BLASTX nr result

ID: Chrysanthemum21_contig00006178 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00006178
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023746126.1| uncharacterized protein LOC111894280 [Lactuc...    84   2e-16
ref|XP_021969226.1| uncharacterized protein LOC110864465 [Helian...    70   2e-11
gb|KVH95345.1| hypothetical protein Ccrd_002596 [Cynara carduncu...    65   1e-09

>ref|XP_023746126.1| uncharacterized protein LOC111894280 [Lactuca sativa]
 ref|XP_023746127.1| uncharacterized protein LOC111894280 [Lactuca sativa]
          Length = 381

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 52/94 (55%), Positives = 57/94 (60%), Gaps = 12/94 (12%)
 Frame = -3

Query: 248 HSADVDPEAKKNIDAGLVSEVKTT-----PDPKVSLNATSNTLGSNVETKQPDFKEKPKV 84
           H AD DP  KKN + GL SE  TT     P PKVSLN  S+  GSN+E+KQ D  EKPKV
Sbjct: 19  HCADPDPVVKKNPNDGLGSETTTTTTTSNPKPKVSLNEKSSASGSNLESKQADPLEKPKV 78

Query: 83  SN-------DKEKPKSVPSKDAGVTQTGNVLKDS 3
           SN       DK K KSVPSK  G  + GNV KDS
Sbjct: 79  SNDIQNPTVDKAKIKSVPSKPLGDKEAGNVQKDS 112


>ref|XP_021969226.1| uncharacterized protein LOC110864465 [Helianthus annuus]
 gb|OTG21980.1| hypothetical protein HannXRQ_Chr06g0166511 [Helianthus annuus]
          Length = 374

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
 Frame = -3

Query: 248 HSADVDPEAKKNIDAGLVSEVKTTPDPKVSLNATSNTLGSNVETK--QPDFKEKPKVSND 75
           H  + DPE KKN    L +E +T  DPKV+LN  S+T GSN+E+K   PD  +K KVSND
Sbjct: 20  HCVNSDPEVKKNAHDDLGTETRTKTDPKVALNENSSTSGSNIESKPVNPDPSKKDKVSND 79

Query: 74  ------KEKPKSVPSKDAGVTQTGNVLKDS 3
                  +  KSVPSK     +TGN+ K S
Sbjct: 80  VTNGNVDKTTKSVPSKPLVDKETGNLQKGS 109


>gb|KVH95345.1| hypothetical protein Ccrd_002596 [Cynara cardunculus var. scolymus]
          Length = 369

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
 Frame = -3

Query: 248 HSADVDPEAKKNIDAGLVSEVKTTPDPKVSLNATSNTLGSNVETKQPDFKEKPKVSND-- 75
           H AD D E KKN    L S+  TT + KV LN  S+T GSN+E+++ D  EK K SND  
Sbjct: 19  HCADTDLEVKKNTHDDLGSKT-TTSNRKVGLNDKSSTSGSNLESEKADASEKAKFSNDIP 77

Query: 74  ---KEKPKSVPSKDAGVTQTGNVLKDS 3
               +K KSVPSK  G  + GNV  DS
Sbjct: 78  NASVDKTKSVPSKLLGDGEAGNVKTDS 104


Top