BLASTX nr result

ID: Chrysanthemum21_contig00007382 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00007382
         (486 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY97505.1| hypothetical protein LSAT_1X124861 [Lactuca sativa]     67   4e-12
gb|PLY97491.1| hypothetical protein LSAT_1X124981 [Lactuca sativa]     62   5e-10
gb|KVH96916.1| hypothetical protein Ccrd_000991 [Cynara carduncu...    54   1e-06
gb|OAY26324.1| hypothetical protein MANES_16G038800 [Manihot esc...    52   3e-06

>gb|PLY97505.1| hypothetical protein LSAT_1X124861 [Lactuca sativa]
          Length = 52

 Score = 67.4 bits (163), Expect = 4e-12
 Identities = 36/51 (70%), Positives = 38/51 (74%)
 Frame = -2

Query: 404 MAGVRSLKTMKNKGTIRSATCRSIPVRGQVKVAIVLGLAHSLASFFSFNGR 252
           MAGV     MKN+  IRS+T R IP RGQVKVAIVLGL  SLASFFSFN R
Sbjct: 1   MAGVMRSDVMKNRSNIRSSTFRPIPKRGQVKVAIVLGLTQSLASFFSFNVR 51


>gb|PLY97491.1| hypothetical protein LSAT_1X124981 [Lactuca sativa]
          Length = 54

 Score = 62.0 bits (149), Expect = 5e-10
 Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
 Frame = -2

Query: 404 MAGVRSLKTMKNKGTIRSATC--RSIPVRGQVKVAIVLGLAHSLASFFSFNGR 252
           MAGVR    MKN   +R A+   R IPVRGQVK+AIVLGLA S+ASFFS NGR
Sbjct: 1   MAGVRRSAAMKNGNGVRCASGNGRPIPVRGQVKIAIVLGLAQSVASFFSSNGR 53


>gb|KVH96916.1| hypothetical protein Ccrd_000991 [Cynara cardunculus var. scolymus]
          Length = 73

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = -2

Query: 404 MAGVRSLKTMKNKGTIRSATCRSIPVRGQVKVAIVLGLAHSLASFFSFN 258
           M GVR  +T+KN  +      R +P RGQVKV IVLGLAHS+AS FSFN
Sbjct: 1   MVGVRGSRTIKNDRSAGHG--RPVPRRGQVKVGIVLGLAHSVASLFSFN 47


>gb|OAY26324.1| hypothetical protein MANES_16G038800 [Manihot esculenta]
          Length = 59

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 29/51 (56%), Positives = 36/51 (70%)
 Frame = -2

Query: 404 MAGVRSLKTMKNKGTIRSATCRSIPVRGQVKVAIVLGLAHSLASFFSFNGR 252
           MAG R+   +  +   RS++ R IP RGQVKVAIV+GLAHS+AS FS N R
Sbjct: 1   MAGARAAM-INGRKISRSSSGRPIPKRGQVKVAIVVGLAHSVASIFSLNSR 50


Top