BLASTX nr result
ID: Chrysanthemum21_contig00009357
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00009357
(1158 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVI10192.1| RNA polymerase sigma-70 [Cynara cardunculus var. ... 584 0.0
ref|XP_023761456.1| RNA polymerase sigma factor sigE, chloroplas... 564 0.0
ref|XP_021974221.1| RNA polymerase sigma factor sigE, chloroplas... 536 0.0
ref|XP_017246839.1| PREDICTED: RNA polymerase sigma factor sigE,... 438 e-148
gb|KZM98108.1| hypothetical protein DCAR_014530 [Daucus carota s... 441 e-144
ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,... 416 e-139
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,... 416 e-139
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 416 e-139
ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplas... 414 e-139
ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,... 412 e-138
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,... 412 e-138
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 410 e-137
ref|XP_016564454.1| PREDICTED: RNA polymerase sigma factor sigE,... 409 e-137
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,... 409 e-136
gb|PHT53291.1| RNA polymerase sigma factor sigE, chloroplastic/m... 408 e-136
gb|PHU23214.1| RNA polymerase sigma factor sigE, chloroplastic/m... 408 e-136
gb|PNT09192.1| hypothetical protein POPTR_012G031100v3 [Populus ... 401 e-136
ref|XP_019230135.1| PREDICTED: RNA polymerase sigma factor sigE,... 407 e-136
gb|PNT09189.1| hypothetical protein POPTR_012G031100v3 [Populus ... 400 e-135
emb|CDP05091.1| unnamed protein product [Coffea canephora] 405 e-135
>gb|KVI10192.1| RNA polymerase sigma-70 [Cynara cardunculus var. scolymus]
Length = 518
Score = 584 bits (1506), Expect = 0.0
Identities = 305/369 (82%), Positives = 330/369 (89%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA RTPFGLSARFS H +PTKR TILAFKTDKTKNTALVSS +SANLSV+TS
Sbjct: 1 MGVVTVSSSAARTPFGLSARFSTHSSPTKRTTILAFKTDKTKNTALVSSKESANLSVNTS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDH 412
K+N KR+RR+KKPSERVQA+STAEAP CSLDLDYNEAAAELDR+YKLSP TI+SDT EDH
Sbjct: 61 KENPKRIRRNKKPSERVQALSTAEAPSCSLDLDYNEAAAELDRIYKLSPTTIESDT-EDH 119
Query: 413 VSQV-KKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
QV K+ RRGR+K D +EK +R VDIVR +HK+ RLSLE RI LK+K DV VI+S
Sbjct: 120 DDQVIKRGRRGRRKISDANEKPESRTAVDIVRGQHKRLQRLSLEKRIQLKNKKDVAVITS 179
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
QKRKH K+NEDEK+NRLV++ SASTDLGSLDWKKMKIPPVLPSSEHTRLF +QTMKAI
Sbjct: 180 KQKRKHGKINEDEKVNRLVRDYSASTDLGSLDWKKMKIPPVLPSSEHTRLFISLQTMKAI 239
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
LAVKEDLQ VL REPTDGE+ADATNMNVSQLRKQIG+GQAARNKLIKHNLRLVLFVMNKY
Sbjct: 240 LAVKEDLQTVLAREPTDGEVADATNMNVSQLRKQIGVGQAARNKLIKHNLRLVLFVMNKY 299
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQEF NGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRH IIRSMTLSSF K
Sbjct: 300 FQEF-ANGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHTIIRSMTLSSFIK 358
Query: 1130 VPFGLESVR 1156
VPFGLESVR
Sbjct: 359 VPFGLESVR 367
>ref|XP_023761456.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Lactuca sativa]
ref|XP_023761457.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Lactuca sativa]
