BLASTX nr result

ID: Chrysanthemum21_contig00006483 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006483
         (643 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023773234.1| VAN3-binding protein [Lactuca sativa]              47   4e-06

>ref|XP_023773234.1| VAN3-binding protein [Lactuca sativa]
          Length = 453

 Score = 47.4 bits (111), Expect(2) = 4e-06
 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
 Frame = +2

Query: 317 VKSHCDIVTL--ASATGFYGAATLKSKVLNKLWNITAAIPM 433
           VKSH DI+TL  A+AT   GAATLK++ L ++WNI A IP+
Sbjct: 259 VKSHGDILTLTAAAATALRGAATLKARALKEVWNIAAVIPV 299



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 226 TLATTVYPAFKSTKVMGAEREHLIVVVNS 312
           T+A       ++ + MGAEREHLI  VNS
Sbjct: 227 TIAAAAAQCVEAAEAMGAEREHLIAAVNS 255


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