BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00011986
         (1153 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021988537.1| pre-mRNA-processing protein 40A isoform X4 [...   191   3e-50
ref|XP_021988536.1| pre-mRNA-processing protein 40A isoform X3 [...   191   3e-50
ref|XP_021988535.1| pre-mRNA-processing protein 40A isoform X2 [...   191   3e-50
ref|XP_021988534.1| pre-mRNA-processing protein 40A isoform X1 [...   191   3e-50
ref|XP_023746549.1| pre-mRNA-processing protein 40A isoform X4 [...   180   1e-46
ref|XP_023746548.1| pre-mRNA-processing protein 40A isoform X3 [...   180   3e-46
ref|XP_023746547.1| pre-mRNA-processing protein 40A isoform X2 [...   180   3e-46
ref|XP_023746546.1| pre-mRNA-processing protein 40A isoform X1 [...   180   3e-46
gb|KVH98803.1| FF domain-containing protein [Cynara cardunculus ...   171   4e-43
gb|KJB63967.1| hypothetical protein B456_010G027200 [Gossypium r...   162   1e-40
gb|KJB63963.1| hypothetical protein B456_010G027200 [Gossypium r...   157   4e-39
gb|PPS03321.1| hypothetical protein GOBAR_AA17344 [Gossypium bar...   158   7e-39
gb|KJB63970.1| hypothetical protein B456_010G027200 [Gossypium r...   157   1e-38
gb|KJB63964.1| hypothetical protein B456_010G027200 [Gossypium r...   157   1e-38
ref|XP_017645752.1| PREDICTED: pre-mRNA-processing protein 40A i...   158   1e-38
ref|XP_016717752.1| PREDICTED: pre-mRNA-processing protein 40A-l...   158   1e-38
ref|XP_017645751.1| PREDICTED: pre-mRNA-processing protein 40A i...   158   1e-38
ref|XP_016717751.1| PREDICTED: pre-mRNA-processing protein 40A-l...   158   1e-38
gb|PPD70121.1| hypothetical protein GOBAR_DD32994 [Gossypium bar...   157   1e-38
gb|KJB63965.1| hypothetical protein B456_010G027200 [Gossypium r...   157   1e-38

>ref|XP_021988537.1| pre-mRNA-processing protein 40A isoform X4 [Helianthus annuus]
 gb|OTG11129.1| putative pre-mRNA-processing protein 40A [Helianthus annuus]
          Length = 922

 Score =  191 bits (485), Expect = 3e-50
 Identities = 119/246 (48%), Positives = 147/246 (59%), Gaps = 19/246 (7%)
 Frame = -3

Query: 962 TPVIPVVNAPLNVXXXXXXXXSHLIPAVGDSSMGSSPLGKTE---SHGAPESLDGVTVQN 792
           TPVIP  NAP NV        S        ++M SSPLGKTE   SHG P+S+DGV+VQ+
Sbjct: 287 TPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSIDGVSVQD 340

Query: 791 IEVA---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATK 621
            E A   ++   KVNT+ ++EK ADDE    A+K                          
Sbjct: 341 TEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASK-------------------------- 374

Query: 620 QERKDLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK--- 450
           QE K  FK+LL++SNV +DW WEQA+RVIIND R  AL    ER Q FNEY+ QRKK   
Sbjct: 375 QEAKMAFKALLEESNVKADWNWEQAMRVIINDKRYGALKAHGERKQAFNEYLMQRKKVEA 434

Query: 449 ----------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYC 300
                     +E+F +MLE+S ELT+SM WSKA+ALFE+D+RYKAVD+ SDREDLF +Y 
Sbjct: 435 EERRLKQRKAKEEFTKMLEESEELTSSMRWSKAMALFEDDERYKAVDRPSDREDLFQNYL 494

Query: 299 VDQQKK 282
           VD QKK
Sbjct: 495 VDLQKK 500



 Score =  124 bits (310), Expect = 5e-27
 Identities = 93/254 (36%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  ++  L+    +  D  W +    + +D R   L
Sbjct: 489  LFQNYLVDLQKKERAKAQEEQRQNRSEYRQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 548

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            + K +R + F EYI   +KEED                    F++MLE+   S  LTA  
Sbjct: 549  E-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMLEEHVTSGTLTAKT 607

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S   DLF     + +KKYHEDK RV+ +L  KKV V
Sbjct: 608  QWRDYCQKVKESVAYQAVASNTSGSTPRDLFEDVVEELEKKYHEDKIRVKDSLKSKKVAV 667

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            L TWT ED KA+I  DIISSLS  NLQ VF DL+            KR  L KDFTELL 
Sbjct: 668  LPTWTLEDLKAAIEDDIISSLSDINLQLVFEDLVERAKEKEEKELKKRLSLVKDFTELLY 727

Query: 47   NMEDITASSTWEEC 6
             +++ITASS+W++C
Sbjct: 728  EIKEITASSSWDDC 741


>ref|XP_021988536.1| pre-mRNA-processing protein 40A isoform X3 [Helianthus annuus]
          Length = 923

