BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00008885
         (2420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08103.1| Plus-3 [Cynara cardunculus var. scolymus]              782   0.0  
ref|XP_023738328.1| protein RTF1 homolog [Lactuca sativa] >gi|13...   748   0.0  
ref|XP_021987765.1| protein RTF1 homolog isoform X2 [Helianthus ...   746   0.0  
ref|XP_021987764.1| protein RTF1 homolog isoform X1 [Helianthus ...   746   0.0  
gb|OMO76468.1| Plus-3 [Corchorus capsularis]                          627   0.0  
gb|OMO65136.1| Plus-3 [Corchorus olitorius]                           622   0.0  
gb|PON36800.1| RNA polymerase-associated protein Rtf [Parasponia...   616   0.0  
ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Zi...   615   0.0  
ref|XP_023924078.1| protein RTF1 homolog [Quercus suber]              615   0.0  
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: protein RTF1...   615   0.0  
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...   615   0.0  
ref|XP_009378467.1| PREDICTED: protein RTF1 homolog [Pyrus x bre...   613   0.0  
ref|XP_007025691.2| PREDICTED: protein RTF1 homolog [Theobroma c...   613   0.0  
ref|XP_012091565.1| protein RTF1 homolog [Jatropha curcas] >gi|6...   613   0.0  
ref|XP_009347098.1| PREDICTED: protein RTF1 homolog [Pyrus x bre...   613   0.0  
ref|XP_008382360.1| PREDICTED: protein RTF1 homolog [Malus domes...   613   0.0  
gb|PON96093.1| RNA polymerase-associated protein Rtf [Trema orie...   612   0.0  
ref|XP_020415112.1| protein RTF1 homolog [Prunus persica] >gi|11...   612   0.0  
ref|XP_022715913.1| protein RTF1 homolog [Durio zibethinus] >gi|...   611   0.0  
ref|XP_021827153.1| LOW QUALITY PROTEIN: protein RTF1 homolog [P...   610   0.0  

>gb|KVI08103.1| Plus-3 [Cynara cardunculus var. scolymus]
          Length = 638

 Score =  782 bits (2020), Expect = 0.0
 Identities = 404/535 (75%), Positives = 438/535 (81%), Gaps = 11/535 (2%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQKDKSNQSRKDTSPPHTAN 727
            LYKGEEDR+RLAKMSELDREMILA+R+ K+NDKDLKN+IKKQK+KS QSRKD+ PPHT N
Sbjct: 105  LYKGEEDRQRLAKMSELDREMILAERATKKNDKDLKNSIKKQKEKSTQSRKDSPPPHTVN 164

Query: 728  RTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRRG-------- 883
            R +RSSARS DRA  A D             QQDPES  KRRD D+  KR+G        
Sbjct: 165  RAVRSSARSTDRAT-AIDVALNELRARKRLRQQDPESHRKRRDADTGVKRKGFTPAALST 223

Query: 884  -GFTIDTXXXXXXXXXXXXXXXXNVKISEESTNLTYEDVKGITIRRSKLAKWFMEPFFED 1060
               +                   + K+S EST L YEDVKGITIRRSKLAKWFMEPFFE+
Sbjct: 224  SSHSDSGSHSEDEESTGGMGESDDEKVSRESTILMYEDVKGITIRRSKLAKWFMEPFFEE 283

Query: 1061 LIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYLNVVWGNESSAAR 1240
            LIVGCFVRVGIGKSK+GPIYRLCIVRNVDAADPDRQYKLEN+MTHKYLNVVWGNE+SAAR
Sbjct: 284  LIVGCFVRVGIGKSKSGPIYRLCIVRNVDAADPDRQYKLENKMTHKYLNVVWGNENSAAR 343

Query: 1241 WQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQML 1420
            WQMAMISDSPP+KEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQML
Sbjct: 344  WQMAMISDSPPLKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQML 403

Query: 1421 QEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXXSRQPQQKDAKAI 1600
            QEKKSTIRRP+NVAAEKDRLRR++EVAQMKH++               SRQ QQKD KAI
Sbjct: 404  QEKKSTIRRPLNVAAEKDRLRREMEVAQMKHDETEVEKIKAKLHELEASRQTQQKDKKAI 463

Query: 1601 KLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYYVSKPGEAAAEAN 1780
            +LAEMNRKNRVENFKNASE+KP++ GLKAGEAGYDPFSRRWTRSRNYYVSKPGEAAAEAN
Sbjct: 464  RLAEMNRKNRVENFKNASEMKPVSVGLKAGEAGYDPFSRRWTRSRNYYVSKPGEAAAEAN 523

Query: 1781 GGDTQAAAVVGPDG--VGIVXXXXXXXXXXXXGKLVDTSAPVDQGTESNVLHDFEIPISL 1954
            GGD Q AA+VGPDG   GIV            GKLVDTSAPVD+GTESN++HDF++PISL
Sbjct: 524  GGDAQTAAIVGPDGSKAGIVATVAALEAAADAGKLVDTSAPVDKGTESNIVHDFDLPISL 583

Query: 1955 TALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 2119
             +LQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL
Sbjct: 584  ASLQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 638


>ref|XP_023738328.1| protein RTF1 homolog [Lactuca sativa]
 gb|PLY70294.1| hypothetical protein LSAT_2X40361 [Lactuca sativa]
          Length = 632

 Score =  748 bits (1930), Expect = 0.0
 Identities = 391/533 (73%), Positives = 425/533 (79%), Gaps = 9/533 (1%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQKDKSNQSRKDTSPPHTAN 727
            LYKGEEDR++LAKMSEL+RE ILA+R+NK+NDKDLKN IKKQ +KSNQ RKD+ P HT N
Sbjct: 106  LYKGEEDRQKLAKMSELEREQILAERANKKNDKDLKNRIKKQTEKSNQ-RKDSPPTHTVN 164

Query: 728  RTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRR--------- 880
            R +RSSARSADRA  AKD             QQDPES+WKRRD +S  KR+         
Sbjct: 165  RAVRSSARSADRAA-AKDGALNELRARKRLRQQDPESNWKRRDTESTVKRKTFTPAPLSN 223

Query: 881  GGFTIDTXXXXXXXXXXXXXXXXNVKISEESTNLTYEDVKGITIRRSKLAKWFMEPFFED 1060
               +                   + K+S+ES+ L YEDVKGITIRRSKLAKWFMEPFFE+
Sbjct: 224  SSRSDSGSHSEDEDSTGEMGDSDDEKMSKESSILKYEDVKGITIRRSKLAKWFMEPFFEE 283

Query: 1061 LIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYLNVVWGNESSAAR 1240
            LIVGCFVRVGIGKSK+GPIYRLCIVRNVDAADPD+QYKLEN+MTHKYLNVVWGNE+SAAR
Sbjct: 284  LIVGCFVRVGIGKSKSGPIYRLCIVRNVDAADPDKQYKLENKMTHKYLNVVWGNENSAAR 343

Query: 1241 WQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQML 1420
            WQMAMISDSPP+KEEFDQLIREV+RHGGRMPSKQEVLEKREAIEKTN+FVYSAETVKQML
Sbjct: 344  WQMAMISDSPPLKEEFDQLIREVDRHGGRMPSKQEVLEKREAIEKTNTFVYSAETVKQML 403

Query: 1421 QEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXXSRQPQQKDAKAI 1600
            QEKKSTIRRP+NVAAEKDRLRRD+EVA+ K +                SRQ QQKD KAI
Sbjct: 404  QEKKSTIRRPLNVAAEKDRLRRDIEVAKAKQDYAEVEKIEAKLLELEASRQTQQKDKKAI 463

Query: 1601 KLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYYVSKPGEAAAEAN 1780
            +LAEMNRKNRVENFKNASEVKP+A GLKAGEAGYDPFSRRWTRSRNYYV KPGE A E N
Sbjct: 464  RLAEMNRKNRVENFKNASEVKPVATGLKAGEAGYDPFSRRWTRSRNYYVPKPGEGAGEGN 523

