BLASTX nr result

ID: Chrysanthemum21_contig00012347 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00012347
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI04625.1| DNA-binding WRKY [Cynara cardunculus var. scolymus]     73   1e-12
ref|XP_023728676.1| probable WRKY transcription factor 30 isofor...    60   4e-08
ref|XP_023728670.1| probable WRKY transcription factor 30 isofor...    60   4e-08

>gb|KVI04625.1| DNA-binding WRKY [Cynara cardunculus var. scolymus]
          Length = 344

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 23/122 (18%)
 Frame = +1

Query: 1   QVVQSPETLLKFQKSPMAMLENLETHSFHFPSTSNKLFNLPPVDDIHDDPTA-------- 156
           Q  + PE LL  Q       EN++T SF FPSTSN     P +D+  D  T+        
Sbjct: 216 QAPRCPEFLLDLQTCDKPTTENIKTSSFQFPSTSNNSIIFPTLDNAFDSNTSPSFISPTT 275

Query: 157 ---------------CRSISNAMNVESELHCVVSAAAISPTSSQNVDVGFRFGELDFGNS 291
                           R+IS+ +  +SE++ VVS A  S TSS NVDVGF+FG+++FGN 
Sbjct: 276 SVPAYFTMSQPRVSVVRNISSPVAAKSEVNNVVSVAT-SSTSSHNVDVGFQFGQMEFGND 334

Query: 292 FN 297
           F+
Sbjct: 335 FS 336


>ref|XP_023728676.1| probable WRKY transcription factor 30 isoform X2 [Lactuca sativa]
          Length = 348

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 24/123 (19%)
 Frame = +1

Query: 1   QVVQSPETLLKFQKSPMAMLENLETH-SFHFPSTSNKLFNLPPVDDIHDD--------PT 153
           Q++ SP+ L   Q    A+ +NLETH S HFPSTSN  F  P  +   D         PT
Sbjct: 222 QLLGSPKIL---QTDRKAITKNLETHYSAHFPSTSNNNFVFPTPNSTSDGNETPSFITPT 278

Query: 154 A---------------CRSISNAMNVESELHCVVSAAAISPTSSQNVDVGFRFGELDFGN 288
                           C    N + VESEL+ +VSAA  S TS  N D+   FGEL+FG+
Sbjct: 279 TLGSTYFMMSQPQVSMCEINENIVGVESELNDIVSAAT-SSTSFHNADLPLPFGELEFGS 337

Query: 289 SFN 297
           +F+
Sbjct: 338 TFS 340


>ref|XP_023728670.1| probable WRKY transcription factor 30 isoform X1 [Lactuca sativa]
 gb|PLY97698.1| hypothetical protein LSAT_8X6060 [Lactuca sativa]
          Length = 352

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 24/123 (19%)
 Frame = +1

Query: 1   QVVQSPETLLKFQKSPMAMLENLETH-SFHFPSTSNKLFNLPPVDDIHDD--------PT 153
           Q++ SP+ L   Q    A+ +NLETH S HFPSTSN  F  P  +   D         PT
Sbjct: 226 QLLGSPKIL---QTDRKAITKNLETHYSAHFPSTSNNNFVFPTPNSTSDGNETPSFITPT 282

Query: 154 A---------------CRSISNAMNVESELHCVVSAAAISPTSSQNVDVGFRFGELDFGN 288
                           C    N + VESEL+ +VSAA  S TS  N D+   FGEL+FG+
Sbjct: 283 TLGSTYFMMSQPQVSMCEINENIVGVESELNDIVSAAT-SSTSFHNADLPLPFGELEFGS 341

Query: 289 SFN 297
           +F+
Sbjct: 342 TFS 344


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