 Score =  191 bits (485), Expect = 3e-50
 Identities = 119/246 (48%), Positives = 147/246 (59%), Gaps = 19/246 (7%)
 Frame = -3

Query: 962 TPVIPVVNAPLNVXXXXXXXXSHLIPAVGDSSMGSSPLGKTE---SHGAPESLDGVTVQN 792
           TPVIP  NAP NV        S        ++M SSPLGKTE   SHG P+S+DGV+VQ+
Sbjct: 288 TPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSIDGVSVQD 341

Query: 791 IEVA---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATK 621
            E A   ++   KVNT+ ++EK ADDE    A+K                          
Sbjct: 342 TEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASK-------------------------- 375

Query: 620 QERKDLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK--- 450
           QE K  FK+LL++SNV +DW WEQA+RVIIND R  AL    ER Q FNEY+ QRKK   
Sbjct: 376 QEAKMAFKALLEESNVKADWNWEQAMRVIINDKRYGALKAHGERKQAFNEYLMQRKKVEA 435

Query: 449 ----------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYC 300
                     +E+F +MLE+S ELT+SM WSKA+ALFE+D+RYKAVD+ SDREDLF +Y 
Sbjct: 436 EERRLKQRKAKEEFTKMLEESEELTSSMRWSKAMALFEDDERYKAVDRPSDREDLFQNYL 495

Query: 299 VDQQKK 282
           VD QKK
Sbjct: 496 VDLQKK 501



 Score =  124 bits (310), Expect = 5e-27
 Identities = 93/254 (36%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  ++  L+    +  D  W +    + +D R   L
Sbjct: 490  LFQNYLVDLQKKERAKAQEEQRQNRSEYRQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 549

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            + K +R + F EYI   +KEED                    F++MLE+   S  LTA  
Sbjct: 550  E-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMLEEHVTSGTLTAKT 608

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S   DLF     + +KKYHEDK RV+ +L  KKV V
Sbjct: 609  QWRDYCQKVKESVAYQAVASNTSGSTPRDLFEDVVEELEKKYHEDKIRVKDSLKSKKVAV 668

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            L TWT ED KA+I  DIISSLS  NLQ VF DL+            KR  L KDFTELL 
Sbjct: 669  LPTWTLEDLKAAIEDDIISSLSDINLQLVFEDLVERAKEKEEKELKKRLSLVKDFTELLY 728

Query: 47   NMEDITASSTWEEC 6
             +++ITASS+W++C
Sbjct: 729  EIKEITASSSWDDC 742


>ref|XP_021988535.1| pre-mRNA-processing protein 40A isoform X2 [Helianthus annuus]
          Length = 943

 Score =  191 bits (485), Expect = 3e-50
 Identities = 119/246 (48%), Positives = 147/246 (59%), Gaps = 19/246 (7%)
 Frame = -3

Query: 962 TPVIPVVNAPLNVXXXXXXXXSHLIPAVGDSSMGSSPLGKTE---SHGAPESLDGVTVQN 792
           TPVIP  NAP NV        S        ++M SSPLGKTE   SHG P+S+DGV+VQ+
Sbjct: 308 TPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSIDGVSVQD 361

Query: 791 IEVA---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATK 621
            E A   ++   KVNT+ ++EK ADDE    A+K                          
Sbjct: 362 TEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASK-------------------------- 395

Query: 620 QERKDLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK--- 450
           QE K  FK+LL++SNV +DW WEQA+RVIIND R  AL    ER Q FNEY+ QRKK   
Sbjct: 396 QEAKMAFKALLEESNVKADWNWEQAMRVIINDKRYGALKAHGERKQAFNEYLMQRKKVEA 455

Query: 449 ----------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYC 300
                     +E+F +MLE+S ELT+SM WSKA+ALFE+D+RYKAVD+ SDREDLF +Y 
Sbjct: 456 EERRLKQRKAKEEFTKMLEESEELTSSMRWSKAMALFEDDERYKAVDRPSDREDLFQNYL 515

Query: 299 VDQQKK 282
           VD QKK
Sbjct: 516 VDLQKK 521



 Score =  124 bits (310), Expect = 5e-27
 Identities = 93/254 (36%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  ++  L+    +  D  W +    + +D R   L
Sbjct: 510  LFQNYLVDLQKKERAKAQEEQRQNRSEYRQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 569

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            + K +R + F EYI   +KEED                    F++MLE+   S  LTA  
Sbjct: 570  E-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMLEEHVTSGTLTAKT 628

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S   DLF     + +KKYHEDK RV+ +L  KKV V
Sbjct: 629  QWRDYCQKVKESVAYQAVASNTSGSTPRDLFEDVVEELEKKYHEDKIRVKDSLKSKKVAV 688

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            L TWT ED KA+I  DIISSLS  NLQ VF DL+            KR  L KDFTELL 
Sbjct: 689  LPTWTLEDLKAAIEDDIISSLSDINLQLVFEDLVERAKEKEEKELKKRLSLVKDFTELLY 748