Query: 1781 GGDTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSAPVDQGTESNVLHDFEIPISLTA 1960
            GG    A V    G G+V            GKLVDTSAPVDQGTESN+LHDFE+PISLT 
Sbjct: 524  GGQAAEAVV----GGGVVATVAALEAAADAGKLVDTSAPVDQGTESNMLHDFELPISLTM 579

Query: 1961 LQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 2119
            LQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL
Sbjct: 580  LQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 632


>ref|XP_021987765.1| protein RTF1 homolog isoform X2 [Helianthus annuus]
          Length = 638

 Score =  746 bits (1925), Expect = 0.0
 Identities = 395/535 (73%), Positives = 430/535 (80%), Gaps = 11/535 (2%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIK--KQKDKSNQSRKDTSPPHT 721
            LYK EEDR+RLAKMSEL+REMILADR+ KRNDKDLKN +K  KQK+KSNQSRKD  PPHT
Sbjct: 110  LYKNEEDRKRLAKMSELEREMILADRATKRNDKDLKNTLKDKKQKEKSNQSRKDNPPPHT 169

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRRGGFTIDT 901
            A   +RSSAR  DRA   KD             QQDPES WKR+D DS  K++G FT   
Sbjct: 170  AK--LRSSAR-LDRAD-KKDGALNQLRNKKMQRQQDPESRWKRKDTDSIGKQKG-FTGAL 224

Query: 902  XXXXXXXXXXXXXXXXNVKIS--------EESTNLTYEDVKGITIRRSKLAKWFMEPFFE 1057
                            +V+ +         +S+ LTYEDVKGITIRRSKLAKWFMEPFFE
Sbjct: 225  STASRSVSGSQSEDEDSVRETGDTDDENVSDSSTLTYEDVKGITIRRSKLAKWFMEPFFE 284

Query: 1058 DLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYLNVVWGNESSAA 1237
            +LI+GCFVRVGIGKSK+GPIYRLCIVRNVDAADPDRQYKLEN+MTHKYLNVVWGNESSAA
Sbjct: 285  ELIIGCFVRVGIGKSKSGPIYRLCIVRNVDAADPDRQYKLENKMTHKYLNVVWGNESSAA 344

Query: 1238 RWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQM 1417
            RWQMAMISDSPP+KEEFDQL+REV+RHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQM
Sbjct: 345  RWQMAMISDSPPVKEEFDQLLREVDRHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQM 404

Query: 1418 LQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXXSRQPQQKDAKA 1597
            LQEKKSTIRRP+NVAAEKDRLRRD+E AQMKH++               SRQ Q+KD KA
Sbjct: 405  LQEKKSTIRRPLNVAAEKDRLRRDMEFAQMKHDEAEVEKIKARLQELEASRQGQEKDKKA 464

Query: 1598 IKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYYVSKPGE-AAAE 1774
            I+LAEMNRKNRVENFKNASE+KP+  GLKAGEAGYDPFSRRWTRSRNYYVSKPGE AA E
Sbjct: 465  IRLAEMNRKNRVENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPGETAAGE 524

Query: 1775 ANGGDTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSAPVDQGTESNVLHDFEIPISL 1954
            ANGGD Q AA VGP   G+V            GKLVDT+APVDQGTESN+LHDF++PISL
Sbjct: 525  ANGGDAQTAAGVGPK-AGLVATAAALEAAADAGKLVDTNAPVDQGTESNMLHDFDLPISL 583

Query: 1955 TALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 2119
             +LQKFGG HGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL
Sbjct: 584  ASLQKFGGAHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 638


>ref|XP_021987764.1| protein RTF1 homolog isoform X1 [Helianthus annuus]
 gb|OTG10277.1| putative plus-3 domain-containing protein [Helianthus annuus]
          Length = 641

 Score =  746 bits (1925), Expect = 0.0
 Identities = 395/535 (73%), Positives = 430/535 (80%), Gaps = 11/535 (2%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIK--KQKDKSNQSRKDTSPPHT 721
            LYK EEDR+RLAKMSEL+REMILADR+ KRNDKDLKN +K  KQK+KSNQSRKD  PPHT
Sbjct: 113  LYKNEEDRKRLAKMSELEREMILADRATKRNDKDLKNTLKDKKQKEKSNQSRKDNPPPHT 172

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRRGGFTIDT 901
            A   +RSSAR  DRA   KD             QQDPES WKR+D DS  K++G FT   
Sbjct: 173  AK--LRSSAR-LDRAD-KKDGALNQLRNKKMQRQQDPESRWKRKDTDSIGKQKG-FTGAL 227

Query: 902  XXXXXXXXXXXXXXXXNVKIS--------EESTNLTYEDVKGITIRRSKLAKWFMEPFFE 1057
                            +V+ +         +S+ LTYEDVKGITIRRSKLAKWFMEPFFE
Sbjct: 228  STASRSVSGSQSEDEDSVRETGDTDDENVSDSSTLTYEDVKGITIRRSKLAKWFMEPFFE 287

Query: 1058 DLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYLNVVWGNESSAA 1237
            +LI+GCFVRVGIGKSK+GPIYRLCIVRNVDAADPDRQYKLEN+MTHKYLNVVWGNESSAA
Sbjct: 288  ELIIGCFVRVGIGKSKSGPIYRLCIVRNVDAADPDRQYKLENKMTHKYLNVVWGNESSAA 347

Query: 1238 RWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQM 1417
            RWQMAMISDSPP+KEEFDQL+REV+RHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQM
Sbjct: 348  RWQMAMISDSPPVKEEFDQLLREVDRHGGRMPSKQEVLEKREAIEKTNSFVYSAETVKQM 407

Query: 1418 LQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXXSRQPQQKDAKA 1597
            LQEKKSTIRRP+NVAAEKDRLRRD+E AQMKH++               SRQ Q+KD KA
Sbjct: 408  LQEKKSTIRRPLNVAAEKDRLRRDMEFAQMKHDEAEVEKIKARLQELEASRQGQEKDKKA 467

Query: 1598 IKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYYVSKPGE-AAAE 1774
            I+LAEMNRKNRVENFKNASE+KP+  GLKAGEAGYDPFSRRWTRSRNYYVSKPGE AA E
Sbjct: 468  IRLAEMNRKNRVENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPGETAAGE 527

Query: 1775 ANGGDTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSAPVDQGTESNVLHDFEIPISL 1954
            ANGGD Q AA VGP   G+V            GKLVDT+APVDQGTESN+LHDF++PISL
Sbjct: 528  ANGGDAQTAAGVGPK-AGLVATAAALEAAADAGKLVDTNAPVDQGTESNMLHDFDLPISL 586

Query: 1955 TALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 2119
             +LQKFGG HGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL
Sbjct: 587  ASLQKFGGAHGVQAGFMARKQRIEATVGCQVPENDGRRHALTLSVSDYKRRRGLL 641


>gb|OMO76468.1| Plus-3 [Corchorus capsularis]
          Length = 659

 Score =  627 bits (1617), Expect = 0.0
 Identities = 341/556 (61%), Positives = 394/556 (70%), Gaps = 32/556 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNI--KKQKDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL+REMIL++R++KR DK     I  K+ KD+ N+SRK+T PP  
Sbjct: 108  LYKNEDDRRQLAQMSELEREMILSERADKRGDKKFTEKIRSKRDKDRPNRSRKET-PPLP 166

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK--------R 877
            ++R +RSSARSADRA    D             QQDPE+  K RD    +         +
Sbjct: 167  SSRGVRSSARSADRAAAKDDALNELRAKRLK--QQDPEARRKLRDASRGSTGSRGLSPVK 224

Query: 878  RGGFTIDTXXXXXXXXXXXXXXXXNVKISEESTNL--------------TYEDVKGITIR 1015
            R  FT  +                +   + +   +              T+ED+K ITIR
Sbjct: 225  RKSFTASSLSSSSQSESESRSNSEDEGSTGDGAMVDSDDDRGTRGPDGPTFEDIKEITIR 284