gb|PLY87284.1| hypothetical protein LSAT_4X164620 [Lactuca sativa]
Length = 515
Score = 564 bits (1453), Expect = 0.0
Identities = 300/370 (81%), Positives = 325/370 (87%), Gaps = 2/370 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA RTP GLSARFS H +P KR +ILAFKTDK KNT LVSS +SANLSVD S
Sbjct: 1 MGVVTVSSSAARTPLGLSARFSSHQSPFKRKSILAFKTDKPKNTTLVSSKESANLSVDKS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPA--TIDSDTDE 406
K+N KRLRRSKKPSERVQA+ST EAP CSLDLDYNEAAAELDRLYKLSP+ TIDSDT+
Sbjct: 61 KENPKRLRRSKKPSERVQALSTVEAPSCSLDLDYNEAAAELDRLYKLSPSPTTIDSDTN- 119
Query: 407 DHVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVIS 586
DHV KK R +KKN DT+EK TVDIVR HKK RL+LE RIHLKS+ + +I+
Sbjct: 120 DHV---KKTPRRKKKNFDTNEKLKNT-TVDIVRGHHKKLQRLTLEKRIHLKSEKNSTLIT 175
Query: 587 SNQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKA 766
SN KRK KVNEDEKINRLVK+ +ASTDLGSLDWKKMKIPPVLPSSEHTRLFKL+QTMKA
Sbjct: 176 SNLKRKQGKVNEDEKINRLVKDYTASTDLGSLDWKKMKIPPVLPSSEHTRLFKLLQTMKA 235
Query: 767 ILAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNK 946
I+ V+E+L+K LEREPTDGELA+ATNMNVSQLRKQIG+GQAARNKLIKHNLRLVLFVMNK
Sbjct: 236 IIGVREELEKTLEREPTDGELAEATNMNVSQLRKQIGIGQAARNKLIKHNLRLVLFVMNK 295
Query: 947 YFQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFF 1126
YFQEF NGRNFQDFCQAGVKGLITA+DRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFF
Sbjct: 296 YFQEF-ANGRNFQDFCQAGVKGLITAVDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFF 354
Query: 1127 KVPFGLESVR 1156
KVPFGLESVR
Sbjct: 355 KVPFGLESVR 364
>ref|XP_021974221.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Helianthus annuus]
gb|OTG21659.1| putative sigma factor E [Helianthus annuus]
Length = 506
Score = 536 bits (1381), Expect = 0.0
Identities = 285/369 (77%), Positives = 314/369 (85%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRAT-ILAFKTDKTKNTALVSSTDSANLSVDT 229
MG MTVSSSA RTPFGL+ RF HP+PTK + +LAFKTDKTKNT LVSS +SANLSVDT
Sbjct: 1 MGVMTVSSSAARTPFGLTTRFPPHPSPTKTSIMVLAFKTDKTKNTTLVSSKESANLSVDT 60
Query: 230 SKKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDED 409
K++ KR RRSKK SERVQA+STAEAPYCSLDLDY EAAAEL+R+YKLSPATI+SDT++
Sbjct: 61 PKESPKRHRRSKKSSERVQALSTAEAPYCSLDLDYLEAAAELNRIYKLSPATIESDTEDC 120
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
+V RGRKK + S+K D+VR +HK+ RL+LENRIHLK+K DV I+S
Sbjct: 121 D----SEVTRGRKKISEISKKP------DVVRGRHKRFPRLTLENRIHLKNKKDVAPITS 170
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
NQKRK K NEDEKIN LV +NS STDLGSLDWKKMKIPPVLPSSEHTRLFKL+QTMKA
Sbjct: 171 NQKRKRVKDNEDEKINMLVGDNSTSTDLGSLDWKKMKIPPVLPSSEHTRLFKLLQTMKAT 230
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+L K LEREPTDGELA+ATNM+VSQLRK IGLGQ ARNKLIKHNLRLVLFVMNKY
Sbjct: 231 LKVKEELWKALEREPTDGELAEATNMDVSQLRKHIGLGQTARNKLIKHNLRLVLFVMNKY 290
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQEF NGRNFQD CQAGVKGLITAIDRFEP RKLQLSTYALFWIRHAIIRSMTLSSF+K
Sbjct: 291 FQEF-GNGRNFQDLCQAGVKGLITAIDRFEPRRKLQLSTYALFWIRHAIIRSMTLSSFYK 349
Query: 1130 VPFGLESVR 1156
VPFGLESV+
Sbjct: 350 VPFGLESVK 358
>ref|XP_017246839.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Daucus carota subsp.
sativus]
ref|XP_017246840.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Daucus carota subsp.
