BLASTX nr result
ID: Chrysanthemum21_contig00007415
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00007415
(450 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH96264.1| Phox/Bem1p [Cynara cardunculus var. scolymus] 80 1e-21
ref|XP_023759138.1| mediator of RNA polymerase II transcription ... 70 4e-18
ref|XP_022011776.1| RNA polymerase II degradation factor 1-like ... 72 3e-16
ref|XP_022015416.1| uncharacterized protein LOC110915093 [Helian... 50 2e-12
ref|XP_023746332.1| ataxin-2 homolog [Lactuca sativa] >gi|132235... 57 2e-09
gb|KVI05394.1| hypothetical protein Ccrd_016282 [Cynara carduncu... 45 4e-09
ref|XP_022021302.1| uncharacterized protein LOC110921316 [Helian... 56 5e-07
ref|XP_022019280.1| uncharacterized protein LOC110919317 [Helian... 56 3e-06
>gb|KVH96264.1| Phox/Bem1p [Cynara cardunculus var. scolymus]
Length = 682
Score = 80.1 bits (196), Expect(2) = 1e-21
Identities = 55/106 (51%), Positives = 58/106 (54%)
Frame = +1
Query: 1 LASPDSVSSDGSRQKPTMIYQDPLVQIQSSNNVNRTGELXXXXXXXXXXXXRIXXXXXXX 180
LAS DSVSSDG RQKP MIYQD LVQIQSSNN NRT +L +
Sbjct: 377 LASSDSVSSDG-RQKPPMIYQDQLVQIQSSNNNNRTTDLNNPPDQNTRIQMQ------QQ 429
Query: 181 XXXXADSAYLMSMSNTQVDPXXXXXXXXXXXXXXXTAVPQPQYIQH 318
ADSAYLMS+S TQVD TAVP PQYIQH
Sbjct: 430 QQQIADSAYLMSISTTQVD-TQHPQLHHQQPQFIHTAVPPPQYIQH 474
Score = 50.4 bits (119), Expect(2) = 1e-21
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = +2
Query: 323 YQMYXXXXXXXXXXXALDQQNFVYYMPAPVRQAPQGYNMPMQ 448
YQMY A+DQQNFVYYMPA RQAP GYN+ MQ
Sbjct: 486 YQMYPSQNQHHPHHPAIDQQNFVYYMPA--RQAPHGYNLQMQ 525
>ref|XP_023759138.1| mediator of RNA polymerase II transcription subunit 15 [Lactuca
sativa]
gb|PLY89005.1| hypothetical protein LSAT_3X62121 [Lactuca sativa]
Length = 672
Score = 70.5 bits (171), Expect(2) = 4e-18
Identities = 52/111 (46%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Frame = +1
Query: 1 LASPDSVSSDGSRQKPTMIYQDPLVQIQSSNNVNRT--GELXXXXXXXXXXXXRIXXXXX 174
LAS DSVSSDG RQKP M+YQDPLVQIQ+SNN NR+ L +I
Sbjct: 380 LASSDSVSSDG-RQKPPMMYQDPLVQIQTSNN-NRSDPNNLSDQNTRIQMQQQQIP---- 433
Query: 175 XXXXXXADSAYLMSMSNTQVD---PXXXXXXXXXXXXXXXTAVPQPQYIQH 318
+SAY+MSMSN QVD P TAVP PQYI H
Sbjct: 434 -------ESAYIMSMSNNQVDPQHPQLHHQQQQQQPQFIHTAVPPPQYIHH 477
Score = 48.5 bits (114), Expect(2) = 4e-18
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +2
Query: 323 YQMYXXXXXXXXXXXALDQQNFVYYMPAPVRQAPQGYNMPMQ 448
YQMY ALDQQNFVYYMPA RQ P GYN+ +Q
Sbjct: 489 YQMYPSQNQHHPQHPALDQQNFVYYMPA-TRQPPHGYNLQLQ 529
>ref|XP_022011776.1| RNA polymerase II degradation factor 1-like [Helianthus annuus]
gb|OTF94921.1| putative PB1 domain-containing protein [Helianthus annuus]
Length = 667
Score = 72.4 bits (176), Expect(2) = 3e-16
Identities = 51/106 (48%), Positives = 54/106 (50%)
Frame = +1
Query: 1 LASPDSVSSDGSRQKPTMIYQDPLVQIQSSNNVNRTGELXXXXXXXXXXXXRIXXXXXXX 180
LAS DSVSSDG RQKP MIYQD L+ IQSSNN NR +L
Sbjct: 365 LASTDSVSSDG-RQKPAMIYQDQLLNIQSSNN-NRASDLSNNVPDQ-------NARIQMQ 415
Query: 181 XXXXADSAYLMSMSNTQVDPXXXXXXXXXXXXXXXTAVPQPQYIQH 318
DSAY+MSMSN Q DP TAVPQPQYI H
Sbjct: 416 QQQIPDSAYVMSMSNPQADP-QHPQMHHQQPQFIHTAVPQPQYIHH 460
Score = 40.0 bits (92), Expect(2) = 3e-16
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2
Query: 371 LDQQNFVYYMPAPVRQAPQGYNMPMQ 448
LDQQNFVYYMP + AP GYNM MQ
Sbjct: 491 LDQQNFVYYMPTR-QAAPHGYNMQMQ 515