Query: 1016 RSKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTH 1195
            RSKLAKWFMEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA+DPDR YKLEN+ TH
Sbjct: 285  RSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDASDPDRTYKLENKTTH 344

Query: 1196 KYLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEK 1375
            KYLNVVWGNESSAARWQMAMISDSPP +EEF QLIREVER GGRMPS Q+V EK++A++K
Sbjct: 345  KYLNVVWGNESSAARWQMAMISDSPPQEEEFKQLIREVERSGGRMPSNQDVQEKKDALQK 404

Query: 1376 TNSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXX 1555
              +FVYSA TVKQMLQEKKST  RP+N+AAEKDRLRR+L++AQ KH+D            
Sbjct: 405  AKTFVYSAATVKQMLQEKKSTTSRPLNIAAEKDRLRRELDIAQSKHDDAEVERIKKRLQQ 464

Query: 1556 XXXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSR 1735
               SRQ Q KDAKA++LAEMNRKNRVENF+NASE+KP+  GLKAGEAGYDPFSRRWTRSR
Sbjct: 465  LEASRQSQGKDAKAVRLAEMNRKNRVENFRNASELKPVNTGLKAGEAGYDPFSRRWTRSR 524

Query: 1736 NYYVSKPGEAAAEANGGDTQAAAVVGPDG--------VGIVXXXXXXXXXXXXGKLVDTS 1891
            NYYV  PG  AA A  GDT   AV   +G        VG              GKLVDTS
Sbjct: 525  NYYVKPPGGDAAAATNGDTN-GAVPSENGNDARAVAEVGRAATVAALQQAAGAGKLVDTS 583

Query: 1892 APVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRH 2071
            APVD+GTESN+LHDFEIPISLT LQKFGGP G  AGFMARKQRIEATVGC VPENDGRRH
Sbjct: 584  APVDEGTESNLLHDFEIPISLTQLQKFGGPQGAVAGFMARKQRIEATVGCHVPENDGRRH 643

Query: 2072 ALTLSVSDYKRRRGLL 2119
            ALTL+VSDYKRRRGLL
Sbjct: 644  ALTLTVSDYKRRRGLL 659


>gb|OMO65136.1| Plus-3 [Corchorus olitorius]
          Length = 656

 Score =  622 bits (1605), Expect = 0.0
 Identities = 338/552 (61%), Positives = 390/552 (70%), Gaps = 28/552 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNI--KKQKDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL+REMIL++R++KR DK     I  K+  D+ N+SRK+T PP  
Sbjct: 108  LYKNEDDRRQLAQMSELEREMILSERADKRGDKKFTEKIRSKRDNDRPNRSRKET-PPLP 166

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK--------R 877
            ++R +RSSARSADRA    D             QQDPE+  K RD              +
Sbjct: 167  SSRGVRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGGTGSRGLSPVK 224

Query: 878  RGGFTIDTXXXXXXXXXXXXXXXXNVKISEESTNL--------------TYEDVKGITIR 1015
            R  FT  +                +   + +   +              T+ED+K ITIR
Sbjct: 225  RKSFTASSLSSSSQSESESRSNSEDEGSTGDGAMVDSDDDRGTRGPDGPTFEDIKEITIR 284

Query: 1016 RSKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTH 1195
            RSKLAKWFMEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA+DPDR YKLEN+ TH
Sbjct: 285  RSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDASDPDRTYKLENKTTH 344

Query: 1196 KYLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEK 1375
            KYLNVVWGNESSAARWQMAMISDSPP +EEF QLIREVER GGRMPS Q+V EK++A++K
Sbjct: 345  KYLNVVWGNESSAARWQMAMISDSPPQEEEFKQLIREVERSGGRMPSNQDVQEKKDALQK 404

Query: 1376 TNSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXX 1555
              +FVYSA TVKQMLQEKKST  RP+N+AAEKDRLRR+L++AQ KH+D            
Sbjct: 405  AKTFVYSAATVKQMLQEKKSTTSRPLNIAAEKDRLRRELDIAQSKHDDAEVERIKKRLQQ 464

Query: 1556 XXXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSR 1735
               SRQ Q KDAKA++LAEMNRKNRVENF+NASE+KP+  GLKAGEAGYDPFSRRWTRSR
Sbjct: 465  LEASRQSQGKDAKAVRLAEMNRKNRVENFRNASELKPVNTGLKAGEAGYDPFSRRWTRSR 524

Query: 1736 NYYVSKPGEAAAEANGGDTQAA--AVVGPD--GVGIVXXXXXXXXXXXXGKLVDTSAPVD 1903
            NYYV  PG   A A  GDT  A  +  G D   VG              GKLVDTSAPVD
Sbjct: 525  NYYVKPPGGDTAAATNGDTNGAVPSENGNDARAVGRAATVAALQEAAGAGKLVDTSAPVD 584

Query: 1904 QGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHALTL 2083
            +GTESN+LHDFEIPISL  LQKFGGP G  AGFMARKQRIEATVGC VPENDGRRHALTL
Sbjct: 585  EGTESNLLHDFEIPISLAQLQKFGGPQGAVAGFMARKQRIEATVGCHVPENDGRRHALTL 644

Query: 2084 SVSDYKRRRGLL 2119
            +VSDYKRRRGLL
Sbjct: 645  TVSDYKRRRGLL 656


>gb|PON36800.1| RNA polymerase-associated protein Rtf [Parasponia andersonii]
          Length = 658

 Score =  616 bits (1589), Expect = 0.0
 Identities = 340/557 (61%), Positives = 397/557 (71%), Gaps = 33/557 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQ---KDKSNQSRKDTSPPH 718
            LYK E+DRR+LA+M+EL REMIL DR++K+ DK+LK  ++ +   K KS QSRK T PP 
Sbjct: 106  LYKDEDDRRKLAEMTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKSQQSRKST-PPL 164

Query: 719  TANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK-------- 874
             ++R +RSSARSADRA    D             QQDPE+  K RD    +         
Sbjct: 165  QSSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGNRNFLNN 221

Query: 875  RRGGFTI---------DTXXXXXXXXXXXXXXXXNVKISEE---STNLTYEDVKGITIRR 1018
            +R  FT          D+                 +   +E   S   T+ED+K ITIRR
Sbjct: 222  KRKSFTATSVSSSSRSDSESQSRSEDEGSTGDGGMIDSDDERPGSDGPTFEDIKEITIRR 281

Query: 1019 SKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHK 1198
            SKLAKWFMEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA DPDRQYKLEN+ THK
Sbjct: 282  SKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDATDPDRQYKLENKNTHK 341

Query: 1199 YLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKT 1378
            YLNVVWGNE+SAARWQMAM+SDS PI+EEF Q +REVER+GGRMP+KQ++LEK+EAI+K 
Sbjct: 342  YLNVVWGNENSAARWQMAMVSDSAPIEEEFKQWVREVERNGGRMPTKQDLLEKKEAIKKI 401

Query: 1379 NSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXX 1558
            N+FVYSA TVKQMLQEKKS   RP+NVA EKDRLRR+LEVAQ K+++             
Sbjct: 402  NTFVYSAATVKQMLQEKKSASSRPLNVALEKDRLRRELEVAQSKNDEAEVERIKRRLAEL 461

Query: 1559 XXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRN 1738
              SR+ +  DAKAI+LAEMNRKNRVENFKNASE+KP+   LKAGEAGYDPFSRRWTRSRN
Sbjct: 462  DASRKAKVSDAKAIRLAEMNRKNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRN 521

Query: 1739 YYVSKPGEAAAEANG--GDTQAAAVVGPDG--------VGIVXXXXXXXXXXXXGKLVDT 1888
            YYVSKPGEA  +     G+  A+A V  +G        VG+             GKLVDT
Sbjct: 522  YYVSKPGEAKGDVGAIPGNNGASAEVESNGRGGVVAADVGMAATAAALEAAADAGKLVDT 581

Query: 1889 SAPVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRR 2068
            SAPVDQGT SNVLH+FE+PISL  LQKFGGP G QAGFMARKQRIEATVGC+VPENDGRR
Sbjct: 582  SAPVDQGTVSNVLHNFELPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRR 641