Query: 47   NMEDITASSTWEEC 6
             +++ITASS+W++C
Sbjct: 749  EIKEITASSSWDDC 762


>ref|XP_021988534.1| pre-mRNA-processing protein 40A isoform X1 [Helianthus annuus]
          Length = 944

 Score =  191 bits (485), Expect = 3e-50
 Identities = 119/246 (48%), Positives = 147/246 (59%), Gaps = 19/246 (7%)
 Frame = -3

Query: 962 TPVIPVVNAPLNVXXXXXXXXSHLIPAVGDSSMGSSPLGKTE---SHGAPESLDGVTVQN 792
           TPVIP  NAP NV        S        ++M SSPLGKTE   SHG P+S+DGV+VQ+
Sbjct: 309 TPVIPAGNAPPNVASEPSSTVS------ASANMHSSPLGKTENSSSHGVPKSIDGVSVQD 362

Query: 791 IEVA---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATK 621
            E A   ++   KVNT+ ++EK ADDE    A+K                          
Sbjct: 363 TEEAKKGMAAAGKVNTTPVDEKAADDEQFLYASK-------------------------- 396

Query: 620 QERKDLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK--- 450
           QE K  FK+LL++SNV +DW WEQA+RVIIND R  AL    ER Q FNEY+ QRKK   
Sbjct: 397 QEAKMAFKALLEESNVKADWNWEQAMRVIINDKRYGALKAHGERKQAFNEYLMQRKKVEA 456

Query: 449 ----------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYC 300
                     +E+F +MLE+S ELT+SM WSKA+ALFE+D+RYKAVD+ SDREDLF +Y 
Sbjct: 457 EERRLKQRKAKEEFTKMLEESEELTSSMRWSKAMALFEDDERYKAVDRPSDREDLFQNYL 516

Query: 299 VDQQKK 282
           VD QKK
Sbjct: 517 VDLQKK 522



 Score =  124 bits (310), Expect = 5e-27
 Identities = 93/254 (36%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  ++  L+    +  D  W +    + +D R   L
Sbjct: 511  LFQNYLVDLQKKERAKAQEEQRQNRSEYRQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 570

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            + K +R + F EYI   +KEED                    F++MLE+   S  LTA  
Sbjct: 571  E-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMLEEHVTSGTLTAKT 629

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S   DLF     + +KKYHEDK RV+ +L  KKV V
Sbjct: 630  QWRDYCQKVKESVAYQAVASNTSGSTPRDLFEDVVEELEKKYHEDKIRVKDSLKSKKVAV 689

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            L TWT ED KA+I  DIISSLS  NLQ VF DL+            KR  L KDFTELL 
Sbjct: 690  LPTWTLEDLKAAIEDDIISSLSDINLQLVFEDLVERAKEKEEKELKKRLSLVKDFTELLY 749

Query: 47   NMEDITASSTWEEC 6
             +++ITASS+W++C
Sbjct: 750  EIKEITASSSWDDC 763


>ref|XP_023746549.1| pre-mRNA-processing protein 40A isoform X4 [Lactuca sativa]
          Length = 760

 Score =  180 bits (456), Expect = 1e-46
 Identities = 112/242 (46%), Positives = 143/242 (59%), Gaps = 23/242 (9%)
 Frame = -3

Query: 938 APLNVXXXXXXXXSHLIPAVGDSSM-----GSSPLGKTES--HGAPESLDGVTVQNIEVA 780
           AP NV          L PAV  +SM      SSP+   +S  HG P++LDGV+  + E A
Sbjct: 291 APHNVGSESSSVAIPLNPAVVAASMIPPNLHSSPMKMEDSSSHGVPKTLDGVSTHDTEEA 350

Query: 779 ---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATKQERK 609
              ++V  KVNT+ +EEK+ DDEP   A+K                          QE K
Sbjct: 351 KKGMAVAGKVNTTQIEEKVVDDEPFIYASK--------------------------QEAK 384

Query: 608 DLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK------- 450
             FK+LL+D+NV +DW WEQA+RVIIND R  AL T  ER Q FNEY+ QRKK       
Sbjct: 385 VAFKALLEDANVEADWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLMQRKKLEAEERR 444

Query: 449 ------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQ 288
                 +E+F +MLE+S+ELT+SM WSKA+A+FE+D+RYKAVD+ SDREDLF +Y VD Q
Sbjct: 445 LRQRKAKEEFTKMLEESKELTSSMRWSKAMAMFEDDERYKAVDRPSDREDLFQNYLVDLQ 504

Query: 287 KK 282
           KK
Sbjct: 505 KK 506



 Score =  135 bits (341), Expect = 4e-31
 Identities = 96/254 (37%), Positives = 133/254 (52%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  +K  L+    +  D  W +    + +D R   L
Sbjct: 495  LFQNYLVDLQKKERAKAQEEQRQYRSEYKQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 554

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            D K +R + F EYI   +KEED                    F++M+E+   S  LTA  
Sbjct: 555  D-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMMEEDVNSGTLTAKT 613

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S  +DLF     + +KKYH+DK+RV+ A+ LKKV+V
Sbjct: 614  QWRDYCQKVKESVAYQAVASNTSGSTPKDLFEDVAEELEKKYHDDKTRVKDAMKLKKVSV 673

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            + TWTFEDFKA+I  DIISSLS  NLQ V+ D++            KRQ L K+FT+LL 
Sbjct: 674  VPTWTFEDFKAAIEDDIISSLSDINLQLVYEDVVERAKEKEEKEAKKRQRLTKEFTDLLY 733

Query: 47   NMEDITASSTWEEC 6
            +++DITASSTWEEC
Sbjct: 734  DIKDITASSTWEEC 747


>ref|XP_023746548.1| pre-mRNA-processing protein 40A isoform X3 [Lactuca sativa]
          Length = 933

 Score =  180 bits (456), Expect = 3e-46
 Identities = 112/242 (46%), Positives = 143/242 (59%), Gaps = 23/242 (9%)
 Frame = -3

Query: 938 APLNVXXXXXXXXSHLIPAVGDSSM-----GSSPLGKTES--HGAPESLDGVTVQNIEVA 780
           AP NV          L PAV  +SM      SSP+   +S  HG P++LDGV+  + E A
Sbjct: 278 APHNVGSESSSVAIPLNPAVVAASMIPPNLHSSPMKMEDSSSHGVPKTLDGVSTHDTEEA 337

Query: 779 ---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATKQERK 609
              ++V  KVNT+ +EEK+ DDEP   A+K                          QE K
Sbjct: 338 KKGMAVAGKVNTTQIEEKVVDDEPFIYASK--------------------------QEAK 371

Query: 608 DLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK------- 450
             FK+LL+D+NV +DW WEQA+RVIIND R  AL T  ER Q FNEY+ QRKK       
Sbjct: 372 VAFKALLEDANVEADWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLMQRKKLEAEERR 431

Query: 449 ------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQ 288
                 +E+F +MLE+S+ELT+SM WSKA+A+FE+D+RYKAVD+ SDREDLF +Y VD Q
Sbjct: 432 LRQRKAKEEFTKMLEESKELTSSMRWSKAMAMFEDDERYKAVDRPSDREDLFQNYLVDLQ 491

Query: 287 KK 282
           KK
Sbjct: 492 KK 493



 Score =  135 bits (341), Expect = 4e-31
 Identities = 96/254 (37%), Positives = 133/254 (52%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  +K  L+    +  D  W +    + +D R   L
Sbjct: 482  LFQNYLVDLQKKERAKAQEEQRQYRSEYKQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 541

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            D K +R + F EYI   +KEED                    F++M+E+   S  LTA  
Sbjct: 542  D-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMMEEDVNSGTLTAKT 600

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S  +DLF     + +KKYH+DK+RV+ A+ LKKV+V
Sbjct: 601  QWRDYCQKVKESVAYQAVASNTSGSTPKDLFEDVAEELEKKYHDDKTRVKDAMKLKKVSV 660

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            + TWTFEDFKA+I  DIISSLS  NLQ V+ D++            KRQ L K+FT+LL 
Sbjct: 661  VPTWTFEDFKAAIEDDIISSLSDINLQLVYEDVVERAKEKEEKEAKKRQRLTKEFTDLLY 720

Query: 47   NMEDITASSTWEEC 6
            +++DITASSTWEEC
Sbjct: 721  DIKDITASSTWEEC 734


>ref|XP_023746547.1| pre-mRNA-processing protein 40A isoform X2 [Lactuca sativa]
          Length = 945

 Score =  180 bits (456), Expect = 3e-46
 Identities = 112/242 (46%), Positives = 143/242 (59%), Gaps = 23/242 (9%)
 Frame = -3

Query: 938 APLNVXXXXXXXXSHLIPAVGDSSM-----GSSPLGKTES--HGAPESLDGVTVQNIEVA 780
           AP NV          L PAV  +SM      SSP+   +S  HG P++LDGV+  + E A
Sbjct: 290 APHNVGSESSSVAIPLNPAVVAASMIPPNLHSSPMKMEDSSSHGVPKTLDGVSTHDTEEA 349

Query: 779 ---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATKQERK 609
              ++V  KVNT+ +EEK+ DDEP   A+K                          QE K
Sbjct: 350 KKGMAVAGKVNTTQIEEKVVDDEPFIYASK--------------------------QEAK 383

Query: 608 DLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK------- 450
             FK+LL+D+NV +DW WEQA+RVIIND R  AL T  ER Q FNEY+ QRKK       
Sbjct: 384 VAFKALLEDANVEADWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLMQRKKLEAEERR 443

Query: 449 ------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQ 288
                 +E+F +MLE+S+ELT+SM WSKA+A+FE+D+RYKAVD+ SDREDLF +Y VD Q
Sbjct: 444 LRQRKAKEEFTKMLEESKELTSSMRWSKAMAMFEDDERYKAVDRPSDREDLFQNYLVDLQ 503

