BLASTX nr result

ID: Chrysanthemum21_contig00010252 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00010252
         (383 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021998950.1| zinc finger CCCH domain-containing protein 5...    54   7e-06
gb|OTG06161.1| putative RNA recognition motif domain, eukaryote ...    54   7e-06

>ref|XP_021998950.1| zinc finger CCCH domain-containing protein 5 [Helianthus annuus]
 ref|XP_021998951.1| zinc finger CCCH domain-containing protein 5 [Helianthus annuus]
          Length = 648

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +3

Query: 30  HDEGVNDHRESEDERYANKQKRHKRKSATDKNNTNDRWEPDSSPIEHGNDYELSDVRKSN 209
           HD+ V    +   +    +Q R +   + DKN+ +DRW+P    IEH  DYE+SD RK  
Sbjct: 554 HDDRVEVDYQESKKAEGRRQHRPRSHESADKNDASDRWQPH---IEHDYDYEISDGRKPK 610

Query: 210 DKRSSREIGSGSV 248
           D+    E  SGSV
Sbjct: 611 DRIIDHETPSGSV 623


>gb|OTG06161.1| putative RNA recognition motif domain, eukaryote [Helianthus
           annuus]
          Length = 708

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +3

Query: 30  HDEGVNDHRESEDERYANKQKRHKRKSATDKNNTNDRWEPDSSPIEHGNDYELSDVRKSN 209
           HD+ V    +   +    +Q R +   + DKN+ +DRW+P    IEH  DYE+SD RK  
Sbjct: 614 HDDRVEVDYQESKKAEGRRQHRPRSHESADKNDASDRWQPH---IEHDYDYEISDGRKPK 670

Query: 210 DKRSSREIGSGSV 248
           D+    E  SGSV
Sbjct: 671 DRIIDHETPSGSV 683


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