BLASTX nr result

ID: Chrysanthemum21_contig00006937 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006937
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023759666.1| structure-specific endonuclease subunit slx1...    59   1e-07
gb|KVH89356.1| hypothetical protein Ccrd_008657 [Cynara carduncu...    57   1e-06
ref|XP_022012028.1| structure-specific endonuclease subunit slx1...    55   2e-06

>ref|XP_023759666.1| structure-specific endonuclease subunit slx1 [Lactuca sativa]
 gb|PLY88661.1| hypothetical protein LSAT_7X34400 [Lactuca sativa]
          Length = 167

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 34/52 (65%)
 Frame = -1

Query: 489 EYKWKNVSRKTSRKKKPXXXXXXXXXXXHRNAALERLKGSVDCSGLEFDWKL 334
           E+KWKN+SRK  RK+              RNAALE++KGS DC+ LEFDWKL
Sbjct: 114 EFKWKNISRKMGRKRNSKDEGGLYLLQH-RNAALEKVKGSTDCNHLEFDWKL 164


>gb|KVH89356.1| hypothetical protein Ccrd_008657 [Cynara cardunculus var. scolymus]
          Length = 196

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 33/52 (63%)
 Frame = -1

Query: 489 EYKWKNVSRKTSRKKKPXXXXXXXXXXXHRNAALERLKGSVDCSGLEFDWKL 334
           E+KWKNVS K  RK+K            HRNAAL ++K S DCS LEF+WKL
Sbjct: 142 EFKWKNVSSKMPRKRKSKEEEGGIHLLQHRNAALNKVKDSSDCSHLEFEWKL 193


>ref|XP_022012028.1| structure-specific endonuclease subunit slx1 [Helianthus annuus]
 gb|OTF95196.1| putative excinuclease ABC, C subunit [Helianthus annuus]
          Length = 158

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = -1

Query: 489 EYKWKNVSRKTSRKKKPXXXXXXXXXXXHRNAALERLKGSVDCSGLEFDWKL 334
           E+KWK+VS K +RKK              RNAAL+++KGS+DC  LEFDWKL
Sbjct: 105 EFKWKSVSSKMTRKKNSKDDGGLHLLQH-RNAALQKVKGSIDCIHLEFDWKL 155


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