BLASTX nr result

ID: Chrysanthemum21_contig00008827 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00008827
         (1307 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_014039485.1| PREDICTED: histidine-rich glycoprotein-like,...    63   5e-07
ref|XP_008219414.1| PREDICTED: extensin-like [Prunus mume]             59   9e-06

>ref|XP_014039485.1| PREDICTED: histidine-rich glycoprotein-like, partial [Salmo salar]
          Length = 429

 Score = 63.2 bits (152), Expect = 5e-07
 Identities = 47/178 (26%), Positives = 60/178 (33%), Gaps = 17/178 (9%)
 Frame = +3

Query: 369 IRTTNPKHDLTCIQQTRTSIL*RETSPRAHNHHDLXXXXXXXXXXLQPQRPHHHHDLTTP 548
           I T +P H  T    T  S     T+P  H+HH +          +    PHHHH +T P
Sbjct: 63  ITTPSPHHHHTI---TTPSQHHHHTTPSPHHHHTITAPSPHHHRTITAPSPHHHHTITAP 119

Query: 549 RPH--------NQHH--DLXXXXXXXXSPSXXXXXXXXXXXXXXXXXXRPHHHHYL---- 686
            PH        +QHH   +        +PS                     HHH+     
Sbjct: 120 SPHHHHTITTPSQHHHNTITTPQHHHTTPSQHHHSTITAPSPHHHSTTPSQHHHHTITAP 179

Query: 687 ---KTITTTSKPSPLPHNHHDLTITTTSQPPRPHHYHNLXXXXXXXXXXXRPHQQHNL 851
               TITT       P  HH  TITT      P H+H +            P Q HN+
Sbjct: 180 HHHNTITTPQHHHTTPSQHHHSTITT------PQHHHTITTAPHHHNTITTPSQHHNI 231



 Score = 62.8 bits (151), Expect = 6e-07
 Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 9/146 (6%)
 Frame = +3

Query: 441 TSPRAHNHHDLXXXXXXXXXXLQPQRPHHHHDLTTPRPHNQHHDLXXXXXXXXSPSXXXX 620
           T+P  H+HH +          +     HHHH +T P PH  HH          +PS    
Sbjct: 20  TTPSQHHHHTITTPSPHHHSTITTPSQHHHHTITAPSPH--HHS------TITTPS---- 67

Query: 621 XXXXXXXXXXXXXXRPHHHHYLKTITTTSK----PSPLPHNHHDLTITT-----TSQPPR 773
                          PHHHH   TITT S+     +P PH+HH +T  +     T   P 
Sbjct: 68  ---------------PHHHH---TITTPSQHHHHTTPSPHHHHTITAPSPHHHRTITAPS 109

Query: 774 PHHYHNLXXXXXXXXXXXRPHQQHNL 851
           PHH+H +            PH  H +
Sbjct: 110 PHHHHTI--------TAPSPHHHHTI 127


>ref|XP_008219414.1| PREDICTED: extensin-like [Prunus mume]
          Length = 476

 Score = 59.3 bits (142), Expect = 9e-06
 Identities = 33/94 (35%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
 Frame = +3

Query: 510 PQRPHHHHDLT---TPRPHNQHHDLXXXXXXXXSPSXXXXXXXXXXXXXXXXXXRPHHHH 680
           P  PHHHHD     TP P + HHD         SP                    PHHH 
Sbjct: 64  PPPPHHHHDYPKPPTPSPPHHHHDYPKPPLPSPSPPPPPPHHHDYPKPPTASPPPPHHHD 123

Query: 681 YLKTITTTSKPSPLPHNHHDLTITTTSQPPRPHH 782
           Y K       PSP P +HHD        PP PHH
Sbjct: 124 YPKP----PPPSPTPPHHHDYPKPPPPCPPPPHH 153


Top