BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00010324
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021989545.1| DNA-directed RNA polymerase 3B, chloroplasti...   209   6e-60
ref|XP_023730449.1| DNA-directed RNA polymerase 3, chloroplastic...   197   8e-56
ref|XP_012837864.1| PREDICTED: DNA-directed RNA polymerase 3B, c...   108   3e-24
ref|XP_015081184.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    97   2e-20
gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Erythra...    97   2e-20
ref|XP_011069583.1| DNA-directed RNA polymerase 3, chloroplastic...    97   3e-20
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    96   6e-20
ref|XP_004144791.2| PREDICTED: DNA-directed RNA polymerase 3, ch...    95   1e-19
ref|XP_008452554.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    95   1e-19
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    94   3e-19
gb|PIN02099.1| Mitochondrial/chloroplast DNA-directed RNA polyme...    93   5e-19
ref|XP_022860986.1| DNA-directed RNA polymerase 3, chloroplastic...    92   9e-19
ref|XP_023546565.1| DNA-directed RNA polymerase 3, chloroplastic...    92   2e-18
ref|XP_022158152.1| DNA-directed RNA polymerase 3, chloroplastic...    91   2e-18
ref|XP_022158151.1| DNA-directed RNA polymerase 3, chloroplastic...    91   2e-18
ref|XP_022937965.1| DNA-directed RNA polymerase 3B, chloroplasti...    90   8e-18
ref|XP_022937964.1| DNA-directed RNA polymerase 3B, chloroplasti...    90   8e-18
ref|XP_018818702.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    89   1e-17
ref|XP_023537295.1| DNA-directed RNA polymerase 3B, chloroplasti...    89   1e-17
ref|XP_022946197.1| DNA-directed RNA polymerase 3, chloroplastic...    89   1e-17

>ref|XP_021989545.1| DNA-directed RNA polymerase 3B, chloroplastic [Helianthus annuus]
 gb|OTG12251.1| putative DNA-directed RNA polymerase 3B protein [Helianthus annuus]
          Length = 986

 Score =  209 bits (532), Expect = 6e-60
 Identities = 110/166 (66%), Positives = 125/166 (75%), Gaps = 11/166 (6%)
 Frame = -1

Query: 467 STDHLQTPWSNPKVKPSK-----THL---HLFKTQSQNPLIHSNSFPHNXXXXXXXXXXX 312
           +T  LQ+PWS  KVKP K     THL    LFKT S NPLI+S+SFPHN           
Sbjct: 15  TTADLQSPWSTQKVKPRKPPKPTTHLPTLQLFKTPSLNPLIYSSSFPHNLKLPSLKHPIC 74

Query: 311 KTHS---PDAINENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKN 141
            THS   PD+I+ENFTKNLE LATLQ+ P GF+S+S+ + NPKRVY Q+PPWITSLLMKN
Sbjct: 75  STHSHPLPDSIDENFTKNLEKLATLQQIPNGFDSVSNLEMNPKRVYIQEPPWITSLLMKN 134

Query: 140 FYKNSVVFKSRVKVEFDKRNYYILRRRQIKAETEAWEKMTEEYREF 3
           FY+N+V  K RVKVE DKRNYYILRRRQIKAETEAW+KMTEEYREF
Sbjct: 135 FYRNNV--KKRVKVEIDKRNYYILRRRQIKAETEAWDKMTEEYREF 178


>ref|XP_023730449.1| DNA-directed RNA polymerase 3, chloroplastic [Lactuca sativa]
 gb|PLY76472.1| hypothetical protein LSAT_5X89101 [Lactuca sativa]
          Length = 983

 Score =  197 bits (502), Expect = 8e-56
 Identities = 104/162 (64%), Positives = 119/162 (73%), Gaps = 11/162 (6%)
 Frame = -1

