query: 2866 AKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAV 3045
AK+L R V H DI++FF KNM N+ LG ICNAHVV AD+S+ GALDEKC+ LAELAA AV
Sbjct: 896 AKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAV 955
Query: 3046 DFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
DFPKTGKIV+MP +L+PK+YPDFMGKE+ QSYKS KILG LYRQI+D ++ D +S
Sbjct: 956 DFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAAS 1012
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gb|PNT33711.1| hypothetical protein POPTR_006G253500v3 [Populus trichocarpa]
Length = 1198
Score = 1343 bits (3476), Expect = 0.0
Identities = 644/1017 (63%), Positives = 791/1017 (77%), Gaps = 1/1017 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYD- 345
ME++G+ K+ +V QVS+GGFD VTAK+LL+Y + G+VWRCR+K S TPP++YP ++
Sbjct: 1 METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 346 ADLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
D+ +I + DY +V+PHAFV F +P ++A + PENP+ +
Sbjct: 61 TDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
NQRR + P ++ V +E G L D F VGWRG +GVDFLVDPFD +C+F F++ T F
Sbjct: 121 NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEI 885
SFK T HAVIKC+FKVEFLVRD+N IK+Y VL+ QLAS+P ++YRTADD+I
Sbjct: 181 SFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSC---LVLLLQLASAPRVWYRTADDDI 237
Query: 886 AITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIE 1065
++ P +LDDDDPWIRTTDFT SGAIGRC++YR+ I R PK +A++FL+++RV E
Sbjct: 238 EVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEE 297
Query: 1066 HVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDL 1245
+++ +++ +EP FG PM D F IHHK+ I F LFLVN+VMH+ I NQHQ + FDL
Sbjct: 298 YLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDL 357
Query: 1246 LRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRL 1425
LR QP E+NVAALKHIY Y R + + L+V Q+W L NPK + + +D+ E+RRL
Sbjct: 358 LRNQPTEVNVAALKHIYPYRRPVF-DAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRL 416
Query: 1426 IITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDI 1605
+ITPTK YCLPPEVELSNRVLR Y++V+DRFLRVTFMDEG++T+N++ L+++ APIV+ I
Sbjct: 417 VITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAI 476
Query: 1606 TSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQIL 1785
TS QKT +F+RV+ IL++G Y+CGRRYSFLAFS+NQLRDRSAWFFAED I I
Sbjct: 477 TSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIK 536
Query: 1786 SWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPE 1965
SWMGKF NKNIAKCAARMGQCFSSTYAT+EVP EV+ L DI RN Y FSDGIG ++P+
Sbjct: 537 SWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPD 596
Query: 1966 LALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILE 2145
LA EVAEKL+ + PCAYQIRYAGCKGVV WP++ GD I+LSLR SMNKF+S HTILE
Sbjct: 597 LAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQ-GDGIRLSLRSSMNKFQSNHTILE 655
Query: 2146 ICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCA 2325
ICSWTR QPGFLNRQIITLLSAL V D +FW MQ MV LNQMLVD+DVAFDV+TASCA
Sbjct: 656 ICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCA 715
Query: 2326 ESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAV 2505
E GN A+IML+AGFKP EPHLRGML+ +R AQL LREK+RIFV GRWLMGCLDEL V
Sbjct: 716 EQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGV 775
Query: 2506 LEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVN 2685
LEQGQCFIQVSN +ENCF KHGS+F ETK+NL V++G VV+AKNPCLHPGD+R+L+AV+
Sbjct: 776 LEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVD 835
Query: 2686 VPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAE 2865
PGL HL DCLVFPQKG+RPH +EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM+Y AAE
Sbjct: 836 APGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAE 895
Query: 2866 AKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAV 3045
AK+L R V H DI++FF KNM N+ LG ICNAHVV AD+S+ GALDEKC+ LAELAA AV
Sbjct: 896 AKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAV 955
Query: 3046 DFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
DFPKTGKIV+MP +L+PK+YPDFMGKE+ QSYKS KILG LYRQI+D ++ D +S
Sbjct: 956 DFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAAS 1012
>ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 1343 bits (3475), Expect = 0.0
Identities = 659/1019 (64%), Positives = 804/1019 (78%), Gaps = 3/1019 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
MES+G++K ++V Q+S+GGFD VTA EL Y ++ G V RCR+K SSTPP++YP+++
Sbjct: 1 MESEGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIGSVDRCRLKTSSTPPESYPDFEI 60
Query: 349 -DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
D +I++ DY+KV+PHAFV FV P+ L+A PE P+ +
Sbjct: 61 IDTAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
NQRR P + +V LE G+L D + GWRG SGVDFLVDPFD +CKFLFTK+T F
Sbjct: 121 NQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEI 885
SFKG HAVIKCNFKVEFLVR++N +++ + +L+ QL+SSP ++YRTADD+I
Sbjct: 181 SFKGMPKHAVIKCNFKVEFLVREINEVRQ---RRDMSSLILLLQLSSSPFVYYRTADDDI 237
Query: 886 AITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHI- 1062
T P +LDDDDPWIRTTDFT SGAIGRCN+YRI I R K ++A+++L +RV++
Sbjct: 238 EETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVL 297
Query: 1063 -EHVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVF 1239
+ K +L+V +EP FG PM D F I HK+ I+F+ +FLVN+VMH+ IINQHQ +++ F
Sbjct: 298 EDSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFF 357
Query: 1240 DLLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVR 1419
DLLR Q ++IN+AALKHI SY RH + + + L++V KW L NPKLL+ P E +D++EVR
Sbjct: 358 DLLRSQQKDINIAALKHICSY-RHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVR 416
Query: 1420 RLIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVK 1599