sativus]
Length = 517
Score = 438 bits (1127), Expect = e-148
Identities = 240/369 (65%), Positives = 280/369 (75%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA RTP G S R SK+ PTKR +I FKTDKTKN ALV+ D+ + +++ S
Sbjct: 1 MGVVTVSSSAARTPLGSSTRLSKYSFPTKRTSISMFKTDKTKNKALVAPKDAVSSAIEKS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPAT-IDSDTDED 409
K K LR+SKKP ERVQA S AEAP C LDLDY EAAA+L+ +YKLSPA + DED
Sbjct: 61 KGKRKILRQSKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKLSPAPEVYDGQDED 120
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
H + K +R+ RKK + +EK + ++VRS+ R+SLE RI LK + V S+
Sbjct: 121 HGA--KTIRKRRKKKIEENEKKEDKRINNVVRSQKTGLRRMSLEKRIELKINKEAEVQSA 178
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
++RK NE EKINRLV+E S STDL SLDWKKMKIPPVL SSEHT LFKL+Q MKAI
Sbjct: 179 MRRRKLTGENESEKINRLVREYSVSTDLVSLDWKKMKIPPVLSSSEHTWLFKLMQPMKAI 238
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VK++LQ L REPTDGELA AT MNV QLRKQI +G+AAR+KLIKHNLRL+LFVMNKY
Sbjct: 239 LLVKDNLQNDLGREPTDGELAKATGMNVVQLRKQIAIGKAARSKLIKHNLRLILFVMNKY 298
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQEF TNG FQD CQAGVKGLITAIDRFEP R+L+LSTY+LFWIRH IIRSMTL+SF K
Sbjct: 299 FQEF-TNGPKFQDLCQAGVKGLITAIDRFEPKRRLRLSTYSLFWIRHTIIRSMTLASFTK 357
Query: 1130 VPFGLESVR 1156
V FGLESVR
Sbjct: 358 VSFGLESVR 366
>gb|KZM98108.1| hypothetical protein DCAR_014530 [Daucus carota subsp. sativus]
Length = 877
Score = 441 bits (1133), Expect = e-144
Identities = 241/370 (65%), Positives = 281/370 (75%), Gaps = 1/370 (0%)
Frame = +2
Query: 50 GMGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDT 229
GMG +TVSSSA RTP G S R SK+ PTKR +I FKTDKTKN ALV+ D+ + +++
Sbjct: 360 GMGVVTVSSSAARTPLGSSTRLSKYSFPTKRTSISMFKTDKTKNKALVAPKDAVSSAIEK 419
Query: 230 SKKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPAT-IDSDTDE 406
SK K LR+SKKP ERVQA S AEAP C LDLDY EAAA+L+ +YKLSPA + DE
Sbjct: 420 SKGKRKILRQSKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKLSPAPEVYDGQDE 479
Query: 407 DHVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVIS 586
DH + K +R+ RKK + +EK + ++VRS+ R+SLE RI LK + V S
Sbjct: 480 DHGA--KTIRKRRKKKIEENEKKEDKRINNVVRSQKTGLRRMSLEKRIELKINKEAEVQS 537
Query: 587 SNQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKA 766
+ ++RK NE EKINRLV+E S STDL SLDWKKMKIPPVL SSEHT LFKL+Q MKA
Sbjct: 538 AMRRRKLTGENESEKINRLVREYSVSTDLVSLDWKKMKIPPVLSSSEHTWLFKLMQPMKA 597
Query: 767 ILAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNK 946
IL VK++LQ L REPTDGELA AT MNV QLRKQI +G+AAR+KLIKHNLRL+LFVMNK
Sbjct: 598 ILLVKDNLQNDLGREPTDGELAKATGMNVVQLRKQIAIGKAARSKLIKHNLRLILFVMNK 657
Query: 947 YFQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFF 1126
YFQEF TNG FQD CQAGVKGLITAIDRFEP R+L+LSTY+LFWIRH IIRSMTL+SF
Sbjct: 658 YFQEF-TNGPKFQDLCQAGVKGLITAIDRFEPKRRLRLSTYSLFWIRHTIIRSMTLASFT 716
Query: 1127 KVPFGLESVR 1156
KV FGLESVR
Sbjct: 717 KVSFGLESVR 726
>ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
pennellii]
Length = 516
Score = 416 bits (1070), Expect = e-139
Identities = 224/369 (60%), Positives = 283/369 (76%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS+RFS P KR I++FK DKTKNT LVS +S +L ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-ED 409
K+N KR RR K +ERV AV T EAP +L+LDY+EAAA+L+ +YK S T +T+ +D
Sbjct: 61 KENEKRSRRVTKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
H+ VK+ R RK+ ++ E+ ++V+++ KK RL+L+ RI L + +++S
Sbjct: 120 HL--VKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLAS 177
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+++RK + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEHT LFKL+Q MKAI
Sbjct: 178 SERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAI 237
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTDGE+A+ATN++ S+LRK++ G+AARNKLIKHNLRLVLFVMNKY
Sbjct: 238 LQVKENLQNDLGREPTDGEVAEATNIDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKY 297
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F N FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIRSMT SSF K