>ref|XP_022015416.1| uncharacterized protein LOC110915093 [Helianthus annuus]
gb|OTF93098.1| putative octicosapeptide/Phox/Bem1p family protein [Helianthus
annuus]
Length = 670
Score = 49.7 bits (117), Expect(2) = 2e-12
Identities = 41/116 (35%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Frame = +1
Query: 1 LASPDSVSSDG------SRQKPTMIYQDPLVQIQ-SSNNVNRTGELXXXXXXXXXXXXRI 159
L SPDSVSSDG SR++P + YQDP+ Q Q SSNNV RT + +
Sbjct: 366 LTSPDSVSSDGSLTNPLSRRQPPVTYQDPVAQTQFSSNNVVRTTD-------PSNIHDQN 418
Query: 160 XXXXXXXXXXXADSAYLMSMSNTQVDPXXXXXXXXXXXXXXXTAVPQPQYIQHXXP 327
DS Y++S TQVDP PQPQ+I P
Sbjct: 419 TRIPIQQPQQVQDSGYVISTPTTQVDPQHPQLH------------PQPQFIHVPPP 462
Score = 49.7 bits (117), Expect(2) = 2e-12
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = +2
Query: 323 YQMYXXXXXXXXXXXALDQQNFVYYMPAPVRQAPQGYNMPMQ 448
YQMY A+DQ NFVYYMPA RQ PQGYN+P+Q
Sbjct: 478 YQMYPSHSQIRAPHPAVDQHNFVYYMPA--RQPPQGYNVPLQ 517
>ref|XP_023746332.1| ataxin-2 homolog [Lactuca sativa]
gb|PLY64392.1| hypothetical protein LSAT_4X14800 [Lactuca sativa]
Length = 658
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 44/113 (38%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Frame = +1
Query: 1 LASPDSVSSDGS--RQKPTMIYQDPLVQIQ---SSNNVNRTGELXXXXXXXXXXXXRIXX 165
L SP SVSSDGS R+ P ++YQDP+ Q Q +SNN NR E +I
Sbjct: 393 LPSPGSVSSDGSITRRTPPVVYQDPVSQTQFSTNSNNNNRASEHIPSNIHDQNTRIQI-- 450
Query: 166 XXXXXXXXXADSAYLMS--MSNTQVDPXXXXXXXXXXXXXXXTAVPQPQYIQH 318
DSAYL+S + TQVD TA+P PQYIQH
Sbjct: 451 ---------QDSAYLISTPTTPTQVDQHQQHPQLHHHPQFIHTAIPPPQYIQH 494
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2
Query: 371 LDQQNFVYYMPAPVRQAP 424
LDQ NFVYYMP P Q P
Sbjct: 525 LDQHNFVYYMPPPNNQVP 542
>gb|KVI05394.1| hypothetical protein Ccrd_016282 [Cynara cardunculus var. scolymus]
Length = 643
Score = 44.7 bits (104), Expect(2) = 4e-09
Identities = 31/94 (32%), Positives = 38/94 (40%)
Frame = +1
Query: 52 MIYQDPLVQIQSSNNVNRTGELXXXXXXXXXXXXRIXXXXXXXXXXXADSAYLMSMSNTQ 231
M YQ+P+VQIQSS+N NR + + +SAYLMSM T+
Sbjct: 384 MPYQEPVVQIQSSSNNNRVVDPNDTPDQSPRIQMQ------QQQQQNQNSAYLMSMPTTK 437
Query: 232 VDPXXXXXXXXXXXXXXXTAVPQPQYIQHXXPDV 333
D VPQPQY H P V
Sbjct: 438 ADAQHPQLHHQQQLQFIHNPVPQPQYFHHHPPAV 471
Score = 43.9 bits (102), Expect(2) = 4e-09
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = +2
Query: 323 YQMYXXXXXXXXXXXALDQQNFVYYMPAPVRQAPQGYNMPMQ 448
YQMY A+DQQNFVYYMP +Q PQGYN P+Q
Sbjct: 478 YQMYQSP--------AMDQQNFVYYMPTR-QQPPQGYNFPLQ 510
>ref|XP_022021302.1| uncharacterized protein LOC110921316 [Helianthus annuus]
Length = 131
Score = 55.8 bits (133), Expect = 5e-07
Identities = 39/77 (50%), Positives = 42/77 (54%)
Frame = +1
Query: 1 LASPDSVSSDGSRQKPTMIYQDPLVQIQSSNNVNRTGELXXXXXXXXXXXXRIXXXXXXX 180
LAS DSVSSDG RQKP MIYQD L+ IQSSNN NR +L
Sbjct: 53 LASTDSVSSDG-RQKPAMIYQDQLLNIQSSNN-NRASDLSNNVSDQ-------NVRIQMQ 103
Query: 181 XXXXADSAYLMSMSNTQ 231
DSAY+MSMSN Q
Sbjct: 104 QQQIPDSAYVMSMSNPQ 120
>ref|XP_022019280.1| uncharacterized protein LOC110919317 [Helianthus annuus]
Length = 336
Score = 55.8 bits (133), Expect = 3e-06
Identities = 39/77 (50%), Positives = 42/77 (54%)
Frame = +1
Query: 1 LASPDSVSSDGSRQKPTMIYQDPLVQIQSSNNVNRTGELXXXXXXXXXXXXRIXXXXXXX 180
LAS DSVSSDG RQKP MIYQD L+ IQSSNN NR +L
Sbjct: 248 LASTDSVSSDG-RQKPVMIYQDQLLNIQSSNN-NRASDLSNNVSDQ-------NVRIQMQ 298
Query: 181 XXXXADSAYLMSMSNTQ 231
DSAY+MSMSN Q
Sbjct: 299 QQQIPDSAYVMSMSNPQ 315