BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006305
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD89597.1| RNA polymerase II, second largest subunit, parti...   277   1e-91
emb|CAD89878.1| RNA polymerase II, second largest subunit, parti...   277   1e-91
emb|CAD98812.1| RNA polymerase II, second largest subunit, parti...   274   5e-91
emb|CAD88886.1| DNA-directed RNA polymerase subunit B, partial [...   274   1e-90
emb|CAD89877.1| RNA polymerase II, second largest subunit, parti...   274   2e-90
emb|CAD90163.1| DNA-directed RNA polymerase II largest subunit, ...   272   8e-90
gb|AJS14124.1| RNA polymerase II second largest subunit, partial...   269   2e-89
emb|CAD92461.1| RNA polymerase II, partial [Valeriana officinalis]    272   4e-89
emb|CAD89687.1| RNA polymerase II, second largest subunit, parti...   270   5e-89
emb|CAD88979.1| DNA-directed RNA polymerase subunit B, partial [...   270   6e-89
emb|CAD89519.1| RNA polymerase II second largest subunit, partia...   272   8e-89
gb|AJS14101.1| RNA polymerase II second largest subunit, partial...   268   2e-88
emb|CAD89598.1| RNA polymerase II, second largest subunit, parti...   270   3e-88
emb|CAD89599.1| RNA polymerase II, second largest subunit, parti...   270   3e-88
gb|AAS86836.1| RNA polymerase II second largest subunit, partial...   268   4e-88
emb|CAD88980.1| DNA-directed RNA polymerase subunit B, partial [...   270   5e-88
gb|PIN19739.1| DNA-directed RNA polymerase [Handroanthus impetig...   274   6e-88
emb|CAD89691.1| RNA polymerase II, second largest subunit, parti...   273   7e-88
gb|AAW22927.1| RNA polymerase II second largest subunit, partial...   274   1e-87
emb|CAD98811.2| RNA polymerase II, second largest subunit, parti...   274   1e-87

>emb|CAD89597.1| RNA polymerase II, second largest subunit, partial [Senecio
           vulgaris]
          Length = 325

 Score =  277 bits (709), Expect = 1e-91
 Identities = 134/135 (99%), Positives = 135/135 (100%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 8   IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 68  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRVGGEDVIIGK
Sbjct: 128 PPGTRVGGEDVIIGK 142


>emb|CAD89878.1| RNA polymerase II, second largest subunit, partial [Doronicum
           orientale]
          Length = 326

 Score =  277 bits (709), Expect = 1e-91
 Identities = 134/135 (99%), Positives = 135/135 (100%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 10  IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 69

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 70  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 129

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRVGGEDVIIGK
Sbjct: 130 PPGTRVGGEDVIIGK 144


>emb|CAD98812.1| RNA polymerase II, second largest subunit, partial [Gardenia sp.
           Oxelman 2319]
          Length = 280

 Score =  274 bits (700), Expect = 5e-91
 Identities = 132/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 27  IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 86

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA
Sbjct: 87  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 146

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 147 PPGTRVSGEDVIIGK 161


>emb|CAD88886.1| DNA-directed RNA polymerase subunit B, partial [Stellaria media]
          Length = 302

 Score =  274 bits (700), Expect = 1e-90
 Identities = 132/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 8   IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA
Sbjct: 68  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 128 PPGTRVSGEDVIIGK 142


>emb|CAD89877.1| RNA polymerase II, second largest subunit, partial [Philadelphus
           sp. Oxelman 2326]
          Length = 320

 Score =  274 bits (700), Expect = 2e-90
 Identities = 132/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 8   IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 68  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 128 PPGTRVSGEDVIIGK 142


>emb|CAD90163.1| DNA-directed RNA polymerase II largest subunit, partial
           [Convolvulus arvensis]
          Length = 321

 Score =  272 bits (696), Expect = 8e-90
 Identities = 131/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 8   IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLD+DGLA
Sbjct: 68  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDEDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 128 PPGTRVSGEDVIIGK 142


>gb|AJS14124.1| RNA polymerase II second largest subunit, partial [Phanerodiscus
           perrieri]
          Length = 245

 Score =  269 bits (687), Expect = 2e-89
 Identities = 129/135 (95%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 83  IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 142

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R++TMGMRHGSYDKLDDDGLA
Sbjct: 143 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRTDTMGMRHGSYDKLDDDGLA 202

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 203 PPGTRVSGEDVIIGK 217


>emb|CAD92461.1| RNA polymerase II, partial [Valeriana officinalis]
          Length = 364

 Score =  272 bits (695), Expect = 4e-89
 Identities = 132/135 (97%), Positives = 133/135 (98%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 16  IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 75

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 76  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 135

Query: 47  PPGTRVGGEDVIIGK 3
           P GTRV GEDVIIGK
Sbjct: 136 PAGTRVSGEDVIIGK 150


>emb|CAD89687.1| RNA polymerase II, second largest subunit, partial [Ilex x
           meserveae]
          Length = 322

