BLASTX nr result
ID: Chrysanthemum21_contig00011971
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00011971
(650 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PLY82164.1| hypothetical protein LSAT_1X12220 [Lactuca sativa] 139 3e-34
ref|XP_023768211.1| DNA-directed RNA polymerase II subunit 1 [La... 139 3e-34
ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [He... 136 3e-33
gb|KVH98528.1| RNA polymerase II, heptapeptide repeat, eukaryoti... 136 3e-33
gb|EMS47149.1| DNA-directed RNA polymerase II subunit RPB1 [Trit... 87 2e-31
ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II su... 129 9e-31
gb|KZM93495.1| hypothetical protein DCAR_016740 [Daucus carota s... 129 1e-30
ref|XP_003612256.2| DNA-directed RNA polymerase [Medicago trunca... 124 5e-29
ref|XP_008361350.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 122 2e-28
ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 122 2e-28
ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II su... 122 2e-28
ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II su... 122 2e-28
ref|XP_008337964.1| PREDICTED: DNA-directed RNA polymerase II su... 122 2e-28
ref|XP_021819526.1| DNA-directed RNA polymerase II subunit 1 [Pr... 122 2e-28
ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II su... 122 2e-28
ref|XP_007203058.1| DNA-directed RNA polymerase II subunit 1 [Pr... 122 2e-28
dbj|GAU22667.1| hypothetical protein TSUD_234890 [Trifolium subt... 121 4e-28
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su... 121 4e-28
ref|XP_021649879.1| DNA-directed RNA polymerase II subunit 1 [He... 121 4e-28
dbj|GAV78585.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol... 121 6e-28
>gb|PLY82164.1| hypothetical protein LSAT_1X12220 [Lactuca sativa]
Length = 1319
Score = 139 bits (350), Expect = 3e-34
Identities = 67/78 (85%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPMTPFHDGSMSP-NYPFSPSIR 177
GTGDCALLLNEEML+QAIDVQLPSYMDGLDIGMTPGRSP+TPFHDG+MSP NY SP++R
Sbjct: 982 GTGDCALLLNEEMLQQAIDVQLPSYMDGLDIGMTPGRSPITPFHDGAMSPTNYLLSPNLR 1041
Query: 178 FSPGMDAQFSPYVGGMGF 231
SP DAQFSPYVGGMGF
Sbjct: 1042 LSPINDAQFSPYVGGMGF 1059
>ref|XP_023768211.1| DNA-directed RNA polymerase II subunit 1 [Lactuca sativa]
Length = 1819
Score = 139 bits (350), Expect = 3e-34
Identities = 67/78 (85%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPMTPFHDGSMSP-NYPFSPSIR 177
GTGDCALLLNEEML+QAIDVQLPSYMDGLDIGMTPGRSP+TPFHDG+MSP NY SP++R
Sbjct: 1457 GTGDCALLLNEEMLQQAIDVQLPSYMDGLDIGMTPGRSPITPFHDGAMSPTNYLLSPNLR 1516
Query: 178 FSPGMDAQFSPYVGGMGF 231
SP DAQFSPYVGGMGF
Sbjct: 1517 LSPINDAQFSPYVGGMGF 1534
>ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [Helianthus annuus]
gb|OTG28102.1| putative RNA polymerase II large subunit [Helianthus annuus]
Length = 1824
Score = 136 bits (343), Expect = 3e-33
Identities = 65/78 (83%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPMTPFHDGSMSP-NYPFSPSIR 177
GTGDCALLLNE+ML+QAIDVQLPSYMDGLDIGMTPGRSP+TP+HDG MSP NY SP++R
Sbjct: 1457 GTGDCALLLNEQMLQQAIDVQLPSYMDGLDIGMTPGRSPITPYHDGMMSPTNYLLSPNLR 1516
Query: 178 FSPGMDAQFSPYVGGMGF 231
SP DAQFSPYVGGMGF
Sbjct: 1517 LSPFNDAQFSPYVGGMGF 1534
>gb|KVH98528.1| RNA polymerase II, heptapeptide repeat, eukaryotic [Cynara
cardunculus var. scolymus]
Length = 1114
Score = 136 bits (342), Expect = 3e-33
Identities = 65/78 (83%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPMTPFHDGSMSP-NYPFSPSIR 177