Query: 2069 HALTLSVSDYKRRRGLL 2119
            HALTL+VSDYKRRRGLL
Sbjct: 642  HALTLTVSDYKRRRGLL 658


>ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Ziziphus jujuba]
          Length = 638

 Score =  615 bits (1587), Expect = 0.0
 Identities = 338/555 (60%), Positives = 394/555 (70%), Gaps = 31/555 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNI--KKQKDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+M+ELDREMIL DR+ K+ D++LK  +  K +K K+ QSRK+T PP  
Sbjct: 89   LYKDEDDRRKLAEMTELDREMILLDRATKKEDRNLKEKLRPKWEKGKTTQSRKET-PPLP 147

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK--------R 877
            ++R +RSSARSADRA    D             QQDPE+  K RD    +          
Sbjct: 148  SSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGSRSFSHTN 204

Query: 878  RGGFTI---------DTXXXXXXXXXXXXXXXXNVKISEE-----STNLTYEDVKGITIR 1015
            R  FT          ++                 +   +E     S   T++D++ ITIR
Sbjct: 205  RKSFTAASLSSSSQSESESGSGSEDEGSTGDGGMIDSDDERGMPGSEGPTFDDIREITIR 264

Query: 1016 RSKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTH 1195
            RSKLAKW MEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA DPDRQY+LEN+ T+
Sbjct: 265  RSKLAKWIMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDATDPDRQYRLENKTTY 324

Query: 1196 KYLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEK 1375
            KYLNVVWGNE+SAARWQMAM+SDS PI+EEF Q +REVER GGRMPSKQ+VLEK+EAI+K
Sbjct: 325  KYLNVVWGNENSAARWQMAMVSDSAPIEEEFKQWVREVERSGGRMPSKQDVLEKKEAIKK 384

Query: 1376 TNSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXX 1555
             NSFVYSA TVKQMLQEKKS   RP N+A EKDRLRR+LEVAQ KH++            
Sbjct: 385  INSFVYSAATVKQMLQEKKSASSRPFNIALEKDRLRRELEVAQSKHDEMEVERIKTRLQE 444

Query: 1556 XXXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSR 1735
               SR+  + DAKAI+LAEMNRKNR ENFKNASE+KP+   LKAGEAGYDPFSRRWTRSR
Sbjct: 445  LEASRKAHENDAKAIRLAEMNRKNRAENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSR 504

Query: 1736 NYYVSKPGEA-------AAEANGGDTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSA 1894
            NYYVSKPGE        AAE NG   + A+  G    G+V            GKLVDTSA
Sbjct: 505  NYYVSKPGETKESVEANAAENNGASAEVAS-NGTALAGMVATVAALEAAADAGKLVDTSA 563

Query: 1895 PVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHA 2074
            PVDQGTESN+LH+FE+PISLT LQKFGGP G QAGFMARKQRIEATVGC+VPENDGRRHA
Sbjct: 564  PVDQGTESNLLHNFELPISLTTLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHA 623

Query: 2075 LTLSVSDYKRRRGLL 2119
            LTL+VSDYKRRRGLL
Sbjct: 624  LTLTVSDYKRRRGLL 638


>ref|XP_023924078.1| protein RTF1 homolog [Quercus suber]
          Length = 658

 Score =  615 bits (1586), Expect = 0.0
 Identities = 330/558 (59%), Positives = 398/558 (71%), Gaps = 34/558 (6%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQKD--KSNQSRKDTSPPHT 721
            LYK E+DRR+LA+M+EL+REMIL+DR++K+NDK+L+  I+ ++D  K+ QSRK+T PP  
Sbjct: 106  LYKNEDDRRKLAQMTELEREMILSDRASKKNDKNLREKIRSKRDSGKTTQSRKET-PPLP 164

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRRGGFTIDT 901
             +R +R + RSADR+  AKD             QQDPE+  K RD    +     F+   
Sbjct: 165  QSR-LRLTPRSADRS--AKDDALNELRAKRLK-QQDPEAHRKLRDASRGSSGNRTFSPKR 220

Query: 902  XXXXXXXXXXXXXXXXNVKISEESTNLT---------------------YEDVKGITIRR 1018
                              +   E    T                     ++D+K ITIRR
Sbjct: 221  KTFTRPSVSSSSQSESESRSHSEDEGSTGDGAMVDSDDERGMSGSEVPSFDDIKEITIRR 280

Query: 1019 SKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHK 1198
            SKL KWFMEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA +PDRQY+LEN+ T+K
Sbjct: 281  SKLGKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLCLVRNVDATEPDRQYRLENKTTYK 340

Query: 1199 YLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKT 1378
            YLNV+WGNESSAARWQMAM+SDS P++EE+ Q I+EVER GGRMPSKQ+VLEK+EAI+KT
Sbjct: 341  YLNVIWGNESSAARWQMAMVSDSAPLEEEYKQWIKEVERSGGRMPSKQDVLEKKEAIKKT 400

Query: 1379 NSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXX 1558
            N++VYSA TVKQMLQEKKS++ RP+NVAAEKDRLRR+LE+AQ KH++             
Sbjct: 401  NTYVYSAATVKQMLQEKKSSLSRPLNVAAEKDRLRRELEIAQSKHDEAEVGRIKTRLQQL 460

Query: 1559 XXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRN 1738
              SRQ Q+KD KA++LAEMNRKNRVENFKNASE+KP+  GLKAGEAGYDPFSRRWTRSRN
Sbjct: 461  EASRQTQEKDTKAMRLAEMNRKNRVENFKNASELKPINTGLKAGEAGYDPFSRRWTRSRN 520

Query: 1739 YYVSKPG--EAAAEANGGDTQAAAVVGPDG---------VGIVXXXXXXXXXXXXGKLVD 1885
            YY+SKPG    A  ANG    A+A V             VG+             GKLVD
Sbjct: 521  YYISKPGGTNGATVANGDANGASATVVVSNVTGEKVITEVGLAATAAALEAAADAGKLVD 580

Query: 1886 TSAPVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGR 2065
            TSAPVDQGTESN+LH+FE+PISL ALQ+FGGP G QAGFMARKQRIEAT+GC+VPENDGR
Sbjct: 581  TSAPVDQGTESNLLHNFELPISLAALQRFGGPQGAQAGFMARKQRIEATIGCKVPENDGR 640

Query: 2066 RHALTLSVSDYKRRRGLL 2119
            RHALTL+VSDYKRRRGLL
Sbjct: 641  RHALTLTVSDYKRRRGLL 658


>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: protein RTF1 homolog [Prunus mume]
          Length = 648

 Score =  615 bits (1585), Expect = 0.0
 Identities = 331/554 (59%), Positives = 393/554 (70%), Gaps = 30/554 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQ--KDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL RE+IL+DR+ K++DK LK   + +  K K+  SRK+T PP  
Sbjct: 99   LYKDEDDRRKLAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKTTHSRKET-PPLP 157

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRRGGFTIDT 901
            ++R +RSSARSADRA    D             QQDPE+  K RD    +     F+  T
Sbjct: 158  SSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGSRSFSHMT 214

Query: 902  XXXXXXXXXXXXXXXXNVKIS------------------EESTNLTYEDVKGITIRRSKL 1027
                            +   S                  E S  LT++D+K ITIRRSKL
Sbjct: 215  RKSFTAVGRSSSSQSDSDSRSHSEDEGSTGEDAMMDSDDERSEGLTFDDIKEITIRRSKL 274

Query: 1028 AKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYLN 1207
            AKW MEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA+DPDR+YKLEN+ THKYLN
Sbjct: 275  AKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLN 334

Query: 1208 VVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSF 1387
            VVWGNE+SAARWQMAMISDS P++EEF Q +REVER GGR+PSKQ+VLEK+EAI+K N+F
Sbjct: 335  VVWGNENSAARWQMAMISDSAPVEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTF 394

Query: 1388 VYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXXS 1567
            VYSA TVKQM++EKKS   RP+N+A EKDRLRR+LEVAQ KH+D                
Sbjct: 395  VYSAATVKQMIEEKKSASSRPLNIALEKDRLRRELEVAQSKHDDAEVDRIKTRLQQLEAR 454