 Score =  270 bits (691), Expect = 5e-89
 Identities = 129/135 (95%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVL+YPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 8   IYVTNYQFRMDTLAYVLFYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 68  IMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 128 PPGTRVSGEDVIIGK 142


>emb|CAD88979.1| DNA-directed RNA polymerase subunit B, partial [Cornus kousa]
          Length = 317

 Score =  270 bits (690), Expect = 6e-89
 Identities = 129/135 (95%), Positives = 133/135 (98%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+Q RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 8   IYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 68  IMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 128 PPGTRVSGEDVIIGK 142


>emb|CAD89519.1| RNA polymerase II second largest subunit, partial [Davidia
           involucrata]
          Length = 396

 Score =  272 bits (696), Expect = 8e-89
 Identities = 130/135 (96%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 227 IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 286

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 287 IMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 346

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 347 PPGTRVSGEDVIIGK 361


>gb|AJS14101.1| RNA polymerase II second largest subunit, partial [Comandra
           umbellata]
          Length = 298

 Score =  268 bits (685), Expect = 2e-88
 Identities = 129/135 (95%), Positives = 133/135 (98%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 158 IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 217

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDGLA
Sbjct: 218 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMRHGSYDKLDDDGLA 277

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 278 PPGTRVSGEDVIIGK 292


>emb|CAD89598.1| RNA polymerase II, second largest subunit, partial [Borago
           officinalis]
          Length = 355

 Score =  270 bits (689), Expect = 3e-88
 Identities = 130/134 (97%), Positives = 132/134 (98%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 8   IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRD EKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 68  IMNQSSIDRGFFRSLFFRSYRDXEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIG 6
           PPGTRV GEDVIIG
Sbjct: 128 PPGTRVAGEDVIIG 141


>emb|CAD89599.1| RNA polymerase II, second largest subunit, partial [Borago
           officinalis]
          Length = 355

 Score =  270 bits (689), Expect = 3e-88
 Identities = 130/135 (96%), Positives = 133/135 (98%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 8   IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKM TLV+EDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 68  IMNQSSIDRGFFRSLFFRSYRDEEKKMETLVREDFGRPDRANTMGMRHGSYDKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 128 PPGTRVAGEDVIIGK 142


>gb|AAS86836.1| RNA polymerase II second largest subunit, partial [Teucrium
           fruticans]
          Length = 336

 Score =  268 bits (686), Expect = 4e-88
 Identities = 129/135 (95%), Positives = 133/135 (98%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 23  IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 82

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR++ MGMRHGSYDKLDDDGLA
Sbjct: 83  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASCMGMRHGSYDKLDDDGLA 142

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 143 PPGTRVSGEDVIIGK 157


>emb|CAD88980.1| DNA-directed RNA polymerase subunit B, partial [Vicia sativa]
          Length = 401

 Score =  270 bits (691), Expect = 5e-88
 Identities = 130/135 (96%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV
Sbjct: 8   IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 67

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR++TMGMRHGSY+KLDDDGLA
Sbjct: 68  IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYEKLDDDGLA 127

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 128 PPGTRVSGEDVIIGK 142


>gb|PIN19739.1| DNA-directed RNA polymerase [Handroanthus impetiginosus]
          Length = 515

 Score =  274 bits (700), Expect = 6e-88
 Identities = 132/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 66  IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 125

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA
Sbjct: 126 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 185

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 186 PPGTRVAGEDVIIGK 200


>emb|CAD89691.1| RNA polymerase II, second largest subunit, partial [Escallonia sp.
           Oxelman 2340]
          Length = 508

 Score =  273 bits (699), Expect = 7e-88
 Identities = 131/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 164 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 223

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLA
Sbjct: 224 IMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLA 283

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 284 PPGTRVSGEDVIIGK 298


>gb|AAW22927.1| RNA polymerase II second largest subunit, partial [Dianthus sp.
           UWG]
          Length = 540

 Score =  274 bits (700), Expect = 1e-87
 Identities = 132/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 227 IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 286

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA
Sbjct: 287 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 346

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 347 PPGTRVSGEDVIIGK 361


>emb|CAD98811.2| RNA polymerase II, second largest subunit, partial [Gardenia sp.
           Oxelman 2319]
          Length = 545

 Score =  274 bits (700), Expect = 1e-87
 Identities = 132/135 (97%), Positives = 134/135 (99%)
 Frame = -1

Query: 407 IYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSV 228
           IYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSV
Sbjct: 226 IYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 285

Query: 227 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 48
           IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA
Sbjct: 286 IMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLA 345

Query: 47  PPGTRVGGEDVIIGK 3
           PPGTRV GEDVIIGK
Sbjct: 346 PPGTRVSGEDVIIGK 360