BLASTX nr result

ID: Chrysanthemum21_contig00005783 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00005783
         (361 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021970997.1| extensin isoform X2 [Helianthus annuus]            57   4e-07
ref|XP_021970996.1| vegetative cell wall protein gp1 isoform X1 ...    57   4e-07
gb|OTG23640.1| putative hydroxyproline-rich glycoprotein family ...    57   4e-07
gb|KVI07819.1| hypothetical protein Ccrd_013816 [Cynara carduncu...    55   2e-06

>ref|XP_021970997.1| extensin isoform X2 [Helianthus annuus]
          Length = 344

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 31/56 (55%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +3

Query: 147 VQHNRGHIXXXXXXXXXXXXXXXXA-LPPHYSSQPP-SVVQPTMSAASTPLQQPLH 308
           +QHNRGHI                A LPP YS+QPP SV+QPTM  AS PLQQPLH
Sbjct: 104 IQHNRGHINAQLVPPMPSPQPSNMAALPPQYSTQPPPSVIQPTMPPASVPLQQPLH 159


>ref|XP_021970996.1| vegetative cell wall protein gp1 isoform X1 [Helianthus annuus]
          Length = 370

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 31/56 (55%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +3

Query: 147 VQHNRGHIXXXXXXXXXXXXXXXXA-LPPHYSSQPP-SVVQPTMSAASTPLQQPLH 308
           +QHNRGHI                A LPP YS+QPP SV+QPTM  AS PLQQPLH
Sbjct: 130 IQHNRGHINAQLVPPMPSPQPSNMAALPPQYSTQPPPSVIQPTMPPASVPLQQPLH 185


>gb|OTG23640.1| putative hydroxyproline-rich glycoprotein family protein
           [Helianthus annuus]
          Length = 413

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 31/56 (55%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +3

Query: 147 VQHNRGHIXXXXXXXXXXXXXXXXA-LPPHYSSQPP-SVVQPTMSAASTPLQQPLH 308
           +QHNRGHI                A LPP YS+QPP SV+QPTM  AS PLQQPLH
Sbjct: 130 IQHNRGHINAQLVPPMPSPQPSNMAALPPQYSTQPPPSVIQPTMPPASVPLQQPLH 185


>gb|KVI07819.1| hypothetical protein Ccrd_013816 [Cynara cardunculus var. scolymus]
          Length = 508

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 219 ALPPHYSSQPPSVVQPTMSAASTPLQQPLH 308
           ALPPHYSSQ PS +QPTM A +TPLQQPLH
Sbjct: 169 ALPPHYSSQAPSALQPTMPAVTTPLQQPLH 198


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