RL+ITP+K YCLPPEVELSNRVLR+Y+EVSDRFLRVTFMDEGM+T+N +VL++Y APIVK
Sbjct: 417 RLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVK 476
Query: 1600 DITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQ 1779
ITS+ QKT +F+RVK IL+ G Y+CGR+YSFLAFS+NQLRDRSAWFFAED+K + +
Sbjct: 477 VITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRA 536
Query: 1780 ILSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMS 1959
I SWMGKF N+N+AKCAARMGQCFSSTYATVEVP EV +L DI RN Y FSDGIGK+
Sbjct: 537 IKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGIGKIV 595
Query: 1960 PELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTI 2139
P+LA+EVAEKL+L E P AYQIRYAGCKGVV WP D I+LS RPSMNKF S+HTI
Sbjct: 596 PDLAMEVAEKLKL-EGTPSAYQIRYAGCKGVVACWPSDN-DGIRLSWRPSMNKFLSDHTI 653
Query: 2140 LEICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITAS 2319
LEICSWTR QPGFLNRQI+TLLSAL V D+IFW MQ M+ LNQML DTDVAFDV+ AS
Sbjct: 654 LEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIAS 713
Query: 2320 CAESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDEL 2499
CAE GNTA+IML+AGFKP TEPHL+GML+ IR AQ LREK+RIFV GRWLMGCLDEL
Sbjct: 714 CAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDEL 773
Query: 2500 AVLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKA 2679
VLEQGQCFIQVS+PS+ENCF KHGSRF ++NL VI+G V +AKNPCLHPGDVR+L+A
Sbjct: 774 GVLEQGQCFIQVSSPSLENCFLKHGSRF-SAQKNLKVIKGIVAIAKNPCLHPGDVRILEA 832
Query: 2680 VNVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTA 2859
V+ PGLEHLVDCLVFPQKGDRPH++EASGSDLDGDLYFVTW+E LIPPSKQSW PM+Y +
Sbjct: 833 VDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDS 892
Query: 2860 AEAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAI 3039
AEAK L R+V DIIDFFTKNMVN+ LG ICNAHVVHAD S+ GALDE C+ LAE AA
Sbjct: 893 AEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAAT 952
Query: 3040 AVDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
AVDFPKTGK+V +PP L+PK+YPDFMGKE+FQ+Y+SNKILG++YRQI+D +N D++ SS
Sbjct: 953 AVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESS 1011
>ref|XP_011081567.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
ref|XP_020550370.1| RNA-dependent RNA polymerase 6 [Sesamum indicum]
Length = 1205
Score = 1342 bits (3473), Expect = 0.0
Identities = 654/1016 (64%), Positives = 792/1016 (77%), Gaps = 5/1016 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S+ D L+V Q+SVGG +N VTAK LLDYF++N G+VWRCR+K SSTPP++ P Y+
Sbjct: 5 MGSEIGDNDLVVTQISVGGLENYVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESNPNYEI 64
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D + +++ DY K++PHAFV F V L+A P+NPYRMN
Sbjct: 65 DAESVQRKTDYVKIEPHAFVHFAVAHSAKAALDAAARGELILGRKPLKVSLGPQNPYRMN 124
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
+RR P ++ +V++E G++ D F+VGWRG ++GVDFLVDPF+ +CK FT+ T FS
Sbjct: 125 ERRRTTTPYKLSDVLIEIGVMRSRDEFLVGWRGPRTGVDFLVDPFNGTCKLHFTRNTAFS 184
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
FKG AVIKCNFK+EFL R++N I +Y +++ VL+ QLASSPL++YRTADD+I
Sbjct: 185 FKGEARSAVIKCNFKIEFLPREINEINQY--RDFSSLIVLL-QLASSPLVYYRTADDDIE 241
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHI-- 1062
+ P +LDDDDPWIRTTDFT SGAIGRCNTYRI R R+ P +ALE+L K RV +
Sbjct: 242 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISARPRNGPSLFKALEYLRKLRVPVLD 301
Query: 1063 EHVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFD 1242
E L+V +EP FG PM D F + +K+ I+FK +FLVN+VMH+ IINQHQ +E+ FD
Sbjct: 302 ESPGRTLRVQDEPDFGMPMSDPFFCLQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFD 361
Query: 1243 LLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRR 1422
LLR QPEE+N+ ALKH+ SY R + +L+ VQKW LNNPKLLE+P E +DV+EVRR
Sbjct: 362 LLRSQPEELNIVALKHMCSYKRPVY-DAIKALDFVQKWLLNNPKLLERPREMDDVVEVRR 420
Query: 1423 LIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKD 1602
LIITP+K YCLPPEVELSNRVLR+Y+ ++DRFLRVTFMDE M+TLN +VL +Y +PIV+D
Sbjct: 421 LIITPSKAYCLPPEVELSNRVLRNYKNIADRFLRVTFMDEAMQTLNKNVLMYYASPIVRD 480
Query: 1603 ITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQI 1782
ITS+ Q+T MF+RVK IL G Y+CGR+Y+FLAFSANQLRDRSAWFFAED+ I
Sbjct: 481 ITSNSNPQRTNMFKRVKDILVNGFYLCGRKYTFLAFSANQLRDRSAWFFAEDKNTGVANI 540
Query: 1783 LSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSP 1962
SWMGKF +N+AKCAARMGQCFSSTYAT+EVP +V+ + D+ RN YVFSDGIG +S
Sbjct: 541 KSWMGKFTQRNVAKCAARMGQCFSSTYATIEVPLTKVNSQFPDVERNGYVFSDGIGMISA 600
Query: 1963 ELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTIL 2142
+LA+EVAEKLQL N PCAYQIRYAG KGVV WP K D ++L LR SM KFES H L
Sbjct: 601 DLAIEVAEKLQLGSNPPCAYQIRYAGYKGVVARWP-AKDDGVRLYLRRSMKKFESNHKTL 659
Query: 2143 EICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASC 2322
EICSWTR QPGFLNRQI+TLLSALEV+D+IFW MQ MV L+ ML D+D AFDV+TASC
Sbjct: 660 EICSWTRFQPGFLNRQIVTLLSALEVQDDIFWRMQETMVSRLDWMLEDSDTAFDVLTASC 719
Query: 2323 AESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKS---RIFVQDGRWLMGCLD 2493
+ GNTA++ML+AGF+P TEPHLRGML+SIR AQL DL E++ RIFV GRWLMGCLD
Sbjct: 720 TDQGNTAALMLSAGFRPQTEPHLRGMLTSIRAAQLGDLSERATIARIFVPLGRWLMGCLD 779
Query: 2494 ELAVLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVL 2673
EL LE GQCFIQVSNPSIE+CF KHGS+F ETK+ L V+ G V +AKNPCLHPGDVR+L
Sbjct: 780 ELGKLEHGQCFIQVSNPSIEDCFVKHGSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRIL 839
Query: 2674 KAVNVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEY 2853
+AV+VP L HL DCLVFPQKGDRPHT+EASGSDLDGDLYFVTWDE+LIPPSK+SW PMEY
Sbjct: 840 EAVDVPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEY 899
Query: 2854 TAAEAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELA 3033
