BLASTX nr result

ID: Chrysanthemum21_contig00009683 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00009683
         (357 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022005346.1| ubiquitin-conjugating enzyme E2 22-like [Hel...    59   8e-08
ref|XP_023728993.1| ubiquitin-conjugating enzyme E2 22-like [Lac...    57   3e-07
gb|PLY77547.1| hypothetical protein LSAT_2X86281 [Lactuca sativa]      57   4e-07

>ref|XP_022005346.1| ubiquitin-conjugating enzyme E2 22-like [Helianthus annuus]
 gb|OTF98662.1| putative ubiquitin-conjugating enzyme/RWD-like protein [Helianthus
           annuus]
          Length = 271

 Score = 58.9 bits (141), Expect = 8e-08
 Identities = 36/58 (62%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = -2

Query: 356 LNTMKGASGQEPPTTTLNSVVDI--XXXXXXXXXXXXTHKKDGGGLVKAQADKKKIDA 189
           LN MKGASGQEPP T LN+VV+I              THKK+  GLVKAQADKKKIDA
Sbjct: 208 LNNMKGASGQEPPITALNTVVEIGVSSGSAAAPPVVVTHKKE--GLVKAQADKKKIDA 263


>ref|XP_023728993.1| ubiquitin-conjugating enzyme E2 22-like [Lactuca sativa]
 ref|XP_023728994.1| ubiquitin-conjugating enzyme E2 22-like [Lactuca sativa]
          Length = 276

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 34/62 (54%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
 Frame = -2

Query: 356 LNTMKGASGQEPPTTTLNSVVDI-----XXXXXXXXXXXXTHKKDGGGLVKAQ-ADKKKI 195
           LNTMKGASGQEPPTT LNS+V++                  H K  GGL KAQ  DKKKI
Sbjct: 207 LNTMKGASGQEPPTTALNSIVEMGVSSGSGGGAPPPTAAAAHNKKEGGLAKAQGGDKKKI 266

Query: 194 DA 189
           DA
Sbjct: 267 DA 268


>gb|PLY77547.1| hypothetical protein LSAT_2X86281 [Lactuca sativa]
          Length = 348

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 34/62 (54%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
 Frame = -2

Query: 356 LNTMKGASGQEPPTTTLNSVVDI-----XXXXXXXXXXXXTHKKDGGGLVKAQ-ADKKKI 195
           LNTMKGASGQEPPTT LNS+V++                  H K  GGL KAQ  DKKKI
Sbjct: 279 LNTMKGASGQEPPTTALNSIVEMGVSSGSGGGAPPPTAAAAHNKKEGGLAKAQGGDKKKI 338

Query: 194 DA 189
           DA
Sbjct: 339 DA 340


Top