Query: 455 LQTPWSNPKVKPSK-----THL---HLFKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHS 300
           LQ+PWS   +KP K     THL    LFK  SQNPLI+S+SFPHN            THS
Sbjct: 15  LQSPWSTKTIKPRKPQKPSTHLPTLQLFKHPSQNPLIYSSSFPHNLKLPSLKDPISSTHS 74

Query: 299 ---PDAINENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKN 129
              PD+ +ENFTKNLE+LATLQR   GF+S+S  + NPKRVY Q+PPWITSLLMKNFY++
Sbjct: 75  HPLPDSADENFTKNLENLATLQRITHGFDSISTPEMNPKRVYIQEPPWITSLLMKNFYRS 134

Query: 128 SVVFKSRVKVEFDKRNYYILRRRQIKAETEAWEKMTEEYREF 3
           +V  K RV+ E DKRNYYILRRRQIKAETEAWEKMTEEYREF
Sbjct: 135 NV--KKRVRFEIDKRNYYILRRRQIKAETEAWEKMTEEYREF 174


>ref|XP_012837864.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic
           [Erythranthe guttata]
          Length = 953

 Score =  108 bits (269), Expect = 3e-24
 Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 9/136 (6%)
 Frame = -1

Query: 386 SQNPLIHSNSFPHNXXXXXXXXXXXKTHSP--DAINENFTKNLESLATLQRFPTGFESLS 213
           SQ+P   S+SFP N               P  D+ ++NF  NL+ +ATLQ  P GF S +
Sbjct: 10  SQSPQFSSSSFPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQVIPNGFPS-N 68

Query: 212 DSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSR----VKVEF---DKRNYYILRRRQI 54
            + ++  RV+ QDPPWI+SL MKN     ++F+SR    VK+EF   ++R YY+LRRRQ+
Sbjct: 69  FTKESKDRVFIQDPPWISSLFMKN-----LLFRSRNRGGVKIEFQEMERRKYYLLRRRQV 123

Query: 53  KAETEAWEKMTEEYRE 6
           KAETEAWE   EEYRE
Sbjct: 124 KAETEAWENKVEEYRE 139


>ref|XP_015081184.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
           pennellii]
          Length = 1036

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 60/153 (39%), Positives = 79/153 (51%), Gaps = 7/153 (4%)
 Frame = -1

Query: 443 WSNPKVKPSKTHLHLFKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSPD---AINENFT 273
           W   +  P     H    Q    L  ++SFP               HS     + +EN T
Sbjct: 74  WRKAQKSPKNCTFHGIHNQEFLKLSQTSSFPKTLKLPIIQLPIT-VHSEVVCVSTDENLT 132

Query: 272 KNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSRVKVEF 93
           +NLE L  LQ+ P G+  +   + N KRV+ QDPPW++SL M N +  +   K  V+ EF
Sbjct: 133 ENLEELVNLQKIPNGYPLVLQKESN-KRVFIQDPPWVSSLFMNNLFVRAKQVKG-VRREF 190

Query: 92  D----KRNYYILRRRQIKAETEAWEKMTEEYRE 6
                +R Y +LRRRQIKAETEAWE+M EEYRE
Sbjct: 191 REIARRRRYAMLRRRQIKAETEAWEQMVEEYRE 223


>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Erythranthe guttata]
          Length = 941

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
 Frame = -1

Query: 386 SQNPLIHSNSFPHNXXXXXXXXXXXKTHSP--DAINENFTKNLESLATLQRFPTGFESLS 213
           SQ+P   S+SFP N               P  D+ ++NF  NL+ +ATLQ          
Sbjct: 10  SQSPQFSSSSFPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQ---------- 59

Query: 212 DSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSR----VKVEF---DKRNYYILRRRQI 54
              ++  RV+ QDPPWI+SL MKN     ++F+SR    VK+EF   ++R YY+LRRRQ+
Sbjct: 60  ---ESKDRVFIQDPPWISSLFMKN-----LLFRSRNRGGVKIEFQEMERRKYYLLRRRQV 111