E K+LPR+V+HSDIIDFFTKNMVN+ LG ICNAHVVHAD+S+ GALDEKCIKLAELA
Sbjct: 900 APGEVKQLPREVKHSDIIDFFTKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELA 959
Query: 3034 AIAVDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD 3201
A AVDFPKTGKIVNMP L+PK YPDFMGKE+FQSY S+KILG+LYR+I+D ++ D
Sbjct: 960 ATAVDFPKTGKIVNMPAELKPKTYPDFMGKEEFQSYNSSKILGKLYRKIKDAYDRD 1015
>ref|XP_021276585.1| RNA-dependent RNA polymerase 6 [Herrania umbratica]
Length = 1197
Score = 1341 bits (3470), Expect = 0.0
Identities = 648/1019 (63%), Positives = 797/1019 (78%), Gaps = 3/1019 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
MES G++K +V QVSVGGF VTAK+L++Y GVVWRCR+K S TPP++YP ++
Sbjct: 1 MESKGSEKDTVVTQVSVGGFGRHVTAKDLMEYLDNEVGVVWRCRLKTSWTPPESYPNFEI 60
Query: 349 -DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
D I++ +DY+KV+PHAFV F P V ++A PENPY +
Sbjct: 61 LDSTVIQRTDDYKKVEPHAFVHFASPLTVTWAVDAAGRTELVFNNQLLKVSLGPENPYYL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
N+RR P ++ +V L+ G + D F VGWRG GVDFLVDPFD +CKF F+++T F
Sbjct: 121 NRRRRNTTPFKLSDVCLDIGGMVSQDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLV--FQLASSPLIFYRTADD 879
SFKGT +AVIKC+FKVEFLVRD+N ++K+Y +P LV QLASSP ++YRTADD
Sbjct: 181 SFKGTTEYAVIKCDFKVEFLVRDIN-----EIKQYTEPSGLVVFLQLASSPWVWYRTADD 235
Query: 880 EIAITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVH 1059
EI + P +LDDDD WIRTTDFT SGAIGRCNTYR++IR R K ++AL++L +QRV
Sbjct: 236 EIEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVP 295
Query: 1060 IEHVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVF 1239
++V+ L++ +EP FG M D + I++K+ I F+ +FLVN+VMH+ I QHQ +E F
Sbjct: 296 PDYVRWPLRIRDEPDFGMSMSDPFYCINYKEGIPFEIMFLVNAVMHKGIFYQHQLSEDFF 355
Query: 1240 DLLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVR 1419
+LLR QP E+NVAALKHIYSY R + + L+ V W L NPKL + P + +D++E+R
Sbjct: 356 NLLRDQPREVNVAALKHIYSYRRPVF-DAYKRLKTVHDWLLRNPKLFKSPKQLDDIVEIR 414
Query: 1420 RLIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVK 1599
RL+ITPTK YCL PEVELSNRVLR Y+EV+DRFLRVTFMDEGM+T+N +VL++Y A IV+
Sbjct: 415 RLVITPTKAYCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVR 474
Query: 1600 DITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQ 1779
D+TS+ +QKT +F+RV+ IL+ G Y+CGR+YSFLAFSANQLRDRSAWFFAED K + Q
Sbjct: 475 DVTSTSFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDRSAWFFAEDGKTSVLQ 534
Query: 1780 ILSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMS 1959
IL WMGKF N+NIAKCAARMGQCFSSTYATVEVP EVD L DI RN Y+FSDGIGK++
Sbjct: 535 ILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVDPCLPDIERNGYLFSDGIGKIT 594
Query: 1960 PELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTI 2139
P+LA+EVA+KL+L N PCAYQIRYAGCKGVV WP++ GD ++LSLRPSMNKF S HT
Sbjct: 595 PDLAMEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRPSMNKFCSNHTT 653
Query: 2140 LEICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITAS 2319
LEICSWTR QPGFLNRQIITLLS L V D++FW+MQ MV LN++LVD D AF+V+T+S
Sbjct: 654 LEICSWTRFQPGFLNRQIITLLSTLHVPDDVFWEMQNTMVSKLNKILVDADAAFEVLTSS 713
Query: 2320 CAESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDEL 2499
CAE GNTA+IML+AGFKP EPHLRG+L+ +R +QL LREK+RIFV GRWLMG DEL
Sbjct: 714 CAEQGNTAAIMLSAGFKPQIEPHLRGILTCVRASQLSGLREKARIFVPSGRWLMGVFDEL 773
Query: 2500 AVLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKA 2679
VLEQGQCFIQV+NPS+ENCF KHGSRF ETK+N VI+G VV+AKNPCLHPGD+R+L+A
Sbjct: 774 GVLEQGQCFIQVANPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEA 833
Query: 2680 VNVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTA 2859
V+ PGL HL DCLVFPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SW PM+Y
Sbjct: 834 VDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDP 893
Query: 2860 AEAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAI 3039
E K+L R+V H DIIDFF KNMVN+ LGTICNAHVVHAD+S+ GALDEKCI LAELAA
Sbjct: 894 GEPKQLQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAAT 953
Query: 3040 AVDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
AVDFPKTG+IV+MP NL+PKLYPDFMGKE++QSYKS KILG LYR I+D ++ D++ SS
Sbjct: 954 AVDFPKTGRIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDAYDEDLSESS 1012
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 1340 bits (3469), Expect = 0.0
Identities = 652/1013 (64%), Positives = 800/1013 (78%), Gaps = 2/1013 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S+G++K L+V Q+SVGGFDN+V AK L +Y +E G VWRCR+K S+TPPD+YP YD
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDV 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D ++ ++ DYEKV PHAFV F + L A PENPYR+N
Sbjct: 61 DAARVHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYRLN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR MP + +V +E G+L D+FVVGWRG ++GVDF VDPF+ +CK LFTK+T FS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTAFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
F+G HA+IKCNFK+EF+VR++N IK++ K++ V++ QLASSPL+FYRTADD+I
Sbjct: 181 FRGEAKHAIIKCNFKIEFMVREINEIKKF--KDFTS-LVILLQLASSPLVFYRTADDDIE 237
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
+ +LDDDD WIRTTD T SGAIGRCNTYRI IR R+ P E+A+ + RV +
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297
Query: 1069 V--KTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFD 1242
+ + L+V +EP FG M D F + + I+FK +FLVN+V+H+ I+NQHQ T F
Sbjct: 298 MCNRKMLRVRDEPDFGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFY 356
Query: 1243 LLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRR 1422
LLR EE+N+AALKH++SY + + + L +QKW L NPKLLE+ E +D++EVRR
Sbjct: 357 LLRSHQEEVNLAALKHMFSY-KWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRR 415
