BLASTX nr result

ID: Chrysanthemum21_contig00010508 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00010508
         (612 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021974251.1| protein COFACTOR ASSEMBLY OF COMPLEX C SUBUN...    64   2e-08
gb|OTG21688.1| Protein of unknown function (DUF2930) [Helianthus...    61   1e-07

>ref|XP_021974251.1| protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
           chloroplastic [Helianthus annuus]
 ref|XP_021974252.1| protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
           chloroplastic [Helianthus annuus]
          Length = 292

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/53 (60%), Positives = 39/53 (73%)
 Frame = -1

Query: 612 GTRSLLVLPMRESVDEDGSSKDKIAGYVXXXXXXXXXXXSKDRAWIAAIAKKF 454
           GTRS+LVLP+ ++ DEDG+SKDK AG+V           +KDRAWIAAIAKKF
Sbjct: 240 GTRSVLVLPVTKNRDEDGNSKDKSAGFVLLASSINYAYSNKDRAWIAAIAKKF 292


>gb|OTG21688.1| Protein of unknown function (DUF2930) [Helianthus annuus]
          Length = 299

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = -1

Query: 612 GTRSLLVLPMRESVDEDGSSKDKIAGYVXXXXXXXXXXXSKDRAWIAAIAKK 457
           GTRS+LVLP+ ++ DEDG+SKDK AG+V           +KDRAWIAAIAKK
Sbjct: 240 GTRSVLVLPVTKNRDEDGNSKDKSAGFVLLASSINYAYSNKDRAWIAAIAKK 291


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