Query: 1568 RQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYYV 1747
            RQ Q KD+KA++LAEMNRKNRVENFKNASE+KP+  GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 455  RQSQGKDSKAVRLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYV 514

Query: 1748 SKPG------EAAAEANGG----DTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSAP 1897
            SKPG      EA  +A+G     ++   AVVG    G+             GKL+DTSAP
Sbjct: 515  SKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAP 574

Query: 1898 VDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHAL 2077
            VD GTESN++H+FE+PISL  LQKFGGP G Q GF+ARKQRIEATVGC+VPENDGRRHAL
Sbjct: 575  VDFGTESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHAL 634

Query: 2078 TLSVSDYKRRRGLL 2119
            TL+VSDYKRRRGLL
Sbjct: 635  TLTVSDYKRRRGLL 648


>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
 gb|EOY28314.1| PAF1 complex component isoform 1 [Theobroma cacao]
          Length = 660

 Score =  615 bits (1586), Expect = 0.0
 Identities = 335/561 (59%), Positives = 398/561 (70%), Gaps = 37/561 (6%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNI--KKQKDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+M+EL+RE+IL++R++KR DK     I  K++ D+ ++SRK+T PP  
Sbjct: 108  LYKNEDDRRKLAQMTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKET-PPLP 166

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK--------R 877
            ++R +RSSARSADRA    D             QQDPE+  K RD    +         +
Sbjct: 167  SSRGVRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGSRGLSPVK 224

Query: 878  RGGFTIDTXXXXXXXXXXXXXXXXN--------VKISEESTNL------TYEDVKGITIR 1015
            R  FT  +                +        +  S++   +      T++D+K ITIR
Sbjct: 225  RKPFTASSLSSSSQSDSESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIR 284

Query: 1016 RSKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTH 1195
            RSKLAKWFMEPFFE+LIVGC+VRVGIG+SK+GPIYRLC+VRNVDA +P+R YKLEN+ T+
Sbjct: 285  RSKLAKWFMEPFFEELIVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTY 344

Query: 1196 KYLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEK 1375
            KYLNVVWGNESSAARWQMAMISDSPP +EEF QLIRE+ER GGRMPSKQ+VLEK+EA++K
Sbjct: 345  KYLNVVWGNESSAARWQMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQK 404

Query: 1376 TNSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXX 1555
              +FVYSA TVKQMLQEKKST  RP+N+AAEKDRLRRDLE+AQ KH++            
Sbjct: 405  AKTFVYSAATVKQMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQ 464

Query: 1556 XXXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSR 1735
               SRQ Q+KDAKA++LAEMNRKNR ENFKNASE+KP+  GLKAGEAGYDPFSRRWTRSR
Sbjct: 465  LEASRQAQEKDAKAVRLAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSR 524

Query: 1736 NYYVSKPGEAAAEA-------------NGGDTQAAAVVGPDGVGIVXXXXXXXXXXXXGK 1876
            NYYV+KP  A A A             NG D +AAA  G                   GK
Sbjct: 525  NYYVAKPPGADAAAVANGDRIGVIASGNGNDARAAAEAGR-----AATVAALQEAAGAGK 579

Query: 1877 LVDTSAPVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPEN 2056
            LVDTSAPVD+GTESN+LHDFEIPISL ALQ+FGGP G  AGFMARKQRIEATVGCQVPEN
Sbjct: 580  LVDTSAPVDEGTESNMLHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPEN 639

Query: 2057 DGRRHALTLSVSDYKRRRGLL 2119
            DGRRHALTL+VSDYKRRRGLL
Sbjct: 640  DGRRHALTLTVSDYKRRRGLL 660


>ref|XP_009378467.1| PREDICTED: protein RTF1 homolog [Pyrus x bretschneideri]
          Length = 657

 Score =  613 bits (1582), Expect = 0.0
 Identities = 337/555 (60%), Positives = 393/555 (70%), Gaps = 31/555 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQKDKSN--QSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL RE+IL++R+ K++DK LK   + + DK    QSRK+T PP  
Sbjct: 107  LYKDEDDRRKLAEMSELQRELILSERAQKKDDKSLKEKFRPKWDKGKAPQSRKET-PPLP 165

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQD------------- 862
            ++R +RSSARSADRA    D             QQDPE+  K RD               
Sbjct: 166  SSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGGSSSSRSFSHL 222

Query: 863  -----SAAKRRGGFTIDTXXXXXXXXXXXXXXXXNVKISEE-STNLTYEDVKGITIRRSK 1024
                 +A  R      D+                 +   +E S  LT++D+K ITIRRSK
Sbjct: 223  NRKSFTAVGRSSSSQSDSDSRSRSEDDGSSGDDAMIDSDDERSEGLTFDDIKEITIRRSK 282

Query: 1025 LAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYL 1204
            LAKWFMEPFFE+LIVGCFVRVGIG+SK+G IYRLC+VRNVDA+DPDRQYKLEN+ THKYL
Sbjct: 283  LAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVRNVDASDPDRQYKLENKTTHKYL 342

Query: 1205 NVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNS 1384
            NVVWGNE+SAARWQMAMISDS P++EEF Q IREVER GGR+PSK++VLEK+EAI+KTNS
Sbjct: 343  NVVWGNENSAARWQMAMISDSAPLEEEFKQWIREVERSGGRLPSKEDVLEKKEAIKKTNS 402

Query: 1385 FVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXX 1564
            FVYSA TVKQM+QEKKS   RP+N+A EKDRLRR+LEVA+ K +D               
Sbjct: 403  FVYSAATVKQMIQEKKSASSRPLNIALEKDRLRRELEVAKSKQDDAEVERIQTRLQQLEA 462

Query: 1565 SRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYY 1744
             RQ Q KD+KAI+LAEMNRKNRVENFKNASE+KP   GLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 463  RRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYDPFSRRWTRSRNYY 522

Query: 1745 VSKPG------EAAAEANGG----DTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSA 1894
            VSKPG      EA A A+G     ++   AVVG    G+             GKL+DTSA
Sbjct: 523  VSKPGEQKEEAEAIAVADGALVDIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSA 582

Query: 1895 PVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHA 2074
            P+D GTESN+ HDFE+PISL ALQKFGGP G Q GF+ARKQRIEATVGCQVPENDGRRHA
Sbjct: 583  PLDFGTESNLKHDFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDGRRHA 642

Query: 2075 LTLSVSDYKRRRGLL 2119
            LTL+VSDYKRRRGLL
Sbjct: 643  LTLTVSDYKRRRGLL 657


>ref|XP_007025691.2| PREDICTED: protein RTF1 homolog [Theobroma cacao]
 ref|XP_007025692.2| PREDICTED: protein RTF1 homolog [Theobroma cacao]
          Length = 660

 Score =  613 bits (1582), Expect = 0.0
 Identities = 334/561 (59%), Positives = 398/561 (70%), Gaps = 37/561 (6%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNI--KKQKDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+M+EL+RE+IL++R++KR DK     I  K++ D+ ++SRK+T PP  
Sbjct: 108  LYKNEDDRRKLAQMTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKET-PPLP 166

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK--------R 877
            ++R +RSSARSADRA    D             QQDPE+  K RD    +         +
Sbjct: 167  SSRGVRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGSRGLSPVK 224

Query: 878  RGGFTIDTXXXXXXXXXXXXXXXXN--------VKISEESTNL------TYEDVKGITIR 1015
            R  FT  +                +        +  S++   +      T++D+K ITIR
Sbjct: 225  RKPFTASSLSSSSQSDSESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIR 284

Query: 1016 RSKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTH 1195
            RSKLAKWFMEPFFE+LIVGC+VRVGIG+SK+GPIYRLC+VRNVDA +P+R YKLEN+ T+
Sbjct: 285  RSKLAKWFMEPFFEELIVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTY 344