Query: 53  KAETEAWEKMTEEYRE 6
           KAETEAWE   EEYRE
Sbjct: 112 KAETEAWENKVEEYRE 127


>ref|XP_011069583.1| DNA-directed RNA polymerase 3, chloroplastic [Sesamum indicum]
          Length = 952

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
 Frame = -1

Query: 386 SQNPLIHSNSFPHNXXXXXXXXXXXKTHSP--DAINENFTKNLESLATLQRFPTGFESLS 213
           SQ+P   S+ FP                 P  D  +++F    E L+TLQ  P GF+S +
Sbjct: 10  SQSPQFSSSPFPQTLKLPSIHNPAPLLPPPISDCTDDSFPGKPEKLSTLQVMPNGFQS-N 68

Query: 212 DSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSRVKVEF---DKRNYYILRRRQIKAET 42
            + ++  R + QDPPWI+SL MK+    S   +S VK+EF   ++R YY+LRRRQIKAET
Sbjct: 69  LTKESSGRGFIQDPPWISSLYMKSLLFRSKN-RSEVKIEFQETERRKYYLLRRRQIKAET 127

Query: 41  EAWEKMTEEYRE 6
           EAWE M EEYRE
Sbjct: 128 EAWENMVEEYRE 139


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
           lycopersicum]
          Length = 1007

 Score = 95.9 bits (237), Expect = 6e-20
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
 Frame = -1

Query: 287 NENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSR 108
           +EN T+NLE L  LQ+ P G+  +   + N KRV+ QDPPW++SL M N +  +   K  
Sbjct: 99  DENLTENLEELVNLQKIPNGYPLVLQKESN-KRVFIQDPPWVSSLFMNNLFVRAKQVKG- 156

Query: 107 VKVEFD----KRNYYILRRRQIKAETEAWEKMTEEYRE 6
           V+ EF     +R Y +LRRRQIKAETEAWE+M EEYRE
Sbjct: 157 VRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRE 194


>ref|XP_004144791.2| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis
           sativus]
 gb|KGN61063.1| hypothetical protein Csa_2G036610 [Cucumis sativus]
          Length = 975

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
 Frame = -1

Query: 458 HLQTPWSNPKVK---PSKTHLHLFKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSPDAI 288
           H    W  P  +     KTH     T + N  + S SFP N                D++
Sbjct: 16  HGSNAWKKPTKRWKCERKTHTSF--TSTFNSPLSSVSFPVNFDSTSQSLHLQPL--ADSV 71

Query: 287 NENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSR 108
           +ENFT+ L++   LQ   +    ++  + + KR++ QDPPWI SL +K  YK     +  
Sbjct: 72  HENFTETLDNSMNLQIPISEIHQITRGESS-KRIFIQDPPWIASLFLKGLYK---CVQKE 127

Query: 107 VKVEF---DKRNYYILRRRQIKAETEAWEKMTEEYRE 6
           VK+EF   +KR Y +LRRRQIKAETEAWEKM EEY+E
Sbjct: 128 VKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKE 164


>ref|XP_008452554.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis
           melo]
          Length = 975

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
 Frame = -1

Query: 455 LQTP--WSNPKVKPSKTHLHLFKTQSQ-----NPLIHSNSFPHNXXXXXXXXXXXKTHSP 297
           LQ P   SN   KP+K      KTQ+      N  + S SFP N                
Sbjct: 11  LQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQPFHLQPL--A 68

Query: 296 DAINENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVF 117
           D+++ENFT+ L++   LQ  PT        +++ +R++ QDPPWI SL +K  YK     
Sbjct: 69  DSVHENFTETLDNSMNLQ-IPTSEIHQITREESGQRIFIQDPPWIASLFLKGLYK---CV 124

Query: 116 KSRVKVEF---DKRNYYILRRRQIKAETEAWEKMTEEYRE 6
           +  VK+EF   +KR Y +LRRRQIKAETEAWEKM +EY+E
Sbjct: 125 QKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKE 164


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum
           tuberosum]
          Length = 1015