Query: 1423 LIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKD 1602
L+ITPTK YCLPP VELSNRVLR+Y+ V+DRFLRVTFMDEGM LN +VL++Y A IV++
Sbjct: 416 LVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVRE 475
Query: 1603 ITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQI 1782
ITS+ Q+T +F+RVK ILS+G ++CGR+YSFLAFSANQLRDRSAWFFAED KI I
Sbjct: 476 ITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGI 535
Query: 1783 LSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSP 1962
+SWMG+F+N+N+AKCAARMGQCFSSTYATVEVP +EV+ +L DI RN YVFSDGIG +S
Sbjct: 536 ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595
Query: 1963 ELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTIL 2142
+LALEVAEKL L+ N P AYQIRYAGCKGVV WP K D I LSLRPSM KF+S HTIL
Sbjct: 596 DLALEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN-DGILLSLRPSMKKFDSNHTIL 654
Query: 2143 EICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASC 2322
EICSWTR QPGFLNRQI+TLLS+L+VKD IFW+MQ +M+ LN+MLVD+DVAFDVITASC
Sbjct: 655 EICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASC 714
Query: 2323 AESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELA 2502
AE+GNTA+IML+AGFKP +EPHLRGMLSSIR +QL DLR K+RIFV GRWLMGCLDEL
Sbjct: 715 AEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELG 774
Query: 2503 VLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAV 2682
LEQGQCFIQVS+PS+ENCF KHG +F + K+NL V++G VV+AKNPCLHPGDVR+L+AV
Sbjct: 775 ELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAV 834
Query: 2683 NVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAA 2862
+VPGL HL DCLVFPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y A
Sbjct: 835 DVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPA 894
Query: 2863 EAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIA 3042
E K+L R V H DIIDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+A
Sbjct: 895 EVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALA 954
Query: 3043 VDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD 3201
VDFPKTGK+V MP +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D +T+
Sbjct: 955 VDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTE 1007
>ref|XP_019260524.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana attenuata]
gb|OIT39130.1| rna-dependent rna polymerase 6 [Nicotiana attenuata]
Length = 1197
Score = 1339 bits (3466), Expect = 0.0
Identities = 650/1013 (64%), Positives = 803/1013 (79%), Gaps = 2/1013 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S+G++K L+V Q+SVGGFDN+V AK L +Y +E G VWRCR+K SSTPPD+YP +D
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D ++++++ DYEKV PHAFV F + L A PENPYR+N
Sbjct: 61 DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR MP + +V +E G+L D+FVVGWRG ++GVDFLVDPF+ +CK LFTK+T FS
Sbjct: 121 QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
F+G HA+IKCNFK+EFLVR++N IK+ K++ V++ QLASSPL+FYRTADD+I
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKK--CKDFTS-LVILLQLASSPLVFYRTADDDIE 237
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
+ +LDDDD WIRTTD T SGAIGRCNTYRI IR R+ P E+A+ + RV +
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297
Query: 1069 V--KTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFD 1242
+ + L+V +EP FG M D F + + I+FK +FLVN+V+H+ I+NQHQ T F
Sbjct: 298 MCNRKMLRVRDEPDFGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFY 356
Query: 1243 LLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRR 1422
LLR EE+N+AALKH++SY + + + L ++KW L NPKLLE+ E +D++EVRR
Sbjct: 357 LLRSHQEEVNLAALKHMFSY-KWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRR 415
Query: 1423 LIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKD 1602
L+ITPTK YCLPP VELSNRVLR+Y+ V+DRFLRVTFMDEGM LN +VL++Y A IV++
Sbjct: 416 LVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVRE 475
Query: 1603 ITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQI 1782
ITS+ Q+T +F+RVK ILS+G ++CGR+YSFLAFSANQLRDRSAWFFAED KI I
Sbjct: 476 ITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGI 535
Query: 1783 LSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSP 1962
+SWMG+F+N+N+AKCAARMGQCFSSTYATVEVP +EV+ +L DI RN YVFSDGIG +S
Sbjct: 536 ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595
Query: 1963 ELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTIL 2142
+LA+EVAEKL L+ N P AYQIRYAGCKGVV WP K D I+LSLRPSM KF+S HTIL
Sbjct: 596 DLAVEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTIL 654
Query: 2143 EICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASC 2322
EICSWTR QPGFLNRQI+TLLS+L+VKD IFW+MQ +M+ L++MLVD+DVAFDVITASC
Sbjct: 655 EICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASC 714
Query: 2323 AESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELA 2502
AE+GNTA+IML+AGFKP +EPHLRGMLSSIR +QL DLR K+RIFV GRWLMGCLDEL
Sbjct: 715 AEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELG 774
Query: 2503 VLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAV 2682
LEQGQCFIQVS+PS+ENCF KHG +F + K+NL V++G VV+AKNPCLHPGDVR+L+AV
Sbjct: 775 ELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAV 834
Query: 2683 NVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAA 2862
+VPGL HL DCLVFPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y A
Sbjct: 835 DVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPA 894
Query: 2863 EAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIA 3042
E K++ R V H DIIDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+A
Sbjct: 895 EVKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALA 954
Query: 3043 VDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD 3201