Query: 287 KK 282
           KK
Sbjct: 504 KK 505



 Score =  135 bits (341), Expect = 4e-31
 Identities = 96/254 (37%), Positives = 133/254 (52%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  +K  L+    +  D  W +    + +D R   L
Sbjct: 494  LFQNYLVDLQKKERAKAQEEQRQYRSEYKQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 553

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            D K +R + F EYI   +KEED                    F++M+E+   S  LTA  
Sbjct: 554  D-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMMEEDVNSGTLTAKT 612

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S  +DLF     + +KKYH+DK+RV+ A+ LKKV+V
Sbjct: 613  QWRDYCQKVKESVAYQAVASNTSGSTPKDLFEDVAEELEKKYHDDKTRVKDAMKLKKVSV 672

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            + TWTFEDFKA+I  DIISSLS  NLQ V+ D++            KRQ L K+FT+LL 
Sbjct: 673  VPTWTFEDFKAAIEDDIISSLSDINLQLVYEDVVERAKEKEEKEAKKRQRLTKEFTDLLY 732

Query: 47   NMEDITASSTWEEC 6
            +++DITASSTWEEC
Sbjct: 733  DIKDITASSTWEEC 746


>ref|XP_023746546.1| pre-mRNA-processing protein 40A isoform X1 [Lactuca sativa]
 gb|PLY64144.1| hypothetical protein LSAT_1X581 [Lactuca sativa]
          Length = 946

 Score =  180 bits (456), Expect = 3e-46
 Identities = 112/242 (46%), Positives = 143/242 (59%), Gaps = 23/242 (9%)
 Frame = -3

Query: 938 APLNVXXXXXXXXSHLIPAVGDSSM-----GSSPLGKTES--HGAPESLDGVTVQNIEVA 780
           AP NV          L PAV  +SM      SSP+   +S  HG P++LDGV+  + E A
Sbjct: 291 APHNVGSESSSVAIPLNPAVVAASMIPPNLHSSPMKMEDSSSHGVPKTLDGVSTHDTEEA 350

Query: 779 ---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSLLKDATKQERK 609
              ++V  KVNT+ +EEK+ DDEP   A+K                          QE K
Sbjct: 351 KKGMAVAGKVNTTQIEEKVVDDEPFIYASK--------------------------QEAK 384

Query: 608 DLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQRKK------- 450
             FK+LL+D+NV +DW WEQA+RVIIND R  AL T  ER Q FNEY+ QRKK       
Sbjct: 385 VAFKALLEDANVEADWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLMQRKKLEAEERR 444

Query: 449 ------EEDFKRMLEDSRELTASMTWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQ 288
                 +E+F +MLE+S+ELT+SM WSKA+A+FE+D+RYKAVD+ SDREDLF +Y VD Q
Sbjct: 445 LRQRKAKEEFTKMLEESKELTSSMRWSKAMAMFEDDERYKAVDRPSDREDLFQNYLVDLQ 504

Query: 287 KK 282
           KK
Sbjct: 505 KK 506



 Score =  135 bits (341), Expect = 4e-31
 Identities = 96/254 (37%), Positives = 133/254 (52%), Gaps = 38/254 (14%)
 Frame = -3

Query: 653  LFKSLLKDATKQER----------KDLFKSLLKDSN-VSSDWTWEQAIRVIINDIRLIAL 507
            LF++ L D  K+ER          +  +K  L+    +  D  W +    + +D R   L
Sbjct: 495  LFQNYLVDLQKKERAKAQEEQRQYRSEYKQFLETCGLIKVDTQWRKVQDRLEDDERCSRL 554

Query: 506  DTKAERDQTFNEYIEQRKKEED--------------------FKRMLED---SRELTASM 396
            D K +R + F EYI   +KEED                    F++M+E+   S  LTA  
Sbjct: 555  D-KIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMMEEDVNSGTLTAKT 613

Query: 395  TWSKAVALFENDKRYKAV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTV 225
             W       +    Y+AV      S  +DLF     + +KKYH+DK+RV+ A+ LKKV+V
Sbjct: 614  QWRDYCQKVKESVAYQAVASNTSGSTPKDLFEDVAEELEKKYHDDKTRVKDAMKLKKVSV 673

Query: 224  LTTWTFEDFKASIGKDIISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLN 48
            + TWTFEDFKA+I  DIISSLS  NLQ V+ D++            KRQ L K+FT+LL 
Sbjct: 674  VPTWTFEDFKAAIEDDIISSLSDINLQLVYEDVVERAKEKEEKEAKKRQRLTKEFTDLLY 733

Query: 47   NMEDITASSTWEEC 6
            +++DITASSTWEEC
Sbjct: 734  DIKDITASSTWEEC 747


>gb|KVH98803.1| FF domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 1071

 Score =  171 bits (433), Expect = 4e-43
 Identities = 117/264 (44%), Positives = 147/264 (55%), Gaps = 38/264 (14%)
 Frame = -3

Query: 959  PVIPVVNAPLNVXXXXXXXXSH-------LIPAVGDSSMGSSPLGKTE---SHGAPESLD 810
            PVIPV N P NV        +        LIPAVG +SM  SP+  TE   SHG P++++
Sbjct: 316  PVIPVGNVPPNVGSESSSTAAGERVTAVPLIPAVGGASM-VSPMTSTENSSSHGVPKAVE 374

