BLASTX nr result

ID: Chrysanthemum21_contig00010471 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00010471
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY84830.1| hypothetical protein LSAT_4X90541 [Lactuca sativa]      89   3e-20

>gb|PLY84830.1| hypothetical protein LSAT_4X90541 [Lactuca sativa]
          Length = 115

 Score = 89.0 bits (219), Expect = 3e-20
 Identities = 58/119 (48%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
 Frame = +1

Query: 7   MSPAWSSHGVVTVLATTIAVSGTMIFXXXXXXXXXXXXXXIKNKDLSHAESPPQT---PR 177
           MSP WSS GVV   AT +AVSGTMI                +N D + AE+PP     PR
Sbjct: 1   MSPVWSSQGVV--FATAMAVSGTMILLSLLRSTATFSD---ENGDSNTAEAPPPPTPPPR 55

Query: 178 RRSCLSSXXXXXXXXXXVRFAENIKD--------IEYVSNCESETMDFNGARTLLVEFS 330
           RRSCLS+          VRF EN++D        IEY SNC+ ETMD NGARTLLVE S
Sbjct: 56  RRSCLSTVKKDGRMKKKVRFLENVEDTDRKAWREIEYASNCKIETMDLNGARTLLVEVS 114


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