VDFPKTGK+V MP +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D +T+
Sbjct: 955 VDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTE 1007
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 1339 bits (3466), Expect = 0.0
Identities = 650/1013 (64%), Positives = 803/1013 (79%), Gaps = 2/1013 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S+G++K L+V Q+SVGGFDN+V AK L +Y +E G VWRCR+K SSTPPD+YP +D
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D ++++++ DYEKV PHAFV F + L A PENPYR+N
Sbjct: 61 DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR MP + +V +E G+L D+FVVGWRG ++GVDFLVDPF+ +CK LFTK+T FS
Sbjct: 121 QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
F+G HA+IKCNFK+EFLVR++N IK+ K++ V++ QLASSPL+FYRTADD+I
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKK--CKDFTS-LVILLQLASSPLVFYRTADDDIE 237
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
+ +LDDDD WIRTTD T SGAIGRCNTYRI IR R+ P E+A+ + RV +
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297
Query: 1069 V--KTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFD 1242
+ + L+V +EP FG M D F + + I+FK +FLVN+V+H+ I+NQHQ T F
Sbjct: 298 MCNRKMLRVRDEPDFGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFY 356
Query: 1243 LLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRR 1422
LLR EE+N+AALKH++SY + + + L ++KW L NPKLLE+ E +D++EVRR
Sbjct: 357 LLRSHQEEVNLAALKHMFSY-KWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRR 415
Query: 1423 LIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKD 1602
L+ITPTK YCLPP VELSNRVLR+Y+ V+DRFLRVTFMDEGM LN +VL++Y A IV++
Sbjct: 416 LVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVRE 475
Query: 1603 ITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQI 1782
ITS+ Q+T +F+RVK ILS+G ++CGR+YSFLAFSANQLRDRSAWFFAED KI I
Sbjct: 476 ITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGI 535
Query: 1783 LSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSP 1962
+SWMG+F+N+N+AKCAARMGQCFSSTYATVEVP +EV+ +L DI RN YVFSDGIG +S
Sbjct: 536 ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595
Query: 1963 ELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTIL 2142
+LA+EVAEKL L+ N P AYQIRYAGCKGVV WP K D I+LSLRPSM KF+S HTIL
Sbjct: 596 DLAVEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTIL 654
Query: 2143 EICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASC 2322
EICSWTR QPGFLNRQI+TLLS+L+VKD IFW+MQ +M+ L++MLVD+DVAFDVITASC
Sbjct: 655 EICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASC 714
Query: 2323 AESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELA 2502
AE+GNTA+IML+AGFKP +EPHLRGMLSSIR +QL DLR K+RIFV GRWLMGCLDEL
Sbjct: 715 AEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELG 774
Query: 2503 VLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAV 2682
LEQGQCFIQVS+PS+ENCF KHG +F + K+NL V++G VV+AKNPCLHPGDVR+L+AV
Sbjct: 775 ELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAV 834
Query: 2683 NVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAA 2862
+VPGL HL DCLVFPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y A
Sbjct: 835 DVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPA 894
Query: 2863 EAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIA 3042
E K++ R V H DIIDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+A
Sbjct: 895 EVKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALA 954
Query: 3043 VDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD 3201
VDFPKTGK+V MP +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D +T+
Sbjct: 955 VDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTE 1007
>ref|XP_017983705.1| PREDICTED: RNA-dependent RNA polymerase 6 [Theobroma cacao]
Length = 1197
Score = 1338 bits (3464), Expect = 0.0
Identities = 649/1019 (63%), Positives = 797/1019 (78%), Gaps = 3/1019 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
MES G++K +V QVSVGGF V AK+L++YF GVVWRCR+K S TPP++YP ++
Sbjct: 1 MESQGSEKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEI 60
Query: 349 -DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
D I++ +DY+KV+PHAFV F P ++A PENPY +
Sbjct: 61 LDSTVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
N+RR P ++ +V L+ G + D F VGWRG GVDFLVDPFD +CKF F+++T F
Sbjct: 121 NRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLV--FQLASSPLIFYRTADD 879
SFKGT +AVIKC+FKVEFLVRD+N ++K+Y +P LV QLASSP ++YRTADD
Sbjct: 181 SFKGTTEYAVIKCDFKVEFLVRDIN-----EIKQYTEPSGLVVFLQLASSPRVWYRTADD 235
Query: 880 EIAITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVH 1059
EI + P +LDDDD WIRTTDFT SGAIGRCNTYR++IR R K ++AL++L +QRV
Sbjct: 236 EIEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVP 295
Query: 1060 IEHVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVF 1239
+++V+ L++ +EP FG M D + I +K+ I F+ +FLVN+VMH+ I NQHQ +E F
Sbjct: 296 MDYVRWPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFF 355
Query: 1240 DLLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVR 1419
+LLR QP E+NVAALKHIYSY R + + L+ V W L NP L + P + +D++E+R
Sbjct: 356 NLLRDQPREVNVAALKHIYSYRRPVF-DAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIR 414
Query: 1420 RLIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVK 1599
RL+ITPTK +CL PEVELSNRVLR Y+EV+DRFLRVTFMDEGM+T+N +VL++Y A IV+
Sbjct: 415 RLVITPTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVR 474
Query: 1600 DITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQ 1779
D+TS+F +QKT +F+RV+ IL+ G Y+CGR+YSFLAFSANQLRD SAWFFAED K + Q
Sbjct: 475 DVTSTFFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQ 534
