BLASTX nr result

ID: Chrysanthemum21_contig00006234 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006234
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022020520.1| rho GTPase-activating protein REN1-like isof...    72   9e-12
ref|XP_022020507.1| rho GTPase-activating protein REN1-like isof...    72   9e-12
gb|KVH88155.1| Rho GTPase-activating protein domain-containing p...    55   5e-06

>ref|XP_022020520.1| rho GTPase-activating protein REN1-like isoform X2 [Helianthus
           annuus]
          Length = 728

 Score = 72.0 bits (175), Expect = 9e-12
 Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
 Frame = -1

Query: 446 YPTNTKGPVTIRSRTISHKVTNEASRKLKSSCHVRSVSQFAGSFPDQSNNDLPTRKELEN 267
           Y  NTK P T+RS TI+H+   + S K K   H RS+S+   +  +Q  +++ TRK +E+
Sbjct: 484 YQKNTKRPTTLRSHTIAHREVIKKS-KSKPKSHARSISEVPDNVSNQIGDNI-TRKTVEH 541

Query: 266 FGRLESDNVQPKTSKQLTDNIQISSTTADGATDMQHTDAKESLKVD--KKGGEVKRPE 99
             R E++N Q  T+++L+D+IQ SSTTAD   + +H   +  +  D  K+  + K  E
Sbjct: 542 GTRPENENAQQSTNRELSDDIQRSSTTADSRGNTKHATQQTDVTPDATKEESQAKNEE 599


>ref|XP_022020507.1| rho GTPase-activating protein REN1-like isoform X1 [Helianthus
           annuus]
 ref|XP_022020514.1| rho GTPase-activating protein REN1-like isoform X1 [Helianthus
           annuus]
 gb|OTG34538.1| putative rho GTPase activation protein, PH domain-like protein
           [Helianthus annuus]
          Length = 730

 Score = 72.0 bits (175), Expect = 9e-12
 Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
 Frame = -1

Query: 446 YPTNTKGPVTIRSRTISHKVTNEASRKLKSSCHVRSVSQFAGSFPDQSNNDLPTRKELEN 267
           Y  NTK P T+RS TI+H+   + S K K   H RS+S+   +  +Q  +++ TRK +E+
Sbjct: 484 YQKNTKRPTTLRSHTIAHREVIKKS-KSKPKSHARSISEVPDNVSNQIGDNI-TRKTVEH 541

Query: 266 FGRLESDNVQPKTSKQLTDNIQISSTTADGATDMQHTDAKESLKVD--KKGGEVKRPE 99
             R E++N Q  T+++L+D+IQ SSTTAD   + +H   +  +  D  K+  + K  E
Sbjct: 542 GTRPENENAQQSTNRELSDDIQRSSTTADSRGNTKHATQQTDVTPDATKEESQAKNEE 599


>gb|KVH88155.1| Rho GTPase-activating protein domain-containing protein, partial
           [Cynara cardunculus var. scolymus]
          Length = 239

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 36/71 (50%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = -1

Query: 431 KGPVTIRSRTISHKVTN--EASRKLKSSCHVRSVSQFAGSFPDQSNNDLPTRKELENFGR 258
           KGP T  SR+ISHKVT   EA +KL+SS   RSV Q   +  +QS ND  TRK +E    
Sbjct: 144 KGPGTFSSRSISHKVTGDVEAVKKLRSSSKGRSVCQVGDNVSNQS-NDHSTRKAVEYVKI 202

Query: 257 LESDNVQPKTS 225
            E DN Q K+S
Sbjct: 203 SEDDNAQKKSS 213


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