Query: 1196 KYLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEK 1375
            KYLNVVWGNESSAARWQMAMISDSPP +EEF QLIRE+ER GGRMPSKQ+VLEK+EA++K
Sbjct: 345  KYLNVVWGNESSAARWQMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQK 404

Query: 1376 TNSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXX 1555
              +FVYSA TVKQMLQEKKST  RP+N+AAEKDRLRRDLE+AQ KH++            
Sbjct: 405  AKTFVYSAATVKQMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQ 464

Query: 1556 XXXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSR 1735
               SRQ Q+KDAKA++LAEMNRKNR ENFKNASE+KP+  GLKAGEAGYDPFSRRWTRSR
Sbjct: 465  LEASRQAQEKDAKAVRLAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSR 524

Query: 1736 NYYVSKPGEAAAEA-------------NGGDTQAAAVVGPDGVGIVXXXXXXXXXXXXGK 1876
            NYYV+KP  A A A             NG D +AAA  G                   GK
Sbjct: 525  NYYVAKPPGADAAAVANGDRIGVIASGNGNDARAAAEAGR-----AATVAALQEAAGAGK 579

Query: 1877 LVDTSAPVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPEN 2056
            LVDTSAPVD+GTESN+LHDFEIPISL ALQ+FGGP G  AGFMARKQRIEATVGC+VPEN
Sbjct: 580  LVDTSAPVDEGTESNMLHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCRVPEN 639

Query: 2057 DGRRHALTLSVSDYKRRRGLL 2119
            DGRRHALTL+VSDYKRRRGLL
Sbjct: 640  DGRRHALTLTVSDYKRRRGLL 660


>ref|XP_012091565.1| protein RTF1 homolog [Jatropha curcas]
 gb|KDP20938.1| hypothetical protein JCGZ_21409 [Jatropha curcas]
          Length = 658

 Score =  613 bits (1581), Expect = 0.0
 Identities = 331/556 (59%), Positives = 398/556 (71%), Gaps = 32/556 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQKD--KSNQSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL+REMIL++R++K+ DK+L   I+ ++D  ++ +SRK+T PP  
Sbjct: 108  LYKDEDDRRKLAQMSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKET-PPLP 166

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK--------R 877
            ++R +R+SARSADRA    D             QQDPE+  K RD              R
Sbjct: 167  SSRGVRTSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDVSRGTSGSRGVSPVR 224

Query: 878  RGGFTIDTXXXXXXXXXXXXXXXXNVKISEE------------STNLTYEDVKGITIRRS 1021
            R  FT  +                     +             S  LTY+D++ +TIRRS
Sbjct: 225  RKRFTSASLSSSSSESDSRSHSEDEASTGDGGMADSDEDREPGSEGLTYDDIREVTIRRS 284

Query: 1022 KLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKY 1201
            KLAKW MEP+FE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDAADPDR YKLEN+ T+KY
Sbjct: 285  KLAKWLMEPWFEELIVGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKY 344

Query: 1202 LNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTN 1381
            LNV+WGNESSAARWQMAM+SDS P ++E+ Q +REVER GGRMP+KQ++LEK+EAI+K+N
Sbjct: 345  LNVIWGNESSAARWQMAMVSDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIKKSN 404

Query: 1382 SFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXX 1561
            +FVYSA TVKQMLQEKKS   RP+NVAAEKDRLRR+LEVAQMK +D              
Sbjct: 405  TFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEVAQMKQDDAEVERIRARIQELE 464

Query: 1562 XSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNY 1741
             SRQ Q+KDAKAI+LAEMNRKNR ENF+NASE+KP+   LKAGEAGYDPFSRRWTRSRNY
Sbjct: 465  ASRQAQEKDAKAIRLAEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNY 524

Query: 1742 YVSKPG--EAAAEANGGDTQAAAVVGPDG--------VGIVXXXXXXXXXXXXGKLVDTS 1891
            YVSKPG  + AAEAN   T  AAV   +G         G+             GKLVDT+
Sbjct: 525  YVSKPGGADVAAEANNNGT--AAVAHSNGAATGTLAEAGMAATAAALEAAADAGKLVDTA 582

Query: 1892 APVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRH 2071
            APVDQGTESN LHDF++PISLTAL+KFGG  G +AGFMARKQ+IEATVGC+VPENDGRRH
Sbjct: 583  APVDQGTESNTLHDFDLPISLTALEKFGGAKGAKAGFMARKQQIEATVGCRVPENDGRRH 642

Query: 2072 ALTLSVSDYKRRRGLL 2119
            ALTL+VSDYKRRRGLL
Sbjct: 643  ALTLTVSDYKRRRGLL 658


>ref|XP_009347098.1| PREDICTED: protein RTF1 homolog [Pyrus x bretschneideri]
          Length = 657

 Score =  613 bits (1580), Expect = 0.0
 Identities = 337/555 (60%), Positives = 393/555 (70%), Gaps = 31/555 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQKDKSN--QSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL RE+IL++R+ K++DK LK   + + DK    QSRK+T PP  
Sbjct: 107  LYKDEDDRRKLAEMSELQRELILSERAQKKDDKSLKEKFRPKWDKGKAPQSRKET-PPLP 165

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQD------------- 862
            ++R +RSSARSADRA    D             QQDPE+  K RD               
Sbjct: 166  SSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGGSSSSRSFSHL 222

Query: 863  -----SAAKRRGGFTIDTXXXXXXXXXXXXXXXXNVKISEE-STNLTYEDVKGITIRRSK 1024
                 +A  R      D+                 +   +E S  LT++D+K ITIRRSK
Sbjct: 223  NRKSFTAVGRSSSSQSDSDSRSRSEDDGSSGDDAMIDSDDERSEGLTFDDIKEITIRRSK 282

Query: 1025 LAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYL 1204
            LAKWFMEPFFE+LIVGCFVRVGIG+SK+G IYRLC+VRNVDA+DPDRQYKLEN+ THKYL
Sbjct: 283  LAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVRNVDASDPDRQYKLENKTTHKYL 342

Query: 1205 NVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNS 1384
            NVVWGNE+SAARWQMAMISDS P++EEF Q IREVER GGR+PSK++VLEK+EAI+KTNS
Sbjct: 343  NVVWGNENSAARWQMAMISDSAPLEEEFKQWIREVERSGGRLPSKEDVLEKKEAIKKTNS 402

Query: 1385 FVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXX 1564
            FVYSA TVKQM+QEKKS   RP+N+A EKDRLRR+LEVA+ K +D               
Sbjct: 403  FVYSAATVKQMIQEKKSASSRPLNIALEKDRLRRELEVAKSKQDDAEVERIQTRLQQLEA 462

Query: 1565 SRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYY 1744
             RQ Q KD+KAI+LAEMNRKNRVENFKNASE+KP   GLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 463  RRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYDPFSRRWTRSRNYY 522

Query: 1745 VSKPG------EAAAEANGG----DTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSA 1894
            VSKPG      EA A A+G     ++   AVVG    G+             GKL+DTSA
Sbjct: 523  VSKPGEQKEEAEAIAVADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSA 582

Query: 1895 PVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHA 2074
            PVD GTESN+ H+FE+PISL ALQKFGGP G Q GF+ARKQRIEATVGCQVPENDGRRHA
Sbjct: 583  PVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDGRRHA 642

Query: 2075 LTLSVSDYKRRRGLL 2119
            LTL+VSDYKRRRGLL
Sbjct: 643  LTLTVSDYKRRRGLL 657


>ref|XP_008382360.1| PREDICTED: protein RTF1 homolog [Malus domestica]
          Length = 657

 Score =  613 bits (1580), Expect = 0.0
 Identities = 337/555 (60%), Positives = 393/555 (70%), Gaps = 31/555 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQKDKSN--QSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL RE+IL++R+ K++DK LK   + + DK    QSRK+T PP  
Sbjct: 107  LYKDEDDRRKLAEMSELQRELILSERAQKKDDKSLKEKFRPKWDKGKAPQSRKET-PPLP 165

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQD------------- 862
            ++R +RSSARSADRA    D             QQDPE+  K RD               
Sbjct: 166  SSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGGSSSSRSFSHL 222

