BLASTX nr result

ID: Chrysanthemum21_contig00006982 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006982
         (681 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI12440.1| hypothetical protein Ccrd_009120 [Cynara carduncu...    79   3e-13
ref|XP_023749559.1| uncharacterized protein LOC111897855 [Lactuc...    59   2e-06

>gb|KVI12440.1| hypothetical protein Ccrd_009120 [Cynara cardunculus var. scolymus]
          Length = 425

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +3

Query: 9   SAPSGSYRFDTTRVVDDKRFHQETVLPDRQDRLYAVNAIPNTLSDHNQSVGQRQDEHVNR 188
           +APS  Y +D+   ++D+RFHQET+LPDR +RLY+ N      S++NQ   QR  E   R
Sbjct: 356 AAPSSVYGYDS---MEDRRFHQETILPDRVERLYSANG-----SEYNQIEHQRGGELEIR 407

Query: 189 SAPVSSRYAFTGPSELYR 242
           SAPVSSRYAF GPS +YR
Sbjct: 408 SAPVSSRYAFAGPSVIYR 425


>ref|XP_023749559.1| uncharacterized protein LOC111897855 [Lactuca sativa]
 ref|XP_023749560.1| uncharacterized protein LOC111897855 [Lactuca sativa]
 ref|XP_023749562.1| uncharacterized protein LOC111897855 [Lactuca sativa]
 ref|XP_023749563.1| uncharacterized protein LOC111897855 [Lactuca sativa]
 gb|PLY61772.1| hypothetical protein LSAT_8X55141 [Lactuca sativa]
          Length = 566

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +3

Query: 15  PSGSYRFDTTRVVDDK-RFHQETVLPDRQDRLYAVNAIPNTLSDHNQSVGQRQDEHVNRS 191
           PS SY++D   V + + RF QET+L DR +RLY+VN       +  Q++G  Q E+    
Sbjct: 499 PSTSYQYDNISVENSEGRFRQETILSDRVERLYSVN-------EQQQNIG--QGEYSRSG 549

Query: 192 APVSSRYAFTGPSELYR 242
             VSSRYAF GPS ++R
Sbjct: 550 GAVSSRYAFVGPSVVHR 566


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