Query: 1780 ILSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMS 1959
IL WMGKF N+NIAKCAARMGQCFSSTYATVEVP EV+ L DI RN YVFSDGIGK++
Sbjct: 535 ILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKIT 594
Query: 1960 PELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTI 2139
P+LA EVA+KL+L N PCAYQIRYAGCKGVV WP++ GD ++LSLR SMNKF S+HT
Sbjct: 595 PDLAKEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRCSMNKFFSDHTT 653
Query: 2140 LEICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITAS 2319
LEICSWTR QPGFLNRQIITLLS V DE+FW+MQ MV LN++LVDTDVAF+V+T+S
Sbjct: 654 LEICSWTRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSS 713
Query: 2320 CAESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDEL 2499
C+E GN A+IML+AGFKP TEPHLRG+L+ +R +QL LREK+RIFV GRWLMG LDEL
Sbjct: 714 CSEQGNAAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDEL 773
Query: 2500 AVLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKA 2679
VLEQGQCFIQVSNPS+ENCF KHGSRF ETK+N VI+G VV+AKNPCLHPGD+R+L+A
Sbjct: 774 GVLEQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEA 833
Query: 2680 VNVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTA 2859
V+ PGL HL DCLVFPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SW PM+Y
Sbjct: 834 VDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDP 893
Query: 2860 AEAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAI 3039
E KE+ R+V H DIIDFF KNMVN+ LGTICNAHVVHAD+S+ GALDEKCI LAELAA
Sbjct: 894 GETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAAT 953
Query: 3040 AVDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
AVDFPKTGKIV+MP NL+PKLYPDFMGKE++QSYKS KILG LYR I+D ++ D++ SS
Sbjct: 954 AVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDAYDEDLSESS 1012
>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
Length = 1197
Score = 1338 bits (3463), Expect = 0.0
Identities = 649/1019 (63%), Positives = 797/1019 (78%), Gaps = 3/1019 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
MES G++K +V QVSVGGF V AK+L++YF GVVWRCR+K S TPP++YP ++
Sbjct: 1 MESQGSEKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCRLKTSWTPPESYPNFEI 60
Query: 349 -DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
D I++ +DY+KV+PHAFV F P ++A PENPY +
Sbjct: 61 LDSTVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
N+RR P ++ +V L+ G + D F VGWRG GVDFLVDPFD +CKF F+++T F
Sbjct: 121 NRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLV--FQLASSPLIFYRTADD 879
SFKGT +AVIKC+FKVEFLVRD+N ++K+Y +P LV QLASSP ++YRTADD
Sbjct: 181 SFKGTTEYAVIKCDFKVEFLVRDIN-----EIKQYTEPSGLVVFLQLASSPRVWYRTADD 235
Query: 880 EIAITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVH 1059
EI + P +LDDDD WIRTTDFT SGAIGRCNTYR++IR R K ++AL++L +QRV
Sbjct: 236 EIEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVP 295
Query: 1060 IEHVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVF 1239
+++V+ L++ +EP FG M D + I +K+ I F+ +FLVN+VMH+ I NQHQ +E F
Sbjct: 296 MDYVRWPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFF 355
Query: 1240 DLLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVR 1419
+LLR QP E+NVAALKHIYSY R + + L+ V W L NP L + P + +D++E+R
Sbjct: 356 NLLRDQPREVNVAALKHIYSYRRPVF-DAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIR 414
Query: 1420 RLIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVK 1599
RL+ITPTK +CL PEVELSNRVLR Y+EV+DRFLRVTFMDEGM+T+N +VL++Y A IV+
Sbjct: 415 RLVITPTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVR 474
Query: 1600 DITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQ 1779
D+TS+F +QKT +F+RV+ IL+ G Y+CGR+YSFLAFSANQLRD SAWFFAED K + Q
Sbjct: 475 DVTSTFFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQ 534
Query: 1780 ILSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMS 1959
IL WMGKF N+NIAKCAARMGQCFSSTYATVEVP EV+ L DI RN YVFSDGIGK++
Sbjct: 535 ILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKIT 594
Query: 1960 PELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTI 2139
P+LA EVA+KL+L N PCAYQIRYAGCKGVV WP++ GD ++LSLR SMNKF S+HT
Sbjct: 595 PDLAKEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEE-GDGVRLSLRCSMNKFFSDHTT 653
Query: 2140 LEICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITAS 2319
LEICSWTR QPGFLNRQIITLLS V DE+FW+MQ MV LN++LVDTDVAF+V+T+S
Sbjct: 654 LEICSWTRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSS 713
Query: 2320 CAESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDEL 2499
C+E GN A+IML+AGFKP TEPHLRG+L+ +R +QL LREK+RIFV GRWLMG LDEL
Sbjct: 714 CSEQGNAAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDEL 773
Query: 2500 AVLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKA 2679
VLEQGQCFIQVSNPS+ENCF KHGSRF ETK+N VI+G VV+AKNPCLHPGD+R+L+A
Sbjct: 774 GVLEQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEA 833
Query: 2680 VNVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTA 2859
V+ PGL HL DCLVFPQKG+RPHT+EASGSDLDGDLYFVTW++ LIPP K+SW PM+Y
Sbjct: 834 VDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDP 893
Query: 2860 AEAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAI 3039
E KE+ R+V H DIIDFF KNMVN+ LGTICNAHVVHAD+S+ GALDEKCI LAELAA
Sbjct: 894 GETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAAT 953
Query: 3040 AVDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
AVDFPKTGKIV+MP NL+PKLYPDFMGKE++QSYKS KILG LYR I+D ++ D++ SS
Sbjct: 954 AVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESS 1012
>ref|XP_016477231.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1338 bits (3462), Expect = 0.0