Query: 863  -----SAAKRRGGFTIDTXXXXXXXXXXXXXXXXNVKISEE-STNLTYEDVKGITIRRSK 1024
                 +A  R      D+                 +   +E S  LT++D+K ITIRRSK
Sbjct: 223  NRKSFTAVGRSSSSQSDSDSRSRSEDDGSSGDDAMIDSDDERSEGLTFDDIKEITIRRSK 282

Query: 1025 LAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYL 1204
            LAKWFMEPFFE+LIVGCFVRVGIG+SK+G IYRLC+VRNVDA+DPDRQYKLEN+ THKYL
Sbjct: 283  LAKWFMEPFFEELIVGCFVRVGIGRSKSGAIYRLCMVRNVDASDPDRQYKLENKTTHKYL 342

Query: 1205 NVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNS 1384
            NVVWGNE+SAARWQMAMISDS P++EEF Q IREVER GGR+PSK++VLEK+EAI+KTNS
Sbjct: 343  NVVWGNENSAARWQMAMISDSAPLEEEFKQWIREVERSGGRLPSKEDVLEKKEAIKKTNS 402

Query: 1385 FVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXX 1564
            FVYSA TVKQM+QEKKS   RP+N+A EKDRLRR+LEVA+ K +D               
Sbjct: 403  FVYSAATVKQMIQEKKSASSRPLNIALEKDRLRRELEVAKSKQDDAEVERIETRLQQLEA 462

Query: 1565 SRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYY 1744
             RQ Q KD+KAI+LAEMNRKNRVENFKNASE+KP   GLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 463  RRQSQGKDSKAIRLAEMNRKNRVENFKNASELKPKNIGLKAGEAGYDPFSRRWTRSRNYY 522

Query: 1745 VSKPG------EAAAEANGG----DTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSA 1894
            VSKPG      EA A A+G     ++   AVVG    G+             GKL+DTSA
Sbjct: 523  VSKPGEQKEEAEAIAVADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSA 582

Query: 1895 PVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHA 2074
            PVD GTESN+ H+FE+PISL ALQKFGGP G Q GF+ARKQRIEATVGCQVPENDGRRHA
Sbjct: 583  PVDFGTESNLKHNFELPISLAALQKFGGPQGAQKGFLARKQRIEATVGCQVPENDGRRHA 642

Query: 2075 LTLSVSDYKRRRGLL 2119
            LTL+VSDYKRRRGLL
Sbjct: 643  LTLTVSDYKRRRGLL 657


>gb|PON96093.1| RNA polymerase-associated protein Rtf [Trema orientalis]
          Length = 658

 Score =  612 bits (1579), Expect = 0.0
 Identities = 339/557 (60%), Positives = 396/557 (71%), Gaps = 33/557 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQ---KDKSNQSRKDTSPPH 718
            LYK E+DRR+LA+M+EL REMIL DR++K+ DK+LK  ++ +   K KS QSRK T PP 
Sbjct: 106  LYKDEDDRRKLAEMTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKSQQSRKST-PPL 164

Query: 719  TANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK-------- 874
             ++R +RSSARSADRA    D             QQDPE+  K RD    +         
Sbjct: 165  QSSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGNRNFLNN 221

Query: 875  RRGGFTI---------DTXXXXXXXXXXXXXXXXNVKISEE---STNLTYEDVKGITIRR 1018
            +R  FT          D+                 +   +E   S   T+ED+K ITIRR
Sbjct: 222  KRKSFTATSVSSSSRSDSESQSRSEDEGSTGDGGMIDSDDERPGSDGPTFEDIKEITIRR 281

Query: 1019 SKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHK 1198
            SKLAKWFMEPFFE+LIVGCFVRVGIG+SK+G IYRLC+VRNVDA DPDRQYKLEN+ THK
Sbjct: 282  SKLAKWFMEPFFEELIVGCFVRVGIGRSKSGSIYRLCMVRNVDATDPDRQYKLENKNTHK 341

Query: 1199 YLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKT 1378
            YLNVVWGNE+SAARWQMAM+SDS PI+EEF Q +REVER+GGRMP+KQ++LEK+EAI+K 
Sbjct: 342  YLNVVWGNENSAARWQMAMVSDSAPIEEEFKQWVREVERNGGRMPTKQDLLEKKEAIKKI 401

Query: 1379 NSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXX 1558
            N+FVYSA TVKQMLQEKKS   RP+NVA EKDRLRR+LEVAQ K+++             
Sbjct: 402  NNFVYSAATVKQMLQEKKSASSRPLNVALEKDRLRRELEVAQSKNDEAEVERIKRRLVEL 461

Query: 1559 XXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRN 1738
              SR+ +  D KAI+LAEMNRKNRVENFKNASE+KP+   LKAGEAGYDPFSRRWTRSRN
Sbjct: 462  EASRKAKVSDVKAIRLAEMNRKNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRN 521

Query: 1739 YYVSKPGEAAAE--ANGGDTQAAAVVGPDG--------VGIVXXXXXXXXXXXXGKLVDT 1888
            YYVSKPGEA  +  A  G+  A+A V  +G        VG+             GKLVDT
Sbjct: 522  YYVSKPGEAKGDVGATPGNNGASAEVESNGRGGVVAADVGMAATAAALEAAADAGKLVDT 581

Query: 1889 SAPVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRR 2068
            SAPVDQGT SNVLH+FE+PISL  LQKFGGP G QAGFMARKQRIEATVGC+VPENDGRR
Sbjct: 582  SAPVDQGTVSNVLHNFELPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRR 641

Query: 2069 HALTLSVSDYKRRRGLL 2119
            HALTL+VSDYKRRRGLL
Sbjct: 642  HALTLTVSDYKRRRGLL 658


>ref|XP_020415112.1| protein RTF1 homolog [Prunus persica]
 gb|ONI15573.1| hypothetical protein PRUPE_3G050300 [Prunus persica]
          Length = 656

 Score =  612 bits (1578), Expect = 0.0
 Identities = 330/554 (59%), Positives = 392/554 (70%), Gaps = 30/554 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQ--KDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL RE+IL+DR+ K++DK LK   + +  K K+  SRK+T PP  
Sbjct: 107  LYKDEDDRRKLAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKTTHSRKET-PPLP 165

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRRGGFTIDT 901
            ++R +RSSARSADRA    D             QQDPE+  K RD    +     F+  T
Sbjct: 166  SSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGSRSFSHMT 222

Query: 902  XXXXXXXXXXXXXXXXNVKIS------------------EESTNLTYEDVKGITIRRSKL 1027
                            +   S                  E S  LT++D+K ITIRRSKL
Sbjct: 223  RKSFTAVGRSSSSQSDSDSRSHSEDDGSTGEDPMMDSDDERSEGLTFDDIKEITIRRSKL 282

Query: 1028 AKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTHKYLN 1207
            AKW MEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA+DPDR+YKLEN+ THKYLN
Sbjct: 283  AKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLN 342

Query: 1208 VVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEKTNSF 1387
            VVWGNE+SAARWQMAMISDS P++EEF Q +REVER GGR+PSKQ+VLEK+EAI+K N+F
Sbjct: 343  VVWGNENSAARWQMAMISDSAPLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTF 402

Query: 1388 VYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXXXXXS 1567
            VYSA TVKQM++EKKS   RP+N+A EKDRLRR+LEVAQ KH+D                
Sbjct: 403  VYSAATVKQMIEEKKSASSRPLNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEAR 462

Query: 1568 RQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSRNYYV 1747
            RQ Q KD+KA++LAEMNRKNRVENFKNASE+KP+  GLKAGEAGYDPFSRRWTRSRNYYV
Sbjct: 463  RQSQGKDSKAVRLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYV 522

Query: 1748 SKPG------EAAAEANGG----DTQAAAVVGPDGVGIVXXXXXXXXXXXXGKLVDTSAP 1897
            SKPG      EA  +A+G     ++   AVVG    G+             GKL+DTSAP
Sbjct: 523  SKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAP 582