Sbjct: 298 FQDF-ANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 356
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 357 VPFGLESIR 365
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Vitis vinifera]
emb|CBI22546.3| unnamed protein product, partial [Vitis vinifera]
Length = 518
Score = 416 bits (1070), Expect = e-139
Identities = 228/370 (61%), Positives = 277/370 (74%), Gaps = 2/370 (0%)
Frame = +2
Query: 53 MGFMTVSSSAT--RTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVD 226
MG +TVSSSA+ RTPFGL+A+FS H TP +R +LAFK DK KN ALV+ + L ++
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 227 TSKKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDE 406
TSK + KRLRR+ KPS+RV+AVST E CS++LDYNEAAA+L+ +YKLSPAT D E
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPAT-DVSEAE 119
Query: 407 DHVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVIS 586
D V++ R+ RK+ +K + ++VR +KK RLSLE RI L ++
Sbjct: 120 DLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVA 179
Query: 587 SNQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKA 766
S QK++ K NEDE I+ LV+E SASTDL SLDWKKMKIPPVLP SEH LFKL+Q MK
Sbjct: 180 SIQKKRDSK-NEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKG 238
Query: 767 ILAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNK 946
+L VK++LQK L REPTDGELA+A +M+ Q+R+ + +GQAARNKLIKHNLRLVLFV+NK
Sbjct: 239 LLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINK 298
Query: 947 YFQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFF 1126
YFQEF NG FQD CQAGVKGLITAIDRFEP R +LSTY LFWIRHAI+RSMTLSSF
Sbjct: 299 YFQEF-ANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFT 357
Query: 1127 KVPFGLESVR 1156
+V FGLESVR
Sbjct: 358 RVSFGLESVR 367
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Solanum tuberosum]
Length = 516
Score = 416 bits (1069), Expect = e-139
Identities = 222/369 (60%), Positives = 283/369 (76%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS+RFS P KR I++FK DKTKNT L++ +S +LS++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-ED 409
K+N KR RR K SERV AV+ +P +L+LDY+EAAA+L+ +YK S T S+T+ +D
Sbjct: 61 KENEKRSRRVSKRSERVHAVAIEASP-STLELDYSEAAAKLESIYKRSLETASSNTEVQD 119
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
H+ VK+ R RK+ + E+ ++V+++ K RL+L+ RI L + +++S
Sbjct: 120 HL--VKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVAS 177
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+++RK + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEH LFKL+Q MKAI
Sbjct: 178 SERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAI 237
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTDGE+A+ATNM+ S+LRK++ +G+AARNKLIKHNLRLVLFVMNKY
Sbjct: 238 LQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKY 297
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F NG FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIRSMT SSF K
Sbjct: 298 FQDF-ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 356
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 357 VPFGLESIR 365
>ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Sesamum indicum]
Length = 518
Score = 414 bits (1065), Expect = e-139
Identities = 232/369 (62%), Positives = 275/369 (74%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA RTP GL AR+ + +R IL+FK DK KN AL++ +S L ++
Sbjct: 1 MGVVTVSSSAARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAK 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDH 412
K+ KR R+ KK ERV AVST EA ++DLDYNEAAA+L+ +YK SPAT S E+
Sbjct: 61 KEKEKRSRKVKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSL--EEV 118
Query: 413 VSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVI-SS 589
Q K RR +K +E+ + D+VRSK KK+ RL+LE RI LK+ +V + SS
Sbjct: 119 KDQRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASS 178
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+QKRK K +EDEKI+RLV++ SASTDL SLDWKKMKIPPVLPSSEH LFKL+Q MKAI
Sbjct: 179 SQKRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 238