GTGDCAL LNE+ML+QAIDVQLPSYMDGLDIGMTPGRSP+TPFHDG+MSP NY SP++R
Sbjct: 731 GTGDCALYLNEQMLQQAIDVQLPSYMDGLDIGMTPGRSPITPFHDGAMSPTNYLLSPNLR 790
Query: 178 FSPGMDAQFSPYVGGMGF 231
SP DAQFSPYVGGMGF
Sbjct: 791 LSPINDAQFSPYVGGMGF 808
>gb|EMS47149.1| DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu]
Length = 1846
Score = 86.7 bits (213), Expect(2) = 2e-31
Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLD--IGMTPGRSPM--TPFHDGS-MSPNYPFS 165
GTG C L LNEEML+QAI++QLPSY++GLD GM S + TP+HDG MSP S
Sbjct: 1522 GTGGCGLYLNEEMLKQAIELQLPSYVEGLDYGYGMASAHSSISGTPYHDGGMMSP--VLS 1579
Query: 166 PSIRFSPGMDAQFSPYVGGMGF 231
P+ R SP AQFSPYVGGM F
Sbjct: 1580 PNFRASPVTGAQFSPYVGGMAF 1601
Score = 77.4 bits (189), Expect(2) = 2e-31
Identities = 42/122 (34%), Positives = 68/122 (55%)
Frame = +3
Query: 273 IQPVLSWI*PDLTWL*PDLTWI*PHLTGL*SDFTDLQSEFARI*SNQSYIFXXXXXXXXX 452
IQP ++W+ PD+T L PD+T + P++T L D T+LQ F + + + +
Sbjct: 1642 IQPYVAWLQPDVTELQPDITELQPYVTELQPDITELQPYFTELLPDVTELQPYFTELLPD 1701
Query: 453 XXXXXXNFTQLLTHIT*LQPDISSLQPDITGIQPDITGIQPNISIIQPDLAIVQPDVSVI 632
FT+LL +T LQP + L PD+T +QP T + P+++ +QP + PDV+ +
Sbjct: 1702 VTELQPYFTELLPDVTELQPYFTKLLPDVTELQPYFTELLPDVTELQPYFTELLPDVTEL 1761
Query: 633 QP 638
QP
Sbjct: 1762 QP 1763
Score = 62.0 bits (149), Expect = 2e-07
Identities = 39/124 (31%), Positives = 64/124 (51%)
Frame = +3
Query: 243 ITWL*SFFSWIQPVLSWI*PDLTWL*PDLTWI*PHLTGL*SDFTDLQSEFARI*SNQSYI 422
IT L + + +QP ++ + P T L PD+T + P+ T L D T+LQ F + + + +
Sbjct: 1660 ITELQPYVTELQPDITELQPYFTELLPDVTELQPYFTELLPDVTELQPYFTELLPDVTEL 1719
Query: 423 FXXXXXXXXXXXXXXXNFTQLLTHIT*LQPDISSLQPDITGIQPDITGIQPNISIIQPDL 602
FT+LL +T LQP + L PD+T +QP +T + P ++ +QP +
Sbjct: 1720 QPYFTKLLPDVTELQPYFTELLPDVTELQPYFTELLPDVTELQPYLTELLPEVTELQPYV 1779
Query: 603 AIVQ 614
VQ
Sbjct: 1780 TFVQ 1783
>ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 129 bits (324), Expect = 9e-31
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDC+L LNE+ML+QAID+QLPSYMDGLD GMTP RSP+ TP+HDG MSPNY SP++
Sbjct: 1457 GTGDCSLYLNEKMLKQAIDIQLPSYMDGLDFGMTPARSPISGTPYHDGMMSPNYMLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGMGF
Sbjct: 1517 RLSPITDAQFSPYVGGMGF 1535
>gb|KZM93495.1| hypothetical protein DCAR_016740 [Daucus carota subsp. sativus]
Length = 2159
Score = 129 bits (324), Expect = 1e-30
Identities = 60/79 (75%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDC+L LNE+ML+QAID+QLPSYMDGLD GMTP RSP+ TP+HDG MSPNY SP++
Sbjct: 1456 GTGDCSLYLNEKMLKQAIDIQLPSYMDGLDFGMTPARSPISGTPYHDGMMSPNYMLSPNL 1515
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGMGF
Sbjct: 1516 RLSPITDAQFSPYVGGMGF 1534
>ref|XP_003612256.2| DNA-directed RNA polymerase [Medicago truncatula]
gb|AES95214.2| DNA-directed RNA polymerase [Medicago truncatula]
Length = 1834
Score = 124 bits (311), Expect = 5e-29
Identities = 57/79 (72%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTG+CALLLN+EML+ AI++QLPSYM+GLD GMTPGRSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGECALLLNDEMLKNAIELQLPSYMEGLDFGMTPGRSPISATPYHEGLMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPSNDAQFSPYVGGMAF 1535
>ref|XP_008361350.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1-like [Malus domestica]
Length = 1712
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1349 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1408