Query: 1898 VDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRRHAL 2077
            VD GTESN++H+FE+PISL  LQKFGGP G Q GF+ARKQRIEATVGC+VPENDGRRHAL
Sbjct: 583  VDFGTESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHAL 642

Query: 2078 TLSVSDYKRRRGLL 2119
            TL+VSDYKRR GLL
Sbjct: 643  TLTVSDYKRRMGLL 656


>ref|XP_022715913.1| protein RTF1 homolog [Durio zibethinus]
 ref|XP_022715914.1| protein RTF1 homolog [Durio zibethinus]
 ref|XP_022715915.1| protein RTF1 homolog [Durio zibethinus]
          Length = 660

 Score =  611 bits (1575), Expect = 0.0
 Identities = 331/557 (59%), Positives = 394/557 (70%), Gaps = 33/557 (5%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNI--KKQKDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+++EL+RE+IL++R++KR DK     I  K+  D+ ++SRK T PP  
Sbjct: 108  LYKNEDDRRQLAQLTELERELILSERADKRGDKKFTEKIRSKRDNDRPSRSRKGT-PPLP 166

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAK--------R 877
            ++R +RSSARSADRA    D             QQDPE+  K +D    +         +
Sbjct: 167  SSRGVRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLKDASRVSSGSRGLSPVK 224

Query: 878  RGGFTIDTXXXXXXXXXXXXXXXXNVKISEESTNL--------------TYEDVKGITIR 1015
            R  FT  +                +   + +   +              T++D+K ITIR
Sbjct: 225  RKPFTTSSLSSSSQSESESRSNSEDEGSTGDGGMVDSDDERGGRGPDGPTFDDIKEITIR 284

Query: 1016 RSKLAKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDRQYKLENRMTH 1195
            RSKLAKWFMEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA DPDR YKLEN+ T+
Sbjct: 285  RSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDATDPDRTYKLENKTTY 344

Query: 1196 KYLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKREAIEK 1375
            KYLNVVWGNESSAARWQMAM+SDSPP++EEF QLIREV++ GGRMPSKQ+VLEK+EA++K
Sbjct: 345  KYLNVVWGNESSAARWQMAMVSDSPPLEEEFRQLIREVDKSGGRMPSKQDVLEKKEALQK 404

Query: 1376 TNSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXXXXXXX 1555
              ++VYSA TVKQMLQEKKST  RP+N+AAEKDRLRRDLE+AQ KH++            
Sbjct: 405  AKTYVYSAATVKQMLQEKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKTRLKQ 464

Query: 1556 XXXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRRWTRSR 1735
               SRQ Q+KD KA++LAEMNRKNRVENFKNAS +KP+   LKAGEAGYDPFSRRWTRSR
Sbjct: 465  LDASRQAQEKDVKAVRLAEMNRKNRVENFKNASGLKPVNTALKAGEAGYDPFSRRWTRSR 524

Query: 1736 NYYVSKP--GEAAAEANGGDTQAAAVVGPDG-------VGIVXXXXXXXXXXXXGKLVDT 1888
            NYYV+KP  G+AAA  N GDT  A   G           G              GKLVDT
Sbjct: 525  NYYVAKPPGGDAAAVGN-GDTNGATASGNGNDARAAAEAGRAATAAALQEAAGAGKLVDT 583

Query: 1889 SAPVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVPENDGRR 2068
            SAPVD+GTESN+LHDFEIPISL ALQKFGGP G  AGFMARKQRIEATVGC+VPENDGRR
Sbjct: 584  SAPVDEGTESNMLHDFEIPISLNALQKFGGPQGAVAGFMARKQRIEATVGCRVPENDGRR 643

Query: 2069 HALTLSVSDYKRRRGLL 2119
            HALTL+VSDYKRRRGLL
Sbjct: 644  HALTLTVSDYKRRRGLL 660


>ref|XP_021827153.1| LOW QUALITY PROTEIN: protein RTF1 homolog [Prunus avium]
          Length = 665

 Score =  610 bits (1573), Expect = 0.0
 Identities = 333/563 (59%), Positives = 394/563 (69%), Gaps = 39/563 (6%)
 Frame = +2

Query: 548  LYKGEEDRRRLAKMSELDREMILADRSNKRNDKDLKNNIKKQ--KDKSNQSRKDTSPPHT 721
            LYK E+DRR+LA+MSEL RE+IL+DR+ K++DK LK   + +  K K+  SRK+T PP  
Sbjct: 107  LYKDEDDRRKLAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKTTHSRKET-PPLP 165

Query: 722  ANRTMRSSARSADRAKLAKDXXXXXXXXXXXXXQQDPESSWKRRDQDSAAKRRGGFTIDT 901
            ++R +RSSARSADRA    D             QQDPE+  K RD    +     F+  T
Sbjct: 166  SSR-VRSSARSADRAAAKDDALNELRAKRLK--QQDPEAHRKLRDASRGSSGSRSFSHMT 222

Query: 902  XXXXXXXXXXXXXXXXNVKIS------------------EESTNLTYEDVKGITIRRSKL 1027
                            +   S                  E S  LT++D+K ITIRRSKL
Sbjct: 223  RKSFTAVGRSSSSQSDSDSQSHSEDEGSTGEDPMMDSDDERSEGLTFDDIKEITIRRSKL 282

Query: 1028 AKWFMEPFFEDLIVGCFVRVGIGKSKTGPIYRLCIVRNVDAADPDR---------QYKLE 1180
            AKW MEPFFE+LIVGCFVRVGIG+SK+GPIYRLC+VRNVDA+DPDR         +YKLE
Sbjct: 283  AKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRLCMVRNVDASDPDRXXXXXXPDRKYKLE 342

Query: 1181 NRMTHKYLNVVWGNESSAARWQMAMISDSPPIKEEFDQLIREVERHGGRMPSKQEVLEKR 1360
            N+ THKYLNVVWGNE+SAARWQMAMISDS P++EEF Q +REVER GGR+PSKQ+VLEK+
Sbjct: 343  NKTTHKYLNVVWGNENSAARWQMAMISDSAPLEEEFKQWVREVERSGGRLPSKQDVLEKK 402

Query: 1361 EAIEKTNSFVYSAETVKQMLQEKKSTIRRPMNVAAEKDRLRRDLEVAQMKHNDXXXXXXX 1540
            EAI+K N+FVYSA TVKQM++EKKS   RP+N+A EKDRLRR+LEVAQ KH+D       
Sbjct: 403  EAIKKINTFVYSAATVKQMIEEKKSASSRPLNIALEKDRLRRELEVAQSKHDDAEVERIK 462

Query: 1541 XXXXXXXXSRQPQQKDAKAIKLAEMNRKNRVENFKNASEVKPLAAGLKAGEAGYDPFSRR 1720
                     RQ Q KD+KA++LAEMNRKNRVENFKNASE+KP+  GLKAGEAGYDPFSRR
Sbjct: 463  TRLQQLEARRQSQGKDSKAVRLAEMNRKNRVENFKNASELKPVKTGLKAGEAGYDPFSRR 522

Query: 1721 WTRSRNYYVSKPG------EAAAEANGG----DTQAAAVVGPDGVGIVXXXXXXXXXXXX 1870
            WTRSRNYYVSKPG      EA  +A+G     ++   AVVG    G+             
Sbjct: 523  WTRSRNYYVSKPGEQKGEAEAIVDADGALADIESNGTAVVGAVRAGMAATAAALEAAAGA 582

Query: 1871 GKLVDTSAPVDQGTESNVLHDFEIPISLTALQKFGGPHGVQAGFMARKQRIEATVGCQVP 2050
            GKL+DTSAPVD GTESN++H+FE+PISLT LQKFGGP G Q GF+ARKQRIEATVGCQVP
Sbjct: 583  GKLIDTSAPVDFGTESNLMHNFELPISLTTLQKFGGPQGAQEGFLARKQRIEATVGCQVP 642

Query: 2051 ENDGRRHALTLSVSDYKRRRGLL 2119
            ENDGRRHALTL+VSDYKRRRGLL
Sbjct: 643  ENDGRRHALTLTVSDYKRRRGLL 665