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L RE TD ELA+AT N QLRKQ+ +G+AARNKLIKHNLRLVLFVMNKY
Sbjct: 239 LQVKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 298
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F +NG FQD CQAGVKGLITAIDRFEP RK +LSTY+LFWIRHAIIRSMTLSSF K
Sbjct: 299 FQDF-SNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTK 357
Query: 1130 VPFGLESVR 1156
V FGLESVR
Sbjct: 358 VSFGLESVR 366
>ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Cucumis melo]
Length = 511
Score = 412 bits (1059), Expect = e-138
Identities = 227/370 (61%), Positives = 284/370 (76%), Gaps = 2/370 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA RTPF LSA+FS H + KR +I+AFK DK NT LVS + L V+++
Sbjct: 1 MGVVTVSSSAARTPFRLSAKFSNHGSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDH 412
++ KR + KP +RV+AV EA CSLDLDYNEAAA+L+ ++KLSP T DSD +
Sbjct: 61 NRSKKRSGNTSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDME--- 117
Query: 413 VSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISSN 592
S+ + +RG+++ S+K+ RP+ IVR+K K+ RL L+ RI LK+K S +
Sbjct: 118 -SKDGRSKRGQQR----SKKSDKRPSDGIVRNKTKRIKRLDLDKRIALKNKRKAERKSGS 172
Query: 593 --QKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKA 766
++ K K NED++I+RLV++ SASTDL SLDWKKMKIPPVLPSSEHTRLFKLVQ MKA
Sbjct: 173 FIKETKETK-NEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKA 231
Query: 767 ILAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNK 946
++ V+E+LQK L REPT+ ELA+ATNMNV Q+R+Q+ +G+AARNKLIKHNLRLVLFV+NK
Sbjct: 232 LIEVQEELQKELGREPTEAELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINK 291
Query: 947 YFQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFF 1126
YF++F T G FQD CQAGVKGLITAIDRFEP RK +LSTYALFWIRHAIIRSMTLSSF
Sbjct: 292 YFEDFAT-GPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT 350
Query: 1127 KVPFGLESVR 1156
+V FGL+SVR
Sbjct: 351 RVSFGLDSVR 360
>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana sylvestris]
ref|XP_016473301.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Nicotiana tabacum]
Length = 519
Score = 412 bits (1059), Expect = e-138
Identities = 221/369 (59%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS RFS H P KR +++FK DKTK T LV+ +S +L ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVST-AEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDED 409
K+N KR RR K +ERV AVS EA L+LDY+EAAA+L+ +YK S T SDT+
Sbjct: 61 KENEKRSRRVSKRTERVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEAK 120
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
VK+ +R RK+ + E+T ++V+++ KK RL+L+ RI L + +++S
Sbjct: 121 DHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+QKR+ + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEH LFKL+Q MKAI
Sbjct: 181 SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTD E A+ATN++ S+LRK + +G+AARNKLIKHNLRLVLFV+NKY
Sbjct: 241 LQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F NG FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIRSMT SSF K
Sbjct: 301 FQDF-ANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 360 VPFGLESIR 368
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
lycopersicum]
Length = 516
Score = 410 bits (1055), Expect = e-137
Identities = 222/369 (60%), Positives = 280/369 (75%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS+RFS P KR I++FK D TKNT LVS +S + ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-ED 409
K+N KR RR K +ERV AV T EAP +L+LDY+EAAA+L+ +YK S T +T+ +D
Sbjct: 61 KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
H+ VK+ R RK+ ++ E+ ++V+++ KK RL+L+ RI L + +++S
Sbjct: 120 HL--VKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLAS 177
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+++RK + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEHT LFKL+Q MKAI
Sbjct: 178 SERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAI 237
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTDGE+A+ATNM+ S+LRK++ G+AARNKLIKHNLRLVLFVMNKY
Sbjct: 238 LQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKY 297