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1409 RLSPISDAQFSPYVGGMAF 1427
>ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x
bretschneideri]
Length = 1820
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPISDAQFSPYVGGMAF 1535
>ref|XP_009337078.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPISDAQFSPYVGGMAF 1535
>ref|XP_009363439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Pyrus x
bretschneideri]
Length = 1820
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPISDAQFSPYVGGMAF 1535
>ref|XP_008337964.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Malus domestica]
Length = 1820
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPISDAQFSPYVGGMAF 1535
>ref|XP_021819526.1| DNA-directed RNA polymerase II subunit 1 [Prunus avium]
Length = 1837
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPISDAQFSPYVGGMAF 1535
>ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Prunus mume]
Length = 1844
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPISDAQFSPYVGGMAF 1535
>ref|XP_007203058.1| DNA-directed RNA polymerase II subunit 1 [Prunus persica]
ref|XP_020423833.1| DNA-directed RNA polymerase II subunit 1 [Prunus persica]
gb|ONH97196.1| hypothetical protein PRUPE_7G175200 [Prunus persica]
Length = 1844
Score = 122 bits (306), Expect = 2e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSPNY SP++
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPISDAQFSPYVGGMAF 1535
>dbj|GAU22667.1| hypothetical protein TSUD_234890 [Trifolium subterraneum]
Length = 1209
Score = 121 bits (304), Expect = 4e-28
Identities = 56/79 (70%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTG+CALLLN+EML+ AI++QLPSYM+GLD GMTPGRSP+ TP+H+G MSP+Y SP++
Sbjct: 907 GTGECALLLNDEMLKNAIELQLPSYMEGLDFGMTPGRSPISATPYHEGLMSPSYLLSPNL 966
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 967 RLSPTNDAQFSPYVGGMAF 985
>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cicer arietinum]
Length = 1834
Score = 121 bits (304), Expect = 4e-28
Identities = 56/79 (70%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTG+CALLLN+EML+ AI++QLPSYM+GLD GMTPGRSP+ TP+H+G MSP+Y SP++
Sbjct: 1457 GTGECALLLNDEMLKNAIELQLPSYMEGLDFGMTPGRSPISATPYHEGLMSPSYLLSPNL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPTNDAQFSPYVGGMAF 1535
>ref|XP_021649879.1| DNA-directed RNA polymerase II subunit 1 [Hevea brasiliensis]
Length = 1863
Score = 121 bits (304), Expect = 4e-28
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TP+H+G MSP+Y SPS+
Sbjct: 1457 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPVSGTPYHEGMMSPSYLLSPSL 1516
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1517 RLSPITDAQFSPYVGGMAF 1535
>dbj|GAV78585.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_7
domain-containing protein/RNA_pol_Rpb1_6
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein/RNA_pol_Rpb1_R
domain-containing protein [Cephalotus follicularis]
Length = 1840
Score = 121 bits (303), Expect = 6e-28
Identities = 57/79 (72%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = +1
Query: 1 GTGDCALLLNEEMLRQAIDVQLPSYMDGLDIGMTPGRSPM--TPFHDGSMSPNYPFSPSI 174
GTGDCAL LN+EML+ AI++QLPSYMDGLD GMTP RSP+ TPFH+G MSP Y SP++
Sbjct: 1458 GTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPVSGTPFHEGMMSPGYLLSPNL 1517
Query: 175 RFSPGMDAQFSPYVGGMGF 231
R SP DAQFSPYVGGM F
Sbjct: 1518 RLSPITDAQFSPYVGGMAF 1536