BLASTX nr result

ID: Chrysanthemum21_contig00010806 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00010806
         (482 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14297.1| unnamed protein product [Coffea canephora]             54   8e-06
ref|XP_023756814.1| 40S ribosomal protein S5-like [Lactuca sativ...    54   1e-05
gb|KVH90644.1| Ribosomal protein S5/S7 [Cynara cardunculus var. ...    54   1e-05

>emb|CDP14297.1| unnamed protein product [Coffea canephora]
          Length = 211

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +3

Query: 384 QVSDTSVEDYMNSTTSKHPTYIPHKPGRYQVRR 482
           QVSD SV+DY+ +T +KHPTY+PH  GRYQV+R
Sbjct: 35  QVSDISVDDYITATAAKHPTYMPHTAGRYQVKR 67


>ref|XP_023756814.1| 40S ribosomal protein S5-like [Lactuca sativa]
 gb|PLY90623.1| hypothetical protein LSAT_6X37581 [Lactuca sativa]
          Length = 205

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = +3

Query: 384 QVSDTSVEDYMNSTTSKHPTYIPHKPGRYQVRR 482
           QVSD SVEDY+ +T SKHP Y+PH  GRYQ RR
Sbjct: 29  QVSDLSVEDYITATASKHPIYMPHTAGRYQARR 61


>gb|KVH90644.1| Ribosomal protein S5/S7 [Cynara cardunculus var. scolymus]
          Length = 205

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = +3

Query: 384 QVSDTSVEDYMNSTTSKHPTYIPHKPGRYQVRR 482
           QVSD SVEDY+ +T SKHP Y+PH  GRYQ RR
Sbjct: 29  QVSDLSVEDYITATASKHPIYMPHTAGRYQARR 61


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