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F N FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIR MT SSF K
Sbjct: 298 FQDF-ANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTK 356
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 357 VPFGLESIR 365
>ref|XP_016564454.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Capsicum annuum]
gb|PHT87446.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Capsicum annuum]
Length = 516
Score = 409 bits (1052), Expect = e-137
Identities = 221/369 (59%), Positives = 278/369 (75%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS RF+ P KR I++FK DKTKNT LV+ +S +L ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSTRFAARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-ED 409
K+N KR RR K ERV AVS P S +LDY+EAAA+L+ +YK S T S+T+ +D
Sbjct: 61 KENEKRSRRVSKRPERVHAVSMEAFPSTS-ELDYSEAAAKLESIYKRSLETASSNTEVKD 119
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
+ VK+ R RK+ + E+ ++V+++ KK RL+L+ RI L D +++S
Sbjct: 120 RL--VKRRPRTRKRIVEGDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTS 177
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+++RK + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEH LFKL+Q MKA+
Sbjct: 178 SERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAV 237
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTDGE+ADAT+M+ S+LRK++ +G+AARNKLIKHNLRLVLFVMNKY
Sbjct: 238 LQVKENLQSDLGREPTDGEVADATSMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKY 297
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F NG FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIRSMT SSF K
Sbjct: 298 FQDF-ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 356
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 357 VPFGLESIR 365
>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
ref|XP_016512797.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Nicotiana tabacum]
Length = 519
Score = 409 bits (1051), Expect = e-136
Identities = 219/369 (59%), Positives = 277/369 (75%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS FS H P KR +++FK DKTK T LV+ +S +L ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVST-AEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDED 409
K+N KR RR K +ERV AVS EA +L+LDY+EAAA+L+ +YK S T SDT+
Sbjct: 61 KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK 120
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
VK+ +R RK+ + +E+ ++V+++ KK RL+L+ RI L + +++S
Sbjct: 121 DHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+QKR+ + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEH LFKL+Q MKAI
Sbjct: 181 SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTD E+A+ATN++ S+LRK + +G+AARNKLIKHNLRLVLFV+NKY
Sbjct: 241 LQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F NG FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIRSMT SSF K
Sbjct: 301 FQDF-ANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 360 VPFGLESIR 368
>gb|PHT53291.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Capsicum baccatum]
Length = 516
Score = 408 bits (1049), Expect = e-136
Identities = 220/369 (59%), Positives = 279/369 (75%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS RF+ P KR I++FK DKTKNT LV+ +S +L ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSTRFAARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-ED 409
K+N KR RR K +RV AVS +P S +LDY+EAAA+L+ +YK S T S+T+ +D
Sbjct: 61 KENEKRSRRVSKRPDRVHAVSMEASPSTS-ELDYSEAAAKLESIYKRSLETASSNTEVKD 119
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
+ VK+ R RK+ + E+ ++V+++ KK RL+L+ RI L D +++S
Sbjct: 120 RL--VKRRPRTRKRIVEGDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTS 177
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+++RK + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEH LFKL+Q MKAI
Sbjct: 178 SERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 237
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTDG++ADAT+M+ S+LRK++ +G+AARNKLIKHNLRLVLFVMNKY
