BLASTX nr result

ID: Chrysanthemum21_contig00010295 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00010295
         (445 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021988264.1| U3 small nucleolar RNA-associated protein 4 ...    58   8e-07
ref|XP_016550642.1| PREDICTED: U3 small nucleolar RNA-associated...    55   9e-06

>ref|XP_021988264.1| U3 small nucleolar RNA-associated protein 4 homolog [Helianthus
           annuus]
 gb|OTG10845.1| putative WD40/YVTN repeat-like-containing domain-containing protein
           [Helianthus annuus]
          Length = 795

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -1

Query: 445 LVIDKPWLQVVKTFDAQPVHRHIYGS 368
           LV+DKPWLQVVKTFDAQPVHRHIYG+
Sbjct: 770 LVVDKPWLQVVKTFDAQPVHRHIYGT 795


>ref|XP_016550642.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Capsicum annuum]
          Length = 820

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = -1

Query: 445 LVIDKPWLQVVKTFDAQPVHRHIYGS 368
           L+IDKPW+QVVKT DAQPVHRHIYG+
Sbjct: 795 LIIDKPWIQVVKTLDAQPVHRHIYGT 820


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