Identities = 649/1013 (64%), Positives = 802/1013 (79%), Gaps = 2/1013 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S+G++K L+V Q+SVGGFDN+V AK L +Y +E G VWRCR+K S+TPPD+YP YD
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D +++ ++ DYEKV PHAFV F + L A PENPYR+N
Sbjct: 61 DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR MP R +V +E G+L D+FVVGWRG ++GVDF VDPF+ +C+ LFTK+T FS
Sbjct: 121 QRRRTTMPFRFSDVSVELGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACRILFTKDTAFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
F+G HA+IKCNFK+EF+VR++N IK+ K++ V++ QLASSPL+FYRTADD+I
Sbjct: 181 FRGEARHAIIKCNFKIEFMVREINEIKK--CKDFTS-LVILLQLASSPLVFYRTADDDIE 237
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
+ +LDDDD WIRTTD T SGAIGRCNTYRI IR R+ P E+A+ + +RV +
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVE 297
Query: 1069 V--KTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFD 1242
+ + L+V +EP FG M D F + + I+FK +FLVN+V+H+ I+NQHQ T F
Sbjct: 298 MCNRKMLRVRDEPDFGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFY 356
Query: 1243 LLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRR 1422
LLR + EE+N+AALKH++SY + + + L +QKW L NPKLLE+ E +D++EVRR
Sbjct: 357 LLRSRQEEVNLAALKHMFSY-KWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRR 415
Query: 1423 LIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKD 1602
L+ITPTK YCLPP VELSNRVLR+Y+ V+DRFLRVTFMDEGM LN +VL++Y A IV++
Sbjct: 416 LVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVRE 475
Query: 1603 ITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQI 1782
ITS+ Q+T +F+RVK ILS+G ++CGR+YSFLAFSANQLRDRSAWFFAED KI I
Sbjct: 476 ITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGI 535
Query: 1783 LSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSP 1962
+SWMG+F+N+N+AKCAARMGQCFSSTYATVEVP EV+ +L DI RN YVFSDGIG +S
Sbjct: 536 ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISA 595
Query: 1963 ELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTIL 2142
+LA+EVAEKL L+ N P AYQIRYAGCKGVV WP K D I+LSLRPSM KF+S HTIL
Sbjct: 596 DLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTIL 654
Query: 2143 EICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASC 2322
EICSWTR QPGFLNRQI+TLLS+L+VKD IFW+MQ +M+ L++MLVD+DVAFDVITASC
Sbjct: 655 EICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASC 714
Query: 2323 AESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELA 2502
AE+GNTA++ML+AGFKP +EPHLRGMLSSIR +QL DLR K+RIFV GRWLMGCLDEL
Sbjct: 715 AEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELG 774
Query: 2503 VLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAV 2682
LEQGQCFIQVS+PS+ENCF KHG +F + K+NL V++G VV+AKNPCLHPGDVR+L+AV
Sbjct: 775 ELEQGQCFIQVSSPSLENCFIKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAV 834
Query: 2683 NVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAA 2862
+VPGL HL DCLVFPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y A
Sbjct: 835 DVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPA 894
Query: 2863 EAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIA 3042
E K+L R V H DIIDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+A
Sbjct: 895 EVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALA 954
Query: 3043 VDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD 3201
VDFPKTGK+V MP +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D +T+
Sbjct: 955 VDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTE 1007
>ref|XP_009758053.1| PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
Length = 1197
Score = 1337 bits (3461), Expect = 0.0
Identities = 649/1013 (64%), Positives = 801/1013 (79%), Gaps = 2/1013 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYDA 348
M S+G++K L+V Q+SVGGFDN+V AK L +Y +E G VWRCR+K S+TPPD+YP YD
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60
Query: 349 DLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRMN 528
D +++ ++ DYEKV PHAFV F + L A PENPYR+N
Sbjct: 61 DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 529 QRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPFS 708
QRR MP R +V +E G+L D+FVVGWRG ++GVDF VDPF+ +C+ LFTK+T FS
Sbjct: 121 QRRRTTMPFRFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACRILFTKDTAFS 180
Query: 709 FKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEIA 888
F+G HA+IKCNFK+EF+VR++N IK+ K++ V++ QLASSPL+FYRTADD+I
Sbjct: 181 FRGEARHAIIKCNFKIEFMVREINEIKK--CKDFTS-LVILLQLASSPLVFYRTADDDIE 237
Query: 889 ITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIEH 1068
+ +LDDDD WIRTTD T SGAIGRCNTYRI IR R+ P E+A+ + RV +
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297
Query: 1069 V--KTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFD 1242
+ + L+V +EP FG M D F + + I+FK +FLVN+V+H+ I+NQHQ T F
Sbjct: 298 MCNRKMLRVRDEPDFGVSMSDPFFCFQN-EGISFKVMFLVNAVLHKGIVNQHQMTNEFFY 356
Query: 1243 LLRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRR 1422
LLR + EE+N+AALKH++SY + + + L +QKW + NPKLLE+ E +D++EVRR
Sbjct: 357 LLRSRQEEVNLAALKHMFSY-KWPVNDAIQKLVGIQKWLMKNPKLLERTGELDDIVEVRR 415
Query: 1423 LIITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKD 1602
L+ITPTK YCLPP VELSNRVLR+Y+ V+DRFLRVTFMDEGM LN +VL++Y A IV++
Sbjct: 416 LVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVRE 475
Query: 1603 ITSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQI 1782
ITS+ Q+T +F+RVK ILS+G ++CGR+YSFLAFSANQLRDRSAWFFAED KI I
Sbjct: 476 ITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGI 535
Query: 1783 LSWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSP 1962
+SWMG+F+N+N+AKCAARMGQCFSSTYATVEVP EV+ +L DI RN YVFSDGIG +S
Sbjct: 536 ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISA 595