Sbjct: 238 LQVKENLQSDLGREPTDGKVADATSMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKY 297
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F NG FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIRSMT SSF K
Sbjct: 298 FQDF-ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 356
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 357 VPFGLESIR 365
>gb|PHU23214.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Capsicum chinense]
Length = 516
Score = 408 bits (1048), Expect = e-136
Identities = 222/369 (60%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS RF+ P KR I+ FK DKTKNT LV+ +S +L ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSTRFAARLCPLKRPVIVLFKKDKTKNTTLVAPKESISLPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-ED 409
K+N KR RR K ERV AVS P S +LDY+EAAA+L+ +YK S T S+T+ +D
Sbjct: 61 KENEKRSRRVSKRPERVHAVSMETFPSTS-ELDYSEAAAKLESIYKRSLETASSNTEVKD 119
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
+ VK+ R RK+ + E+ ++V+++ KK RL+L+ RI L D +++S
Sbjct: 120 RL--VKRRPRTRKRIVEGDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTS 177
Query: 590 NQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAI 769
+ +RK + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEH LFKL+Q MKAI
Sbjct: 178 SARRKLEEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 237
Query: 770 LAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKY 949
L VKE+LQ L REPTDGE+ADAT+M+ S+LRK++ +G+AARNKLIKHNLRLVLFVMNKY
Sbjct: 238 LQVKENLQSDLGREPTDGEVADATSMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKY 297
Query: 950 FQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFK 1129
FQ+F NG FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRHAIIRSMT SSF K
Sbjct: 298 FQDF-ANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 356
Query: 1130 VPFGLESVR 1156
VPFGLES+R
Sbjct: 357 VPFGLESIR 365
>gb|PNT09192.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
Length = 362
Score = 401 bits (1031), Expect = e-136
Identities = 225/367 (61%), Positives = 279/367 (76%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG ++VSSSA+RTP GLS +FS + + KR I+AFK DK+ NT+LV+ + L V+T+
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDH 412
K KRL +SKK S R++AV T +P C+L +DYNEAAA+L+ +YKLSP T SD ED
Sbjct: 61 K-GKKRLGKSKKSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDV-EDA 117
Query: 413 VSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISSN 592
+++ R+ ++K + ++T R + IVR++ KK RLSLE RI L+ K++ ++SS
Sbjct: 118 SGVIRRGRQRKRKISEGDKETEDRTSKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSA 177
Query: 593 QKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAIL 772
KRK K NE+EKI+ LV+E SASTDL SLDWKKMKIPPVL SSEH LFKL+Q MKA+L
Sbjct: 178 GKRKDRK-NENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALL 236
Query: 773 AVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKYF 952
VKE LQ+ L EPTD ELA ATNM+V Q+RKQI +G+AARNKLIKHNLRLVLFV+ KYF
Sbjct: 237 QVKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYF 296
Query: 953 QEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFKV 1132
Q+F NG FQDFCQAGVKGLITAIDRFEP R+ +LSTY LFWIRHAIIRSMTLSSF +V
Sbjct: 297 QDF-ANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRV 355
Query: 1133 PFGLESV 1153
FGLESV
Sbjct: 356 SFGLESV 362
>ref|XP_019230135.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana attenuata]
gb|OIT06417.1| rna polymerase sigma factor sige, chloroplasticmitochondrial
[Nicotiana attenuata]
Length = 518
Score = 407 bits (1045), Expect = e-136
Identities = 220/370 (59%), Positives = 277/370 (74%), Gaps = 2/370 (0%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA+R+P GLS RFS H P KR +++FK DKTK T LV+ +S +L ++TS
Sbjct: 1 MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60
Query: 233 KKNTKRLRRSKKPSERVQAVST-AEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDED 409
K+N KR RR K +ERV AVS EA +L+LDY+EAAA+L+ +YK S T SDT+
Sbjct: 61 KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK 120
Query: 410 HVSQVKKVRRGRKKNPDTSEKTATRPTVD-IVRSKHKKKHRLSLENRIHLKSKSDVPVIS 586