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
 Frame = -1

Query: 287 NENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSR 108
           +EN T+NLE L  LQ+ P G+  +   + N KRV+ QDPPW++SL M + +  +   K  
Sbjct: 107 DENLTENLEELVNLQKIPNGYPLVLQKESN-KRVFIQDPPWVSSLFMNSLFVRAKQVKG- 164

Query: 107 VKVEFD----KRNYYILRRRQIKAETEAWEKMTEEYRE 6
           V+ EF     +R Y +LRRRQIKAETEAWE+M EEYRE
Sbjct: 165 VRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRE 202


>gb|PIN02099.1| Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41
           [Handroanthus impetiginosus]
          Length = 1021

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
 Frame = -1

Query: 386 SQNPLIHSNSFPHNXXXXXXXXXXXKTHSP--DAINENFTKNLESLATLQRFPTGFESLS 213
           S +P + S+SFP N               P  DA +ENF +N E  + LQ    G+ S +
Sbjct: 10  SVSPHLSSSSFPQNLKLPSFCNPIPLLPPPVSDATDENFLENPEKFSNLQVITDGYPS-N 68

Query: 212 DSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSRVKVEF---DKRNYYILRRRQIKAET 42
            + ++   V+ QDPPWI+SL MK+    S   +S VK+E    ++R YY+LRRRQI+AET
Sbjct: 69  LTKESSAWVFIQDPPWISSLFMKSLLLRSKN-RSGVKIELKEMERRKYYLLRRRQIQAET 127

Query: 41  EAWEKMTEEYRE 6
           +AWE+M EEYRE
Sbjct: 128 DAWERMVEEYRE 139


>ref|XP_022860986.1| DNA-directed RNA polymerase 3, chloroplastic, partial [Olea
           europaea var. sylvestris]
          Length = 1001

 Score = 92.4 bits (228), Expect = 9e-19
 Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 13/167 (7%)
 Frame = -1

Query: 467 STDHLQTPWSNPK----VKPSKTHLHLFKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHS 300
           S+ H  + W   K    +  S + L +F    QNP + S SFPH                
Sbjct: 36  SSSHSSSSWKRHKNPNFLSISPSELPIF---CQNPDLSSYSFPHTLKLPTLRNAAPLLVP 92

Query: 299 P--DAINENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNS 126
           P  D+ ++N+ ++ ++L+ LQ         + + ++ KRV+ QDPPW++SL MK     S
Sbjct: 93  PLSDSADDNYVESHQNLSNLQLIT------NLTKESSKRVFIQDPPWVSSLFMK-----S 141

Query: 125 VVFKSRVKV-------EFDKRNYYILRRRQIKAETEAWEKMTEEYRE 6
           ++ +SR K        E ++R YY+LRRRQIKAETEAWE M EEY+E
Sbjct: 142 LLIRSRNKCGVKIEHKEMERRKYYLLRRRQIKAETEAWENMVEEYKE 188


>ref|XP_023546565.1| DNA-directed RNA polymerase 3, chloroplastic-like [Cucurbita pepo
           subsp. pepo]
          Length = 973

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 61/156 (39%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
 Frame = -1

Query: 458 HLQTPWSNP--KVKPSKTHLHLFKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSPDAIN 285
           H    W  P  + K  +     F + S N L  S SFP N               PD++ 
Sbjct: 17  HGGNAWRKPATRCKCDRKTYSTFNSLS-NSLRSSVSFPINFDSSAQPLRLQPL--PDSVQ 73

Query: 284 ENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSRV 105
           ENFT+ L+    LQ   +G   ++  +   +R++ +DPPWI SL +K  YK+    +  V
Sbjct: 74  ENFTETLDGSMNLQVPMSGIHHVTHGEPC-QRIFIRDPPWIGSLFLKGLYKS---VEKEV 129

Query: 104 KVEFD---KRNYYILRRRQIKAETEAWEKMTEEYRE 6
           K+EF    KR Y +LRRRQIKAETEAWEKM EEY+E
Sbjct: 130 KLEFKEIGKRKYNLLRRRQIKAETEAWEKMAEEYKE 165


