BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00007612
         (495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021969785.1| large ribosomal RNA subunit accumulation pro...    93   2e-19
gb|KVH95767.1| Protein of unknown function DUF177 [Cynara cardun...    93   2e-19
ref|XP_023736460.1| large ribosomal RNA subunit accumulation pro...    83   7e-16

>ref|XP_021969785.1| large ribosomal RNA subunit accumulation protein YCED homolog 1,
           chloroplastic [Helianthus annuus]
 gb|OTG22479.1| Protein of unknown function (DUF177) [Helianthus annuus]
          Length = 315

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 58/119 (48%), Positives = 70/119 (58%), Gaps = 13/119 (10%)
 Frame = -3

Query: 319 MSLMLSSTFTAPCFSVNNVKA--------SLSHPHCNSFNSNAIQKRLF-----TSTIIK 179
           M L+LSS+F  PCF VNNVKA        SLSHP   S + N +QK LF     ++TI+K
Sbjct: 1   MPLILSSSFMTPCFYVNNVKAPRLLIPRTSLSHPCYKSTHCNILQKHLFANKHRSTTILK 60

Query: 178 RKSHMEFVERKSMNSSYGTIGDENVMEXXXXXXXXXXXXXXXDSPWEGAILYQRNSSIT 2
            KS +EF  R+S+NS+Y    DENV E               DSPWEGAILYQRN SI+
Sbjct: 61  HKSRLEFKTRESLNSNYELASDENVTE----DEWMDQDVDELDSPWEGAILYQRNPSIS 115


>gb|KVH95767.1| Protein of unknown function DUF177 [Cynara cardunculus var.
           scolymus]
          Length = 333

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 12/119 (10%)
 Frame = -3

Query: 322 EMSLMLSSTFTAPCFSVNNVKAS--------LSHPHCNSFNSNAIQKRLFT----STIIK 179
           +M L+LSS+F +PCF  NNVK +        LSHPH NS + N +QKRLF     S I+K
Sbjct: 25  KMPLILSSSFVSPCFYENNVKGAHVLVPQITLSHPHHNSISCNILQKRLFANKHASMILK 84

Query: 178 RKSHMEFVERKSMNSSYGTIGDENVMEXXXXXXXXXXXXXXXDSPWEGAILYQRNSSIT 2
            KS +EF+ R S+NS+Y   G+ N+ +                SPWEGAILYQRN SI+
Sbjct: 85  HKSPLEFITRASVNSNYELAGESNMEDDWRDQEDVGADPMD--SPWEGAILYQRNPSIS 141


>ref|XP_023736460.1| large ribosomal RNA subunit accumulation protein YCED homolog 1,
           chloroplastic [Lactuca sativa]
          Length = 326

 Score = 83.2 bits (204), Expect = 7e-16
 Identities = 55/119 (46%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
 Frame = -3

Query: 319 MSLMLSSTFTAPCFSVNNVKA--------SLSHPHCNSFNSNAIQKRLF----TSTIIKR 176
           M L+LSS+F  PC  V+ VK         SLSHPH NS + N +QK LF     S I+K 
Sbjct: 1   MPLILSSSFMPPCSFVDTVKEPHIIFPQPSLSHPHHNSIHCNILQKCLFPNNHVSMILKH 60

Query: 175 KSHMEFVERKS-MNSSYGTIGDENVMEXXXXXXXXXXXXXXXDSPWEGAILYQRNSSIT 2
           K+ M+ + R+S MNSSY    DEN ME                SPWEGAILYQRN SI+
Sbjct: 61  KAPMKLIARESSMNSSYELFSDENSMEDDWIDQGEGDDSMD--SPWEGAILYQRNPSIS 117