Query: 809  GVTVQNIEVA---ISVDEKVNTSSLEEKIADDEPLADATKHERKDISKCSLKDAPLFKSL 639
             V+ Q+ E A   ++V  KVNT+ LEEK  DDEP   A+K                    
Sbjct: 375  -VSAQDTEEAKKGMAVAGKVNTTQLEEKAVDDEPFIYASK-------------------- 413

Query: 638  LKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
                  QE K  FKSLL+D+NV +DW WEQA+RVIIND R  AL T  ER Q FNEY+ Q
Sbjct: 414  ------QEAKIAFKSLLEDANVEADWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLMQ 467

Query: 458  RKKEEDFKRML-------------------------EDSRELTASMTWSKAVALFENDKR 354
            RKK E  +R L                         ++S+ELT+SM WSKA+A+FE+D+R
Sbjct: 468  RKKLEAEERRLRQRKAKEEIPDAHPDSSDPGCTYHQQESKELTSSMRWSKAMAMFEDDER 527

Query: 353  YKAVDQASDREDLFGSYCVDQQKK 282
            YKAV++ SDREDLF +Y VD QKK
Sbjct: 528  YKAVERPSDREDLFQNYLVDLQKK 551



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 66/211 (31%), Positives = 94/211 (44%), Gaps = 47/211 (22%)
 Frame = -3

Query: 635  KDATKQERKDLFKSLLKDSNVSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQR 456
            ++  +Q R +  + L     +  D  W +    + +D R   L+ K +R + F EYI   
Sbjct: 576  QEEQRQYRLEYRQFLESCGLIKVDTQWRKVQDRLEDDERCSRLE-KIDRLEIFQEYIRDL 634

Query: 455  KKEED--------------------FKRMLED---SRELTASMTWSKAVALFENDKRYKA 345
            +KEED                    F++M+E+   S  LTA   W       +    Y+A
Sbjct: 635  EKEEDEQRKIKKEHIKRVERKNRDEFRKMMEEHVISGALTAKTQWRDYCQKVKESVAYQA 694

Query: 344  V---DQASDREDLFGSYCVDQQKK---------------------YHEDKSRVEGALNLK 237
            V      S  +DLF     + +KK                     YHEDK+RV+ A+ LK
Sbjct: 695  VASNTSGSTPKDLFEDVTEELEKKVLVSDFTHVHQWKIYEIESIGYHEDKTRVKDAMKLK 754

Query: 236  KVTVLTTWTFEDFKASIGKDIISSLSYFNLQ 144
            KVTV  TWT EDFK +I +DIISSLS  +LQ
Sbjct: 755  KVTVAPTWTLEDFKVAIEEDIISSLSDVSLQ 785


>gb|KJB63967.1| hypothetical protein B456_010G027200 [Gossypium raimondii]
          Length = 675

 Score =  162 bits (410), Expect = 1e-40
 Identities = 98/234 (41%), Positives = 131/234 (55%), Gaps = 16/234 (6%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 359 PSVGATTAVTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 418

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 419 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 452

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 453 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 512

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKK 234
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K   ++ R +G    KK
Sbjct: 513 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKKEREREREKGKDRSKK 566


>gb|KJB63963.1| hypothetical protein B456_010G027200 [Gossypium raimondii]
          Length = 654

 Score =  157 bits (398), Expect = 4e-39
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 29  PSVGATTAVTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 88

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 89  LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 122

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 123 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 182

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 183 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 223



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 31/238 (13%)
 Frame = -3

Query: 629 ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
           A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 225 AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 283

Query: 458 RKKEED--------------------FKRMLED---SRELTASMTWSKAVALFENDKRYK 348
            +KEE+                    F++++E+      LTA   W       +   +Y 
Sbjct: 284 LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKVKELPQYL 343

Query: 347 AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
           AV      S  +DLF     +  K+YHE K+R++ A+   KVT++ +WTFEDFKA+I +D
Sbjct: 344 AVASNTSGSTPKDLFEDVAEELDKQYHEHKTRIKEAMKTGKVTMVYSWTFEDFKAAISED 403

Query: 176 I-ISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLNNMEDITASSTWEE 9
           +  SS+S  NL+ V+ +L+            KRQ LA DFT LL+  ++ITASS WEE
Sbjct: 404 VGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSDWEE 461


>gb|PPS03321.1| hypothetical protein GOBAR_AA17344 [Gossypium barbadense]
          Length = 930

 Score =  158 bits (400), Expect = 7e-39
 Identities = 95/221 (42%), Positives = 126/221 (57%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887  PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
            P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 435  PSVGANTAVTRSSETTSTQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 494

Query: 716  LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
            L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 495  LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 528

Query: 536  IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
            IIND R  AL T  ER Q+FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 529  IINDKRYGALKTLGERKQSFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 588

Query: 395  TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
             WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 589  RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 629


>gb|KJB63970.1| hypothetical protein B456_010G027200 [Gossypium raimondii]
          Length = 775