Query: 1963 ELALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTIL 2142
+LA+EVAEKL L+ N P AYQIRYAGCKGVV WP K D I+LSLRPSM KF+S HTIL
Sbjct: 596 DLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKN-DGIRLSLRPSMKKFDSNHTIL 654
Query: 2143 EICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASC 2322
EICSWTR QPGFLNRQI+TLLS+L+VKD IFW+MQ +M+ L++MLVD+DVAFDVITASC
Sbjct: 655 EICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASC 714
Query: 2323 AESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELA 2502
AE+GNTA+IML+AGFKP +EPHLRGMLSSIR +QL DLR K+RIFV GRWLMGCLDEL
Sbjct: 715 AEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELG 774
Query: 2503 VLEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAV 2682
LEQGQCFIQVS+PS+ENCF KHG +F + K+NL V++G VV+AKNPCLHPGDVR+L+AV
Sbjct: 775 ELEQGQCFIQVSSPSLENCFIKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAV 834
Query: 2683 NVPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAA 2862
+VPGL HL DCLVFPQKGDRPH++EASGSDLDGDLYFVTWDE+LIPPSK+SW+PM Y A
Sbjct: 835 DVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPA 894
Query: 2863 EAKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIA 3042
E K+L R V H DIIDFF+KNMV + LG ICNAHVVHAD+S+ GALDEKC+KLAELAA+A
Sbjct: 895 EVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALA 954
Query: 3043 VDFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTD 3201
VDFPKTGK+V MP +L+PK+YPDFMGKE+FQSYKS KILG+LYRQ++D +T+
Sbjct: 955 VDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTE 1007
>ref|XP_012071453.1| RNA-dependent RNA polymerase 6 isoform X1 [Jatropha curcas]
ref|XP_020534693.1| RNA-dependent RNA polymerase 6 isoform X2 [Jatropha curcas]
gb|KDP38635.1| hypothetical protein JCGZ_03988 [Jatropha curcas]
Length = 1198
Score = 1337 bits (3461), Expect = 0.0
Identities = 650/1017 (63%), Positives = 783/1017 (76%), Gaps = 1/1017 (0%)
Frame = +1
Query: 169 MESDGNDKKLIVNQVSVGGFDNEVTAKELLDYFQENFGVVWRCRVKKSSTPPDTYPEYD- 345
M ++ ++K +V QVS GGF+N V AK+L+ Y +E G VWRCR+K S TPP++YP +
Sbjct: 1 MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKI 60
Query: 346 ADLDQIKKVNDYEKVKPHAFVQFVVPDQVNMVLEAEEXXXXXXXXXXXXXXXXPENPYRM 525
D I + N+Y++V+PHAFV F + + A PENP+ +
Sbjct: 61 TDTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTL 120
Query: 526 NQRREEEMPIRIENVILEAGLLSDPDNFVVGWRGAKSGVDFLVDPFDYSCKFLFTKETPF 705
NQRR + +P ++ +V +E G++ D F+VGWRG SGVDFLVDPFD +CKF FT++T F
Sbjct: 121 NQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAF 180
Query: 706 SFKGTKNHAVIKCNFKVEFLVRDVNVIKEYDVKEYDDPKVLVFQLASSPLIFYRTADDEI 885
S K T HAVI+C+FK+EFLVRD+N IK+Y Y V++ QLAS+P ++YRTADD+I
Sbjct: 181 SIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSY---LVILLQLASAPWVWYRTADDDI 237
Query: 886 AITHPSQMLDDDDPWIRTTDFTQSGAIGRCNTYRIMIRIRDVPKAERALEFLEKQRVHIE 1065
+ P +LDDDDPWIRTTDFT SGAIGRCN+YR+ I R K ERA+ +L+++RV ++
Sbjct: 238 EVLVPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVD 297
Query: 1066 HVKTKLKVLEEPGFGTPMQDDIFSIHHKDDINFKTLFLVNSVMHRCIINQHQFTERVFDL 1245
++ LK+L EP +G PM D F IH K+ I F+ +FLVN+VMH+ I NQHQ ++ FDL
Sbjct: 298 SLRRPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDL 357
Query: 1246 LRGQPEEINVAALKHIYSYYRHTLPNGFTSLEVVQKWFLNNPKLLEKPLEQNDVIEVRRL 1425
LR QP +INVAALKHI SY R + L+ VQ+W L NPKL + P + +D++++RRL
Sbjct: 358 LRNQPADINVAALKHICSYKRPVF-DAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRL 416
Query: 1426 IITPTKGYCLPPEVELSNRVLRHYREVSDRFLRVTFMDEGMETLNNHVLSFYPAPIVKDI 1605
ITPT+ YCLPPE+ELSNRVLR Y+ +DRFLRVTFMDEG++T+N + L++Y APIV+DI
Sbjct: 417 AITPTRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDI 476
Query: 1606 TSSFIAQKTTMFRRVKHILSQGIYVCGRRYSFLAFSANQLRDRSAWFFAEDEKITCKQIL 1785
TS+ +QKT +F+RVK IL+ G Y+CGRRYSFLAFS+NQLRDRSAWFFAED KI QI
Sbjct: 477 TSTSFSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIR 536
Query: 1786 SWMGKFNNKNIAKCAARMGQCFSSTYATVEVPRNEVDLKLEDIVRNDYVFSDGIGKMSPE 1965
WMGKF NKNIAKCAARMGQCFSSTYATVEVP EV+L DI RN Y FSDGIG ++P+
Sbjct: 537 KWMGKFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPD 596
Query: 1966 LALEVAEKLQLTENQPCAYQIRYAGCKGVVVWWPDKKGDNIKLSLRPSMNKFESEHTILE 2145
LA VAEKL+L N PCAYQIRYAGCKGVV WP +GD I+LSLRPSMNKF+S HT LE
Sbjct: 597 LAKAVAEKLKLDINPPCAYQIRYAGCKGVVACWP-AQGDGIRLSLRPSMNKFQSNHTTLE 655
Query: 2146 ICSWTRLQPGFLNRQIITLLSALEVKDEIFWDMQMKMVMNLNQMLVDTDVAFDVITASCA 2325
ICSWTR QPGFLNRQIITLLS L V DEIFW MQ+ MV LN+ML D DVAFDVITASC
Sbjct: 656 ICSWTRFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCT 715
Query: 2326 ESGNTASIMLAAGFKPHTEPHLRGMLSSIRVAQLKDLREKSRIFVQDGRWLMGCLDELAV 2505
E GNTA++ML+AGFKP EPHLRGML+ IR AQ DLREK+RIFV GRWLMGCLDEL V
Sbjct: 716 EQGNTAALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGV 775
Query: 2506 LEQGQCFIQVSNPSIENCFAKHGSRFLETKRNLTVIEGYVVVAKNPCLHPGDVRVLKAVN 2685
LEQGQCFIQVSNPS+E CF+KHGSRF ETK+NL VI G VV+AKNPCLHPGDVR+L+AV+
Sbjct: 776 LEQGQCFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVD 835
Query: 2686 VPGLEHLVDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDEHLIPPSKQSWLPMEYTAAE 2865
PGL HL DCLVFPQKGDRPHT+EASGSDLDGDLYFVTWDE+LIPPSKQSW PM+Y AAE
Sbjct: 836 APGLCHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAE 895
Query: 2866 AKELPRDVRHSDIIDFFTKNMVNDRLGTICNAHVVHADMSDCGALDEKCIKLAELAAIAV 3045
K L R V H DIIDFF KNMVN+ LG ICNAHVV AD+S+ GALDE CIKLAELAA AV
Sbjct: 896 PKLLSRPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAV 955
Query: 3046 DFPKTGKIVNMPPNLRPKLYPDFMGKEDFQSYKSNKILGELYRQIEDCFNTDITPSS 3216
DFPKTGK+V +P L+PK+YPDFMGKE++QSYKS KILG LYR I+D + D +S
Sbjct: 956 DFPKTGKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAAS 1012