>ref|XP_022158152.1| DNA-directed RNA polymerase 3, chloroplastic isoform X2 [Momordica
           charantia]
          Length = 929

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
 Frame = -1

Query: 416 KTHLHL---FKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSPDAINENFTKNLESLATL 246
           +THL     F + S +PL  S SFP N                D++ ENFT+ L++   L
Sbjct: 33  RTHLSFTSTFNSLSNSPL-SSVSFPTNSDSTAEPVRLQPL--ADSVQENFTETLDNSMNL 89

Query: 245 QRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSRVKVEF---DKRNYY 75
           Q  PT         ++ +R++ QDPPWI SL +K  YK+    +  VK+EF   +KR Y 
Sbjct: 90  Q-VPTR--------ESCQRIFIQDPPWIASLFLKGLYKS---VQKEVKLEFKEIEKRKYN 137

Query: 74  ILRRRQIKAETEAWEKMTEEYRE 6
           +LRRRQIKAETEAWE+M EEY+E
Sbjct: 138 LLRRRQIKAETEAWERMVEEYKE 160


>ref|XP_022158151.1| DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Momordica
           charantia]
          Length = 971

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
 Frame = -1

Query: 416 KTHLHL---FKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSPDAINENFTKNLESLATL 246
           +THL     F + S +PL  S SFP N                D++ ENFT+ L++   L
Sbjct: 33  RTHLSFTSTFNSLSNSPL-SSVSFPTNSDSTAEPVRLQPL--ADSVQENFTETLDNSMNL 89

Query: 245 QRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSRVKVEF---DKRNYY 75
           Q  PT         ++ +R++ QDPPWI SL +K  YK+    +  VK+EF   +KR Y 
Sbjct: 90  Q-VPTR--------ESCQRIFIQDPPWIASLFLKGLYKS---VQKEVKLEFKEIEKRKYN 137

Query: 74  ILRRRQIKAETEAWEKMTEEYRE 6
           +LRRRQIKAETEAWE+M EEY+E
Sbjct: 138 LLRRRQIKAETEAWERMVEEYKE 160


>ref|XP_022937965.1| DNA-directed RNA polymerase 3B, chloroplastic isoform X2 [Cucurbita
           moschata]
          Length = 968

 Score = 89.7 bits (221), Expect = 8e-18
 Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
 Frame = -1

Query: 458 HLQTPWSNPKVK---PSKTHLHL---FKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSP 297
           H    W  P  +     KTHL     F + S +P I S SFP N                
Sbjct: 16  HGGNAWREPTKRCKCQRKTHLSFTSSFNSLSNSP-ISSVSFPINFDSTAEPLRLQPP--A 72

Query: 296 DAINENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVF 117
           D++ ENFT+ L++   LQ   +    ++  +   +R++ +DPPWI SL +K  YK+    
Sbjct: 73  DSVQENFTEALDNSMNLQISMSEIHQITPGEPC-ERIFIRDPPWIASLFLKGLYKS---L 128

Query: 116 KSRVKVEF---DKRNYYILRRRQIKAETEAWEKMTEEYRE 6
           +  VK+EF   +KR Y +LRRRQIKAETEAWEK  EEY+E
Sbjct: 129 QKGVKLEFREIEKRKYNLLRRRQIKAETEAWEKTVEEYKE 168


>ref|XP_022937964.1| DNA-directed RNA polymerase 3B, chloroplastic isoform X1 [Cucurbita
           moschata]
          Length = 979

 Score = 89.7 bits (221), Expect = 8e-18
 Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
 Frame = -1

Query: 458 HLQTPWSNPKVK---PSKTHLHL---FKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSP 297
           H    W  P  +     KTHL     F + S +P I S SFP N                
Sbjct: 16  HGGNAWREPTKRCKCQRKTHLSFTSSFNSLSNSP-ISSVSFPINFDSTAEPLRLQPP--A 72