 Score =  157 bits (398), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 359 PSVGATTAVTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 418

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 419 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 452

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 453 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 512

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 513 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 553



 Score = 68.9 bits (167), Expect = 7e-09
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 30/196 (15%)
 Frame = -3

Query: 629  ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
            A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 555  AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 613

Query: 458  RKKEED--------------------FKRMLED---SRELTASMTWSKAVALFENDKRYK 348
             +KEE+                    F++++E+      LTA   W       +   +Y 
Sbjct: 614  LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKVKELPQYL 673

Query: 347  AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
            AV      S  +DLF     +  K+YHE K+R++ A+   KVT++ +WTFEDFKA+I +D
Sbjct: 674  AVASNTSGSTPKDLFEDVAEELDKQYHEHKTRIKEAMKTGKVTMVYSWTFEDFKAAISED 733

Query: 176  I-ISSLSYFNLQRVFL 132
            +  SS+S  NL+ + L
Sbjct: 734  VGSSSISDINLKVLLL 749


>gb|KJB63964.1| hypothetical protein B456_010G027200 [Gossypium raimondii]
          Length = 802

 Score =  157 bits (398), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 177 PSVGATTAVTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 236

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 237 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 270

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 271 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 330

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 331 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 371



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 31/238 (13%)
 Frame = -3

Query: 629  ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
            A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 373  AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 431

Query: 458  RKKEED--------------------FKRMLED---SRELTASMTWSKAVALFENDKRYK 348
             +KEE+                    F++++E+      LTA   W       +   +Y 
Sbjct: 432  LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKVKELPQYL 491

Query: 347  AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
            AV      S  +DLF     +  K+YHE K+R++ A+   KVT++ +WTFEDFKA+I +D
Sbjct: 492  AVASNTSGSTPKDLFEDVAEELDKQYHEHKTRIKEAMKTGKVTMVYSWTFEDFKAAISED 551

Query: 176  I-ISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLNNMEDITASSTWEE 9
            +  SS+S  NL+ V+ +L+            KRQ LA DFT LL+  ++ITASS WEE
Sbjct: 552  VGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSDWEE 609


>ref|XP_017645752.1| PREDICTED: pre-mRNA-processing protein 40A isoform X2 [Gossypium
           arboreum]
          Length = 984

 Score =  158 bits (399), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 359 PSVGANTAVTRSSETTSTQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 418

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 419 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 452

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 453 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 512

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 513 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 553



 Score = 96.3 bits (238), Expect = 9e-18
 Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 31/238 (13%)
 Frame = -3

Query: 629  ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
            A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 555  AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 613

Query: 458  RKKEED--------------------FKRMLEDS---RELTASMTWSKAVALFENDKRYK 348
             +KEE+                    F++++E++     LTA   W       +   +Y 
Sbjct: 614  LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEENVADGTLTAKTYWRDYCLKVKELPQYL 673

Query: 347  AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
            AV      S  +DLF     +  K+YHEDK+R++ A+   KVT++ +WTFEDFK +I +D
Sbjct: 674  AVASNTSGSTPKDLFEDVAEELDKQYHEDKTRIKEAMKTGKVTMVYSWTFEDFKTAISED 733

Query: 176  I-ISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLNNMEDITASSTWEE 9
            +  SS+S  NL+ V+ +L+            KRQ LA DFT LL+  ++ITASS WEE
Sbjct: 734  VGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSNWEE 791


>ref|XP_016717752.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2
           [Gossypium hirsutum]
          Length = 984

 Score =  158 bits (399), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 359 PSVGANTAVTRSSETTSTQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 418

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 419 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 452

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 453 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 512

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 513 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 553



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 31/238 (13%)
 Frame = -3

Query: 629  ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
            A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 555  AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 613

Query: 458  RKKEED--------------------FKRMLED---SRELTASMTWSKAVALFENDKRYK 348
             +KEE+                    F++++E+      LTA   W       +   +Y 
Sbjct: 614  LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKVKELPQYL 673

Query: 347  AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
            AV      S  +DLF     +  K+YHEDK+R++ A+   KVT++ +WTFEDFK +I +D
Sbjct: 674  AVASNTSGSTPKDLFEDVAEELDKQYHEDKTRIKEAMKTGKVTMVYSWTFEDFKTAISED 733

Query: 176  I-ISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLNNMEDITASSTWEE 9
            +  SS+S  NL+ V+ +L+            KRQ LA DFT LL+  ++ITASS WEE
Sbjct: 734  VGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSNWEE 791


>ref|XP_017645751.1| PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Gossypium
           arboreum]
          Length = 1026

 Score =  158 bits (399), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 401 PSVGANTAVTRSSETTSTQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 460

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 461 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 494

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 495 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 554

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 555 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 595



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 31/238 (13%)
 Frame = -3

Query: 629  ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
            A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 597  AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 655

Query: 458  RKKEED--------------------FKRMLEDS---RELTASMTWSKAVALFENDKRYK 348
             +KEE+                    F++++E++     LTA   W       +   +Y 
Sbjct: 656  LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEENVADGTLTAKTYWRDYCLKVKELPQYL 715