VK+ +R RK+ ++ A + D +V+++ KK RL+L+ RI L + +++
Sbjct: 121 DHQIVKRRQRTRKRI--VGDEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVA 178
Query: 587 SNQKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKA 766
S+Q RK + EDEKI++LV+E S +TDL SLDWKKMKIPPVLPSSEH LFKL+Q MKA
Sbjct: 179 SSQNRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKA 238
Query: 767 ILAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNK 946
IL VKE+LQ L REPTD E+A+ATN++ S+LRK + +G+AARNKLIKHNLRLVLFV+NK
Sbjct: 239 ILQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINK 298
Query: 947 YFQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFF 1126
YFQ+F NG FQD CQAGVKGLITA+DRFEP RK +LSTY LFWIRHAIIRSMT SSF
Sbjct: 299 YFQDF-ANGPKFQDLCQAGVKGLITAVDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFT 357
Query: 1127 KVPFGLESVR 1156
KVPFGLES+R
Sbjct: 358 KVPFGLESIR 367
>gb|PNT09189.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
gb|PNT09191.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
Length = 367
Score = 400 bits (1029), Expect = e-135
Identities = 224/368 (60%), Positives = 280/368 (76%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG ++VSSSA+RTP GLS +FS + + KR I+AFK DK+ NT+LV+ + L V+T+
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDH 412
K KRL +SKK S R++AV T +P C+L +DYNEAAA+L+ +YKLSP T SD ED
Sbjct: 61 K-GKKRLGKSKKSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDV-EDA 117
Query: 413 VSQVKKVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISSN 592
+++ R+ ++K + ++T R + IVR++ KK RLSLE RI L+ K++ ++SS
Sbjct: 118 SGVIRRGRQRKRKISEGDKETEDRTSKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSA 177
Query: 593 QKRKHFKVNEDEKINRLVKENSASTDLGSLDWKKMKIPPVLPSSEHTRLFKLVQTMKAIL 772
KRK K NE+EKI+ LV+E SASTDL SLDWKKMKIPPVL SSEH LFKL+Q MKA+L
Sbjct: 178 GKRKDRK-NENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALL 236
Query: 773 AVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIKHNLRLVLFVMNKYF 952
VKE LQ+ L EPTD ELA ATNM+V Q+RKQI +G+AARNKLIKHNLRLVLFV+ KYF
Sbjct: 237 QVKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYF 296
Query: 953 QEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRHAIIRSMTLSSFFKV 1132
Q+F NG FQDFCQAGVKGLITAIDRFEP R+ +LSTY LFWIRHAIIRSMTLSSF +V
Sbjct: 297 QDF-ANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRV 355
Query: 1133 PFGLESVR 1156
FGLES++
Sbjct: 356 SFGLESLQ 363
>emb|CDP05091.1| unnamed protein product [Coffea canephora]
Length = 530
Score = 405 bits (1041), Expect = e-135
Identities = 228/382 (59%), Positives = 275/382 (71%), Gaps = 14/382 (3%)
Frame = +2
Query: 53 MGFMTVSSSATRTPFGLSARFSKHPTPTKRATILAFKTDKTKNTALVSSTDSANLSVDTS 232
MG +TVSSSA R+P GL+A+ + + +R +++ FK KTKN ALV+ +S +L V+ S
Sbjct: 1 MGVVTVSSSAARSPLGLNAKLATRISQPRRPSLVPFKNGKTKNAALVAPRESLSLPVEGS 60
Query: 233 KKNTKRLRRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDH 412
N KRL+R K ERV+AVS EA +L+LDYNEAAA+L+ +YKLSPAT SD + +
Sbjct: 61 NVNEKRLKRVVKRPERVKAVSALEAASSTLELDYNEAAAKLENIYKLSPATKVSDMEVND 120
Query: 413 VSQVK-KVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLSLENRIHLKSKSDVPVISS 589
+ + + RR R K + + T TV VRS KK RLSL+ R+ L+ K D ISS
Sbjct: 121 LGMKRDQQRRKRMKEANVEAEKGTNYTV--VRSPRKKSKRLSLDKRVTLRKKRDSEAISS 178
Query: 590 NQKRKHFKVNEDE-------------KINRLVKENSASTDLGSLDWKKMKIPPVLPSSEH 730
+QKRK + +EDE KINRL++E S STD SLDWKKMKIPPVLPSSEH
Sbjct: 179 SQKRKSSEGDEDEEINRKSSEDDEDEKINRLLREYSGSTDFTSLDWKKMKIPPVLPSSEH 238
Query: 731 TRLFKLVQTMKAILAVKEDLQKVLEREPTDGELADATNMNVSQLRKQIGLGQAARNKLIK 910
+ LFKL+Q MKAI+ VKE+L L REPTDGELA+ATN++V LRK I +GQAARNKLIK
Sbjct: 239 SWLFKLMQPMKAIIQVKENLPNDLGREPTDGELAEATNLDVLHLRKDIKVGQAARNKLIK 298
Query: 911 HNLRLVLFVMNKYFQEFTTNGRNFQDFCQAGVKGLITAIDRFEPGRKLQLSTYALFWIRH 1090
HNLRLVLFVMNKYFQ+F TNG FQD CQAGVKGLITAIDRFEP RK +LSTY LFWIRH
Sbjct: 299 HNLRLVLFVMNKYFQDF-TNGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRH 357
Query: 1091 AIIRSMTLSSFFKVPFGLESVR 1156
AIIRSMTLSS KV FGL+SVR
Sbjct: 358 AIIRSMTLSSLTKVSFGLDSVR 379