BLASTX nr result

ID: Chrysanthemum21_contig00007205 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00007205
         (408 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022012726.1| probable methionine--tRNA ligase [Helianthus...    51   1e-07
ref|XP_023745694.1| probable methionine--tRNA ligase [Lactuca sa...    47   1e-06

>ref|XP_022012726.1| probable methionine--tRNA ligase [Helianthus annuus]
 gb|OTF95904.1| putative methionine--tRNA ligase [Helianthus annuus]
          Length = 814

 Score = 50.8 bits (120), Expect(2) = 1e-07
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 338 SFSSEVLRQLNMPLQISFSDVMVDVVKAKSPSKIIPVG 225
           SFS EVL+QLN+P Q+S SD   D+VKAKSP  IIP G
Sbjct: 533 SFSLEVLKQLNLPPQVSLSDEKGDIVKAKSPWNIIPAG 570



 Score = 32.3 bits (72), Expect(2) = 1e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -3

Query: 406 QFWKLHNKDLPSCSI 362
           QFWKL+ +DLPSCSI
Sbjct: 497 QFWKLYKEDLPSCSI 511


>ref|XP_023745694.1| probable methionine--tRNA ligase [Lactuca sativa]
          Length = 811

 Score = 47.4 bits (111), Expect(2) = 1e-06
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = -2

Query: 338 SFSSEVLRQLNMPLQISFSDVMVDVVKAKSPSKIIPVG 225
           SFS EVL+QLN+PLQ+S  D   D+ KAK+P + IP+G
Sbjct: 527 SFSIEVLKQLNLPLQLSLCDDKGDIKKAKTPWEFIPIG 564



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -3

Query: 406 QFWKLHNKDLPSCSI 362
           QFWKL+ +DLPSCSI
Sbjct: 491 QFWKLYKEDLPSCSI 505


Top