BLASTX nr result

ID: Chrysanthemum21_contig00010352 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00010352
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI12146.1| hypothetical protein Ccrd_009459 [Cynara carduncu...    76   2e-13

>gb|KVI12146.1| hypothetical protein Ccrd_009459 [Cynara cardunculus var. scolymus]
          Length = 672

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 25/165 (15%)
 Frame = +1

Query: 1   IQKAKGISVDTIKRNTSVDGNNPSAVTNRRLTRSVLNNEGENLTTETITVGTNS------ 162
           ++K KGI  D  KR++ V+GN  S  +NRR TRS L  EGE +T  T +V          
Sbjct: 400 VKKVKGIPDDD-KRSSCVNGNKSSTASNRRFTRSALCKEGERVTIGTTSVVEKRMSTRCK 458

Query: 163 ---SSNMKRRATRSSINQDDANINTDTTKESDGDRLPP---------EQKNK-------K 285
              +S+ K +A  S  ++D   + T     ++ +  P          E+ NK        
Sbjct: 459 EYITSDHKVKADGSHTSKDKKTLFTMPLPVAENESKPNARRKVFSKMEEGNKGPKGIEGN 518

Query: 286 INTEGTNGSSNMRRRATRSSINQDAANIKTDTMKELDGDELPTEQ 420
             T  T  SSNMRR  TRS +N++AANIKT+T KE  GDE P  +
Sbjct: 519 TCTVDTKNSSNMRR-LTRSMLNKEAANIKTETTKESGGDEFPINE 562


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