Query: 296 DAINENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVF 117
           D++ ENFT+ L++   LQ   +    ++  +   +R++ +DPPWI SL +K  YK+    
Sbjct: 73  DSVQENFTEALDNSMNLQISMSEIHQITPGEPC-ERIFIRDPPWIASLFLKGLYKS---L 128

Query: 116 KSRVKVEF---DKRNYYILRRRQIKAETEAWEKMTEEYRE 6
           +  VK+EF   +KR Y +LRRRQIKAETEAWEK  EEY+E
Sbjct: 129 QKGVKLEFREIEKRKYNLLRRRQIKAETEAWEKTVEEYKE 168


>ref|XP_018818702.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic isoform X2
           [Juglans regia]
          Length = 883

 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 58/157 (36%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
 Frame = -1

Query: 449 TPWSNPKVKPSKTHLHLFKTQSQN------PLIHSNSFPHNXXXXXXXXXXXKTHSPDAI 288
           T W  P    +K+H +L+   S N      P +    FP N                D++
Sbjct: 18  TTWRRPPKINTKSHKNLYFLFSSNSNTFFKPSLSPTPFPLNLKSPSNPIQLLPLS--DSV 75

Query: 287 NENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSR 108
            +N  +NLES             ++  +  P R++ QDPPWI SL +K  YK +      
Sbjct: 76  QDNLVENLESSMNSLMPINEIGQITPLESCP-RIFIQDPPWIASLFLKGLYKRT---DQE 131

Query: 107 VKVEF---DKRNYYILRRRQIKAETEAWEKMTEEYRE 6
           VK+EF   DK  Y +LRRRQIKAETEAWE+M EEYRE
Sbjct: 132 VKLEFKEMDKSKYNLLRRRQIKAETEAWERMVEEYRE 168


>ref|XP_023537295.1| DNA-directed RNA polymerase 3B, chloroplastic-like isoform X2
           [Cucurbita pepo subsp. pepo]
          Length = 972

 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
 Frame = -1

Query: 416 KTHLHL---FKTQSQNPLIHSNSFPHNXXXXXXXXXXXKTHSPDAINENFTKNLESLATL 246
           KTHL     F + S +P I S SFP N                D++ ENFT+ L++   L
Sbjct: 33  KTHLSFTSSFNSLSNSP-ISSVSFPINFDSTAEPLRLQPP--ADSVQENFTEALDNSMNL 89

Query: 245 QRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVFKSRVKVEF---DKRNYY 75
           Q   +    ++  +   +R++ +DPPWI SL +K  YK+    +  VK+EF   +KR Y 
Sbjct: 90  QISMSEIHQITPGEPC-QRIFIRDPPWIASLFLKGLYKS---LQKGVKLEFREIEKRKYN 145

Query: 74  ILRRRQIKAETEAWEKMTEEYRE 6
           +LRRRQIKAETEAWEK  EEY+E
Sbjct: 146 LLRRRQIKAETEAWEKTVEEYKE 168


>ref|XP_022946197.1| DNA-directed RNA polymerase 3, chloroplastic-like [Cucurbita
           moschata]
          Length = 973

 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
 Frame = -1

Query: 296 DAINENFTKNLESLATLQRFPTGFESLSDSDKNPKRVYFQDPPWITSLLMKNFYKNSVVF 117
           D++ ENFT+ L+    LQ   +G   ++  +   +R++ +DPPWI SL +K  YK+    
Sbjct: 70  DSVQENFTETLDGSMNLQVPMSGIHHITQGEPC-QRIFIRDPPWIGSLFLKGLYKS---V 125

Query: 116 KSRVKVEFD---KRNYYILRRRQIKAETEAWEKMTEEYRE 6
           +  VK+EF    KR Y +LRRRQIKAETEAWEKM EEY+E
Sbjct: 126 EKEVKLEFKEIGKRKYNLLRRRQIKAETEAWEKMAEEYKE 165