BLASTX nr result

ID: Chrysanthemum21_contig00006812 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006812
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89346.1| hypothetical protein Ccrd_008667, partial [Cynara...    84   3e-17
ref|XP_023742548.1| glycine-rich protein A3-like [Lactuca sativa]      79   6e-16
gb|PLY96678.1| hypothetical protein LSAT_7X33381 [Lactuca sativa]      79   9e-15

>gb|KVH89346.1| hypothetical protein Ccrd_008667, partial [Cynara cardunculus var.
           scolymus]
          Length = 196

 Score = 83.6 bits (205), Expect = 3e-17
 Identities = 58/124 (46%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
 Frame = +2

Query: 35  LLL*GIRMAVILLMVDIRH--MLILHMVXXXXXXXXXXXXTVIQGTEVTNMEWEHFLPEV 208
           LLL      +ILLM DIRH  M +   +             VIQG E TN + EH L EV
Sbjct: 69  LLLEDTHKLIILLMADIRHRHMFVPCPMLILRQPIMVHRLHVIQGMEATNTDSEHSLLEV 128

Query: 209 QQLWQLHMELTICLIMATGHMVT-DTTAIIITMENLSTTSSSVRSLARDGSMEGFMGGTK 385
           Q+ W+LH+ LTI   M TG MV   TT II  M  +S  SSS +SLA  GS+EG+ G TK
Sbjct: 129 QRQWRLHVALTI-RPMVTGLMVVMGTTGII--MVGISMVSSSTQSLASAGSIEGYTGNTK 185

Query: 386 CGNE 397
           CGN+
Sbjct: 186 CGND 189


>ref|XP_023742548.1| glycine-rich protein A3-like [Lactuca sativa]
          Length = 154

 Score = 79.0 bits (193), Expect = 6e-16
 Identities = 42/101 (41%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
 Frame = +1

Query: 97  YPSH-----GAYPPTAYPASSTHCYSGHGGHKHGMGTFLXXXXXXXXXXXXXXXXXXXXX 261
           YP H     G YPP AYPASS   YSGHG H HG+GTFL                     
Sbjct: 53  YPPHVCPPAGGYPPVAYPASSAPYYSGHGRHGHGVGTFLAGGAAAVAASYGAHHMPHHGY 112

Query: 262 XXXXXXXXXXXXXXXXXXXXXFKRAKFGKRWKHGGFYGRHK 384
                                FK AKFGKRWKHGG YG+HK
Sbjct: 113 GSHGYGYNYGYHHHGKYKHGKFKHAKFGKRWKHGGMYGKHK 153


>gb|PLY96678.1| hypothetical protein LSAT_7X33381 [Lactuca sativa]
          Length = 324

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 42/101 (41%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
 Frame = +1

Query: 97  YPSH-----GAYPPTAYPASSTHCYSGHGGHKHGMGTFLXXXXXXXXXXXXXXXXXXXXX 261
           YP H     G YPP AYPASS   YSGHG H HG+GTFL                     
Sbjct: 223 YPPHVCPPAGGYPPVAYPASSAPYYSGHGRHGHGVGTFLAGGAAAVAASYGAHHMPHHGY 282

Query: 262 XXXXXXXXXXXXXXXXXXXXXFKRAKFGKRWKHGGFYGRHK 384
                                FK AKFGKRWKHGG YG+HK
Sbjct: 283 GSHGYGYNYGYHHHGKYKHGKFKHAKFGKRWKHGGMYGKHK 323


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