BLASTX nr result

ID: Chrysanthemum21_contig00007806 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00007806
         (545 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022028877.1| mediator of RNA polymerase II transcription ...    61   1e-07
ref|XP_022001707.1| mediator of RNA polymerase II transcription ...    59   1e-06
gb|KVH91385.1| Coactivator CBP, KIX domain-containing protein [C...    58   1e-06

>ref|XP_022028877.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 ref|XP_022028878.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 ref|XP_022028879.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 ref|XP_022028880.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 gb|OTG31872.1| putative coactivator CBP, KIX domain-containing protein [Helianthus
           annuus]
          Length = 1290

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = +1

Query: 1   YHQQLKSGALFSPQLLSAASPQMSQRASPKIDQ*IMF 111
           YHQQLK GA FSPQLLSAASPQMSQ ASP+IDQ  MF
Sbjct: 880 YHQQLKPGAPFSPQLLSAASPQMSQHASPQIDQSNMF 916


>ref|XP_022001707.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 ref|XP_022001708.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 ref|XP_022001709.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 ref|XP_022001710.1| mediator of RNA polymerase II transcription subunit 15a-like
           [Helianthus annuus]
 gb|OTG02165.1| hypothetical protein HannXRQ_Chr13g0410001 [Helianthus annuus]
          Length = 1237

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   YHQQLKSGALFSPQLLSAASPQMSQRASPKIDQ 99
           YHQQLK GA FSPQLLS+ASPQMSQ ASP+IDQ
Sbjct: 826 YHQQLKPGAPFSPQLLSSASPQMSQHASPQIDQ 858


>gb|KVH91385.1| Coactivator CBP, KIX domain-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 1117

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   YHQQLKSGALFSPQLLSAASPQMSQRASPKIDQ*IMF 111
           YHQQLKSGA FSPQLL AASPQMSQ  SP+IDQ  +F
Sbjct: 695 YHQQLKSGAPFSPQLLPAASPQMSQHPSPQIDQQNLF 731


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