Query: 347  AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
            AV      S  +DLF     +  K+YHEDK+R++ A+   KVT++ +WTFEDFK +I +D
Sbjct: 716  AVASNTSGSTPKDLFEDVAEELDKQYHEDKTRIKEAMKTGKVTMVYSWTFEDFKTAISED 775

Query: 176  I-ISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLNNMEDITASSTWEE 9
            +  SS+S  NL+ V+ +L+            KRQ LA DFT LL+  ++ITASS WEE
Sbjct: 776  VGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSNWEE 833


>ref|XP_016717751.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1
           [Gossypium hirsutum]
          Length = 1026

 Score =  158 bits (399), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 401 PSVGANTAVTRSSETTSTQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 460

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 461 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 494

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 495 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 554

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 555 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 595



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 31/238 (13%)
 Frame = -3

Query: 629  ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
            A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 597  AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 655

Query: 458  RKKEED--------------------FKRMLED---SRELTASMTWSKAVALFENDKRYK 348
             +KEE+                    F++++E+      LTA   W       +   +Y 
Sbjct: 656  LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKVKELPQYL 715

Query: 347  AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
            AV      S  +DLF     +  K+YHEDK+R++ A+   KVT++ +WTFEDFK +I +D
Sbjct: 716  AVASNTSGSTPKDLFEDVAEELDKQYHEDKTRIKEAMKTGKVTMVYSWTFEDFKTAISED 775

Query: 176  I-ISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLNNMEDITASSTWEE 9
            +  SS+S  NL+ V+ +L+            KRQ LA DFT LL+  ++ITASS WEE
Sbjct: 776  VGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSNWEE 833


>gb|PPD70121.1| hypothetical protein GOBAR_DD32994 [Gossypium barbadense]
          Length = 871

 Score =  157 bits (398), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 380 PSVGANTAVTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 439

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 440 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 473

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 474 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 533

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 534 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 574


>gb|KJB63965.1| hypothetical protein B456_010G027200 [Gossypium raimondii]
          Length = 919

 Score =  157 bits (398), Expect = 1e-38
 Identities = 95/221 (42%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
 Frame = -3

Query: 887 PAVGDSSMGSSPLGKTESHGAPESLDGVTVQNIEVA---ISVDEKVNTSSLEEKIADDEP 717
           P+VG ++  +     T +       DG + Q+IE A   ++   KVN + +EEK+ DDEP
Sbjct: 359 PSVGATTAVTRSSETTATQDTMHFADGASAQDIEEAKKGMATAGKVNMTPVEEKVPDDEP 418

Query: 716 LADATKHERKDISKCSLKDAPLFKSLLKDATKQERKDLFKSLLKDSNVSSDWTWEQAIRV 537
           L  A K                           E K+ FKSLL+ +NV SDWTWEQ +R 
Sbjct: 419 LVYANK--------------------------LEAKNAFKSLLESANVQSDWTWEQTMRE 452

Query: 536 IINDIRLIALDTKAERDQTFNEYIEQRKK-------------EEDFKRMLEDSRELTASM 396
           IIND R  AL T  ER Q FNEY+ QRKK              E+F +MLE+S+ELT+SM
Sbjct: 453 IINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTKMLEESKELTSSM 512

Query: 395 TWSKAVALFENDKRYKAVDQASDREDLFGSYCVDQQKKYHE 273
            WSKA +LFEND+R+KAV++A DREDLF +Y VD ++K  E
Sbjct: 513 RWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKERE 553



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 31/238 (13%)
 Frame = -3

Query: 629  ATKQERKDL--FKSLLKDSN-VSSDWTWEQAIRVIINDIRLIALDTKAERDQTFNEYIEQ 459
            A +++R+++  ++  L+  + + ++  W +    + +D R   L+ K +R   F +YI  
Sbjct: 555  AAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLE-KIDRLLIFQDYIHD 613

Query: 458  RKKEED--------------------FKRMLED---SRELTASMTWSKAVALFENDKRYK 348
             +KEE+                    F++++E+      LTA   W       +   +Y 
Sbjct: 614  LEKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGTLTAKTYWRDYCLKVKELPQYL 673

Query: 347  AV---DQASDREDLFGSYCVDQQKKYHEDKSRVEGALNLKKVTVLTTWTFEDFKASIGKD 177
            AV      S  +DLF     +  K+YHE K+R++ A+   KVT++ +WTFEDFKA+I +D
Sbjct: 674  AVASNTSGSTPKDLFEDVAEELDKQYHEHKTRIKEAMKTGKVTMVYSWTFEDFKAAISED 733

Query: 176  I-ISSLSYFNLQRVFLDLI-XXXXXXXXXXXKRQCLAKDFTELLNNMEDITASSTWEE 9
            +  SS+S  NL+ V+ +L+            KRQ LA DFT LL+  ++ITASS WEE
Sbjct: 734  VGSSSISDINLKLVYDELLERAKEKEEKEAKKRQRLADDFTRLLHTYKEITASSDWEE 791