BLASTX nr result

ID: Chrysanthemum21_contig00006939 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006939
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023759666.1| structure-specific endonuclease subunit slx1...    65   3e-10
ref|XP_022012028.1| structure-specific endonuclease subunit slx1...    64   7e-10
gb|KVH89356.1| hypothetical protein Ccrd_008657 [Cynara carduncu...    54   7e-06

>ref|XP_023759666.1| structure-specific endonuclease subunit slx1 [Lactuca sativa]
 gb|PLY88661.1| hypothetical protein LSAT_7X34400 [Lactuca sativa]
          Length = 167

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 32/62 (51%), Positives = 36/62 (58%)
 Frame = +1

Query: 1   FESKSEACKFEYIWXXXXXXXXXXXXXXXXXXXXXXQHRIAALEKVKGSLDCSDLEFDWR 180
           FESKSEACKFE+ W                      QHR AALEKVKGS DC+ LEFDW+
Sbjct: 104 FESKSEACKFEFKWKNISRKMGRKRNSKDEGGLYLLQHRNAALEKVKGSTDCNHLEFDWK 163

Query: 181 LE 186
           L+
Sbjct: 164 LQ 165


>ref|XP_022012028.1| structure-specific endonuclease subunit slx1 [Helianthus annuus]
 gb|OTF95196.1| putative excinuclease ABC, C subunit [Helianthus annuus]
          Length = 158

 Score = 63.9 bits (154), Expect = 7e-10
 Identities = 31/62 (50%), Positives = 36/62 (58%)
 Frame = +1

Query: 1   FESKSEACKFEYIWXXXXXXXXXXXXXXXXXXXXXXQHRIAALEKVKGSLDCSDLEFDWR 180
           FESKSEACKFE+ W                      QHR AAL+KVKGS+DC  LEFDW+
Sbjct: 95  FESKSEACKFEFKWKSVSSKMTRKKNSKDDGGLHLLQHRNAALQKVKGSIDCIHLEFDWK 154

Query: 181 LE 186
           L+
Sbjct: 155 LQ 156


>gb|KVH89356.1| hypothetical protein Ccrd_008657 [Cynara cardunculus var. scolymus]
          Length = 196

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 30/63 (47%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 1   FESKSEACKFEYIWXXXXXXXXXXXXXXXXXXXXXX-QHRIAALEKVKGSLDCSDLEFDW 177
           F SKSEACKFE+ W                       QHR AAL KVK S DCS LEF+W
Sbjct: 132 FASKSEACKFEFKWKNVSSKMPRKRKSKEEEGGIHLLQHRNAALNKVKDSSDCSHLEFEW 191

Query: 178 RLE 186
           +LE
Sbjct: 192 KLE 194


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